RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 GLIPR2Q9H4G4 154 aa19.3■□□□□ 0.68
CHRNA3-202ENST00000348639 LIN28AQ9H9Z2 209 aaKnown RBP19.3■□□□□ 0.68
CHRNA3-202ENST00000348639 ZSCAN32Q9NX65 697 aa19.3■□□□□ 0.68
CHRNA3-202ENST00000348639 MMP17Q9ULZ9 603 aa19.3■□□□□ 0.68
CHRNA3-202ENST00000348639 NAALAD2Q9Y3Q0 740 aa19.3■□□□□ 0.68
CHRNA3-202ENST00000348639 MYO10Q9HD67 2058 aa19.3■□□□□ 0.68
CHRNA3-202ENST00000348639 HMGN4O00479 90 aa19.29■□□□□ 0.68
CHRNA3-202ENST00000348639 SEC14L2O76054 403 aa19.29■□□□□ 0.68
CHRNA3-202ENST00000348639 RASGRP1O95267 797 aa19.29■□□□□ 0.68
CHRNA3-202ENST00000348639 BCHEP06276 602 aa19.29■□□□□ 0.68
CHRNA3-202ENST00000348639 EPHA2P29317 976 aa19.29■□□□□ 0.68
CHRNA3-202ENST00000348639 ACTR1BP42025 376 aa19.29■□□□□ 0.68
CHRNA3-202ENST00000348639 TSFMP43897 325 aaKnown RBP19.29■□□□□ 0.68
CHRNA3-202ENST00000348639 CXCR4P61073 352 aa19.29■□□□□ 0.68
CHRNA3-202ENST00000348639 ACTR1AP61163 376 aa19.29■□□□□ 0.68
CHRNA3-202ENST00000348639 TUBA3CQ13748 450 aa19.29■□□□□ 0.68
CHRNA3-202ENST00000348639 CCINQ13939 588 aa19.29■□□□□ 0.68
CHRNA3-202ENST00000348639 FBXO43Q4G163 708 aa19.29■□□□□ 0.68
CHRNA3-202ENST00000348639 GPR107Q5VW38 600 aa19.29■□□□□ 0.68
CHRNA3-202ENST00000348639 BPIFB6Q8NFQ5 453 aa19.29■□□□□ 0.68
CHRNA3-202ENST00000348639 PIP5K1AQ99755 562 aa19.29■□□□□ 0.68
CHRNA3-202ENST00000348639 PNMA8BQ9ULN7 279 aaPredicted RBP19.29■□□□□ 0.68
CHRNA3-202ENST00000348639 KLHL20Q9Y2M5 609 aa19.29■□□□□ 0.68
CHRNA3-202ENST00000348639 SH3GLB1Q9Y371 365 aa19.29■□□□□ 0.68
CHRNA3-202ENST00000348639 SH3BP5O60239 455 aa19.29■□□□□ 0.68
CHRNA3-202ENST00000348639 AKT2P31751 481 aa19.29■□□□□ 0.68
CHRNA3-202ENST00000348639 YPEL5P62699 121 aa19.29■□□□□ 0.68
CHRNA3-202ENST00000348639 DUSP7Q16829 419 aa19.29■□□□□ 0.68
CHRNA3-202ENST00000348639 CYP27C1Q4G0S4 372 aa19.29■□□□□ 0.68
CHRNA3-202ENST00000348639 TMEM19Q96HH6 336 aa19.29■□□□□ 0.68
CHRNA3-202ENST00000348639 MAGED4Q96JG8 741 aa19.29■□□□□ 0.68
CHRNA3-202ENST00000348639 FEVQ99581 238 aa19.29■□□□□ 0.68
CHRNA3-202ENST00000348639 SRMSQ9H3Y6 488 aa19.29■□□□□ 0.68
CHRNA3-202ENST00000348639 PAK1IP1Q9NWT1 392 aaPredicted RBP19.29■□□□□ 0.68
CHRNA3-202ENST00000348639 PCDHGA2Q9Y5H1 932 aa19.29■□□□□ 0.68
CHRNA3-202ENST00000348639 ENPP4Q9Y6X5 453 aa19.29■□□□□ 0.68
CHRNA3-202ENST00000348639 A0A1W2PR48 441 aa19.28■□□□□ 0.68
CHRNA3-202ENST00000348639 A6NCN8 305 aa19.28■□□□□ 0.68
CHRNA3-202ENST00000348639 A8MVJ9 347 aa19.28■□□□□ 0.68
CHRNA3-202ENST00000348639 ANXA8P13928 327 aa19.28■□□□□ 0.68
CHRNA3-202ENST00000348639 JUNDP17535 347 aa19.28■□□□□ 0.68
CHRNA3-202ENST00000348639 NTSP30990 170 aa19.28■□□□□ 0.68
CHRNA3-202ENST00000348639 HMGA2P52926 109 aa19.28■□□□□ 0.68
CHRNA3-202ENST00000348639 CDH12P55289 794 aa19.28■□□□□ 0.68
CHRNA3-202ENST00000348639 SRP54P61011 504 aaKnown RBP19.28■□□□□ 0.68
CHRNA3-202ENST00000348639 STXBP1P61764 594 aaKnown RBP19.28■□□□□ 0.68
CHRNA3-202ENST00000348639 RPP38P78345 283 aaKnown RBP19.28■□□□□ 0.68
CHRNA3-202ENST00000348639 KCNC4Q03721 635 aa19.28■□□□□ 0.68
CHRNA3-202ENST00000348639 TP53BP2Q13625 1128 aa19.28■□□□□ 0.68
CHRNA3-202ENST00000348639 MICAQ29983 383 aa19.28■□□□□ 0.68
CHRNA3-202ENST00000348639 B3GNT8Q7Z7M8 397 aa19.28■□□□□ 0.68
CHRNA3-202ENST00000348639 ZNF605Q86T29 641 aa19.28■□□□□ 0.68
CHRNA3-202ENST00000348639 PAQR7Q86WK9 346 aa19.28■□□□□ 0.68
CHRNA3-202ENST00000348639 OR10G2Q8NGC3 310 aa19.28■□□□□ 0.68
CHRNA3-202ENST00000348639 RAB8BQ92930 207 aa19.28■□□□□ 0.68
CHRNA3-202ENST00000348639 SLC22A18Q96BI1 424 aa19.28■□□□□ 0.68
CHRNA3-202ENST00000348639 NODALQ96S42 347 aa19.28■□□□□ 0.68
CHRNA3-202ENST00000348639 TTYH1Q9H313 450 aaPredicted RBP19.28■□□□□ 0.68
CHRNA3-202ENST00000348639 SYNPO2LQ9H987 977 aa19.28■□□□□ 0.68
CHRNA3-202ENST00000348639 TMEM9Q9P0T7 183 aa19.28■□□□□ 0.68
CHRNA3-202ENST00000348639 FAM32AQ9Y421 112 aaKnown RBP19.28■□□□□ 0.68
CHRNA3-202ENST00000348639 ZNF451Q9Y4E5 1061 aa19.28■□□□□ 0.68
CHRNA3-202ENST00000348639 ATG4BQ9Y4P1 393 aa19.28■□□□□ 0.68
CHRNA3-202ENST00000348639 PTGES3LE9PB15 166 aa19.27■□□□□ 0.68
CHRNA3-202ENST00000348639 BTN3A3O00478 584 aa19.27■□□□□ 0.68
CHRNA3-202ENST00000348639 PDE9AO76083 593 aa19.27■□□□□ 0.68
CHRNA3-202ENST00000348639 RECKO95980 971 aa19.27■□□□□ 0.68
CHRNA3-202ENST00000348639 RHCEP18577 417 aa19.27■□□□□ 0.68
CHRNA3-202ENST00000348639 SLC19A1P41440 591 aa19.27■□□□□ 0.68
CHRNA3-202ENST00000348639 MAPK11Q15759 364 aa19.27■□□□□ 0.68
CHRNA3-202ENST00000348639 RPS26P11Q5JNZ5 115 aaPredicted RBP19.27■□□□□ 0.68
CHRNA3-202ENST00000348639 SLC5A8Q8N695 610 aa19.27■□□□□ 0.68
CHRNA3-202ENST00000348639 HRASLS5Q96KN8 279 aa19.27■□□□□ 0.68
CHRNA3-202ENST00000348639 BBS4Q96RK4 519 aa19.27■□□□□ 0.68
CHRNA3-202ENST00000348639 ACER3Q9NUN7 267 aa19.27■□□□□ 0.68
CHRNA3-202ENST00000348639 TRNAU1APQ9NX07 287 aaKnown RBP19.27■□□□□ 0.68
CHRNA3-202ENST00000348639 APOBEC3BQ9UH17 382 aaKnown RBP19.27■□□□□ 0.68
CHRNA3-202ENST00000348639 SNX5Q9Y5X3 404 aa19.27■□□□□ 0.68
CHRNA3-202ENST00000348639 SHISA7A6NL88 538 aa19.27■□□□□ 0.67
CHRNA3-202ENST00000348639 WASHC1A8K0Z3 465 aa19.27■□□□□ 0.67
CHRNA3-202ENST00000348639 H3BMQ9 156 aa19.27■□□□□ 0.67
CHRNA3-202ENST00000348639 J3KTA2 159 aa19.27■□□□□ 0.67
CHRNA3-202ENST00000348639 XPNPEP2O43895 674 aa19.27■□□□□ 0.67
CHRNA3-202ENST00000348639 PRKRAO75569 313 aaKnown RBP19.27■□□□□ 0.67
CHRNA3-202ENST00000348639 SNRNP200O75643 2136 aaKnown RBP19.27■□□□□ 0.67
CHRNA3-202ENST00000348639 MFN2O95140 757 aa19.27■□□□□ 0.67
CHRNA3-202ENST00000348639 SEMA4FO95754 770 aa19.27■□□□□ 0.67
CHRNA3-202ENST00000348639 IFNW1P05000 195 aa19.27■□□□□ 0.67
CHRNA3-202ENST00000348639 F3P13726 295 aa19.27■□□□□ 0.67
CHRNA3-202ENST00000348639 CD247P20963 164 aa19.27■□□□□ 0.67
CHRNA3-202ENST00000348639 GPC1P35052 558 aa19.27■□□□□ 0.67
CHRNA3-202ENST00000348639 NCBP2P52298 156 aaKnown RBP eCLIP19.27■□□□□ 0.67
CHRNA3-202ENST00000348639 RPS15AP62244 130 aaKnown RBP19.27■□□□□ 0.67
CHRNA3-202ENST00000348639 MAD2L1BPQ15013 274 aaPredicted RBP19.27■□□□□ 0.67
CHRNA3-202ENST00000348639 EXOC3L2Q2M3D2 409 aa19.27■□□□□ 0.67
CHRNA3-202ENST00000348639 ALG11Q2TAA5 492 aa19.27■□□□□ 0.67
CHRNA3-202ENST00000348639 TJAP1Q5JTD0 557 aa19.27■□□□□ 0.67
CHRNA3-202ENST00000348639 GTF2IRD2BQ6EKJ0 949 aa19.27■□□□□ 0.67
CHRNA3-202ENST00000348639 GTF2IRD2Q86UP8 949 aa19.27■□□□□ 0.67
CHRNA3-202ENST00000348639 OR52J3Q8NH60 311 aa19.27■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms