RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 PCDHGB6Q9Y5F9 930 aa20.28■□□□□ 0.84
PTPN18-202ENST00000347849 PRAMEF33A0A0G2JMD5 474 aa20.27■□□□□ 0.84
PTPN18-202ENST00000347849 GNG14A0A1W2PPG7 69 aa20.27■□□□□ 0.84
PTPN18-202ENST00000347849 NTSR1P30989 418 aa20.27■□□□□ 0.84
PTPN18-202ENST00000347849 CTHP32929 405 aa20.27■□□□□ 0.84
PTPN18-202ENST00000347849 MC1RQ01726 317 aa20.27■□□□□ 0.84
PTPN18-202ENST00000347849 HTR4Q13639 388 aa20.27■□□□□ 0.84
PTPN18-202ENST00000347849 THOC7Q6I9Y2 204 aaKnown RBP20.27■□□□□ 0.84
PTPN18-202ENST00000347849 FAM124AQ86V42 546 aa20.27■□□□□ 0.84
PTPN18-202ENST00000347849 DCUN1D3Q8IWE4 304 aa20.27■□□□□ 0.84
PTPN18-202ENST00000347849 OR5K2Q8NHB8 316 aa20.27■□□□□ 0.84
PTPN18-202ENST00000347849 C1QTNF2Q9BXJ5 285 aa20.27■□□□□ 0.84
PTPN18-202ENST00000347849 OSGEPL1Q9H4B0 414 aa20.27■□□□□ 0.84
PTPN18-202ENST00000347849 CUEDC1Q9NWM3 386 aaPredicted RBP20.27■□□□□ 0.84
PTPN18-202ENST00000347849 EHD3Q9NZN3 535 aa20.27■□□□□ 0.84
PTPN18-202ENST00000347849 TAC3Q9UHF0 121 aa20.27■□□□□ 0.84
PTPN18-202ENST00000347849 A3GALT2U3KPV4 340 aa20.27■□□□□ 0.84
PTPN18-202ENST00000347849 SCAMP2O15127 329 aaKnown RBP20.27■□□□□ 0.83
PTPN18-202ENST00000347849 KMOO15229 486 aa20.27■□□□□ 0.83
PTPN18-202ENST00000347849 PCDH7O60245 1069 aa20.27■□□□□ 0.83
PTPN18-202ENST00000347849 TIA1P31483 386 aaKnown RBP eCLIP20.27■□□□□ 0.83
PTPN18-202ENST00000347849 TCEA2Q15560 299 aa20.27■□□□□ 0.83
PTPN18-202ENST00000347849 ZNF385BQ569K4 471 aa20.27■□□□□ 0.83
PTPN18-202ENST00000347849 ARMCX4Q5H9R4 360 aa20.27■□□□□ 0.83
PTPN18-202ENST00000347849 COMMD6Q7Z4G1 85 aa20.27■□□□□ 0.83
PTPN18-202ENST00000347849 MAL2Q969L2 176 aa20.27■□□□□ 0.83
PTPN18-202ENST00000347849 EFCAB11Q9BUY7 163 aa20.27■□□□□ 0.83
PTPN18-202ENST00000347849 GABARAPL3Q9BY60 117 aa20.27■□□□□ 0.83
PTPN18-202ENST00000347849 PCDHGB3Q9Y5G1 929 aa20.27■□□□□ 0.83
PTPN18-202ENST00000347849 E9PQ18 207 aa20.26■□□□□ 0.83
PTPN18-202ENST00000347849 SSX4O60224 188 aa20.26■□□□□ 0.83
PTPN18-202ENST00000347849 TBX6O95947 436 aaPredicted RBP20.26■□□□□ 0.83
PTPN18-202ENST00000347849 KELP23276 732 aa20.26■□□□□ 0.83
PTPN18-202ENST00000347849 IGFALSP35858 605 aa20.26■□□□□ 0.83
PTPN18-202ENST00000347849 GGT2P36268 569 aa20.26■□□□□ 0.83
PTPN18-202ENST00000347849 KCNJ10P78508 379 aa20.26■□□□□ 0.83
PTPN18-202ENST00000347849 RPA4Q13156 261 aa20.26■□□□□ 0.83
PTPN18-202ENST00000347849 AGERQ15109 404 aa20.26■□□□□ 0.83
PTPN18-202ENST00000347849 MLF2Q15773 248 aaPredicted RBP20.26■□□□□ 0.83
PTPN18-202ENST00000347849 STX19Q8N4C7 294 aa20.26■□□□□ 0.83
PTPN18-202ENST00000347849 KBTBD8Q8NFY9 601 aa20.26■□□□□ 0.83
PTPN18-202ENST00000347849 OR8J2Q8NGG1 315 aa20.26■□□□□ 0.83
PTPN18-202ENST00000347849 EPYCQ99645 322 aa20.26■□□□□ 0.83
PTPN18-202ENST00000347849 SLC17A9Q9BYT1 436 aa20.26■□□□□ 0.83
PTPN18-202ENST00000347849 SLC31A1O15431 190 aa20.26■□□□□ 0.83
PTPN18-202ENST00000347849 KLF8O95600 359 aaPredicted RBP20.26■□□□□ 0.83
PTPN18-202ENST00000347849 PTHP01270 115 aa20.26■□□□□ 0.83
PTPN18-202ENST00000347849 IDSP22304 550 aa20.26■□□□□ 0.83
PTPN18-202ENST00000347849 ADPRHP54922 357 aa20.26■□□□□ 0.83
PTPN18-202ENST00000347849 PPP2CBP62714 309 aa20.26■□□□□ 0.83
PTPN18-202ENST00000347849 PPP2CAP67775 309 aa20.26■□□□□ 0.83
PTPN18-202ENST00000347849 SRSF11Q05519 484 aaKnown RBP20.26■□□□□ 0.83
PTPN18-202ENST00000347849 TMEM31Q5JXX7 168 aa20.26■□□□□ 0.83
PTPN18-202ENST00000347849 NANOGNBQ7Z5D8 188 aa20.26■□□□□ 0.83
PTPN18-202ENST00000347849 IL17RDQ8NFM7 739 aa20.26■□□□□ 0.83
PTPN18-202ENST00000347849 OR52J3Q8NH60 311 aa20.26■□□□□ 0.83
PTPN18-202ENST00000347849 RIPOR3Q96MK2 946 aa20.26■□□□□ 0.83
PTPN18-202ENST00000347849 INSM2Q96T92 566 aaPredicted RBP20.26■□□□□ 0.83
PTPN18-202ENST00000347849 DUSP26Q9BV47 211 aa20.26■□□□□ 0.83
PTPN18-202ENST00000347849 NUAK2Q9H093 628 aa20.26■□□□□ 0.83
PTPN18-202ENST00000347849 PLCXD1Q9NUJ7 323 aa20.26■□□□□ 0.83
PTPN18-202ENST00000347849 SUV39H1O43463 412 aa20.25■□□□□ 0.83
PTPN18-202ENST00000347849 PI15O43692 258 aa20.25■□□□□ 0.83
PTPN18-202ENST00000347849 RNGTTO60942 597 aaKnown RBP20.25■□□□□ 0.83
PTPN18-202ENST00000347849 CEACAM5P06731 702 aa20.25■□□□□ 0.83
PTPN18-202ENST00000347849 RGS6P49758 472 aa20.25■□□□□ 0.83
PTPN18-202ENST00000347849 CRYBA2P53672 197 aa20.25■□□□□ 0.83
PTPN18-202ENST00000347849 SGCGQ13326 291 aa20.25■□□□□ 0.83
PTPN18-202ENST00000347849 PRSS53Q2L4Q9 553 aa20.25■□□□□ 0.83
PTPN18-202ENST00000347849 FAM129CQ86XR2 697 aa20.25■□□□□ 0.83
PTPN18-202ENST00000347849 MMP21Q8N119 569 aa20.25■□□□□ 0.83
PTPN18-202ENST00000347849 LINC01555Q8NAE3 123 aa20.25■□□□□ 0.83
PTPN18-202ENST00000347849 GABRG3Q99928 467 aa20.25■□□□□ 0.83
PTPN18-202ENST00000347849 TPT1P8Q9HAU6 139 aa20.25■□□□□ 0.83
PTPN18-202ENST00000347849 C14orf119Q9NWQ9 140 aa20.25■□□□□ 0.83
PTPN18-202ENST00000347849 MOSPD1Q9UJG1 213 aa20.25■□□□□ 0.83
PTPN18-202ENST00000347849 FZD4Q9ULV1 537 aa20.25■□□□□ 0.83
PTPN18-202ENST00000347849 PEX16Q9Y5Y5 336 aa20.25■□□□□ 0.83
PTPN18-202ENST00000347849 PLRG1O43660 514 aaKnown RBP20.25■□□□□ 0.83
PTPN18-202ENST00000347849 KRT8P05787 483 aa20.25■□□□□ 0.83
PTPN18-202ENST00000347849 ADORA3P0DMS8 318 aa20.25■□□□□ 0.83
PTPN18-202ENST00000347849 HOXB2P14652 356 aa20.25■□□□□ 0.83
PTPN18-202ENST00000347849 RPS21P63220 83 aaKnown RBP20.25■□□□□ 0.83
PTPN18-202ENST00000347849 ST3GAL4Q11206 333 aa20.25■□□□□ 0.83
PTPN18-202ENST00000347849 SPIN4Q56A73 249 aa20.25■□□□□ 0.83
PTPN18-202ENST00000347849 ZNF605Q86T29 641 aa20.25■□□□□ 0.83
PTPN18-202ENST00000347849 SLC5A8Q8N695 610 aa20.25■□□□□ 0.83
PTPN18-202ENST00000347849 OR4K1Q8NGD4 311 aa20.25■□□□□ 0.83
PTPN18-202ENST00000347849 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.25■□□□□ 0.83
PTPN18-202ENST00000347849 SPPL2AQ8TCT8 520 aa20.25■□□□□ 0.83
PTPN18-202ENST00000347849 UTP15Q8TED0 518 aaKnown RBP20.25■□□□□ 0.83
PTPN18-202ENST00000347849 XKR8Q9H6D3 395 aa20.25■□□□□ 0.83
PTPN18-202ENST00000347849 RLIMQ9NVW2 624 aa20.25■□□□□ 0.83
PTPN18-202ENST00000347849 SH3BP4Q9P0V3 963 aa20.25■□□□□ 0.83
PTPN18-202ENST00000347849 CA5BQ9Y2D0 317 aa20.25■□□□□ 0.83
PTPN18-202ENST00000347849 PCDHGA3Q9Y5H0 932 aa20.25■□□□□ 0.83
PTPN18-202ENST00000347849 SNX8Q9Y5X2 465 aa20.25■□□□□ 0.83
PTPN18-202ENST00000347849 TBC1D3DA0A087WVF3 549 aa20.24■□□□□ 0.83
PTPN18-202ENST00000347849 TBC1D3IA0A087WXS9 549 aa20.24■□□□□ 0.83
PTPN18-202ENST00000347849 TBC1D3EA0A087X179 549 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms