RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 LRIT2A6NDA9 550 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 CHURC1-FNTBB4DL54 471 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 C4orf51C9J302 202 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 DLGAP1O14490 977 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 TERTO14746 1132 aaKnown RBP8.77□□□□□ -1.01
ATG4A-202ENST00000345734 PDPK1O15530 556 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 TMPRSS11DO60235 418 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 MTRF1O75570 445 aaKnown RBP8.77□□□□□ -1.01
ATG4A-202ENST00000345734 CLEC3AO75596 197 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 HNRNPCP07910 306 aaKnown RBP eCLIP8.77□□□□□ -1.01
ATG4A-202ENST00000345734 RETP07949 1114 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 F3P13726 295 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 S100A1P23297 94 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 CD6P30203 668 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 SERPINB1P30740 379 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 CCR5P51681 352 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 EIF2B5Q13144 721 aaKnown RBP8.77□□□□□ -1.01
ATG4A-202ENST00000345734 LSAMPQ13449 338 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 UBXN2BQ14CS0 331 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 CPZQ66K79 652 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 TBPL2Q6SJ96 375 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 UGT2A3Q6UWM9 527 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 IKBIPQ70UQ0 350 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 SPRED1Q7Z699 444 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 MARVELD2Q8N4S9 558 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 DEFB119Q8N690 84 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 FAM47BQ8NA70 645 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 OR52E4Q8NGH9 312 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 RGMAQ96B86 450 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 TEFMQ96QE5 360 aaKnown RBP8.77□□□□□ -1.01
ATG4A-202ENST00000345734 C17orf62Q9BQA9 187 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 UGT2B28Q9BY64 529 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 FOXQ1Q9C009 403 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 TMEM184CQ9NVA4 438 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 ATAD3AQ9NVI7 634 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 GPATCH2Q9NW75 528 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 TRNAU1APQ9NX07 287 aaKnown RBP8.77□□□□□ -1.01
ATG4A-202ENST00000345734 RABL2AQ9UBK7 228 aaPredicted RBP8.77□□□□□ -1.01
ATG4A-202ENST00000345734 ZNF282Q9UDV7 671 aaPredicted RBP8.77□□□□□ -1.01
ATG4A-202ENST00000345734 CARD8Q9Y2G2 431 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 HIF3AQ9Y2N7 669 aa8.77□□□□□ -1.01
ATG4A-202ENST00000345734 H0YJX3 145 aa8.76□□□□□ -1.01
ATG4A-202ENST00000345734 UPK1AO00322 258 aa8.76□□□□□ -1.01
ATG4A-202ENST00000345734 CLOCKO15516 846 aa8.76□□□□□ -1.01
ATG4A-202ENST00000345734 WISP1O95388 367 aa8.76□□□□□ -1.01
ATG4A-202ENST00000345734 TNFP01375 233 aa8.76□□□□□ -1.01
ATG4A-202ENST00000345734 NID1P14543 1247 aa8.76□□□□□ -1.01
ATG4A-202ENST00000345734 PORP16435 677 aaPredicted RBP8.76□□□□□ -1.01
ATG4A-202ENST00000345734 DDCP20711 480 aa8.76□□□□□ -1.01
ATG4A-202ENST00000345734 NDUFS1P28331 727 aa8.76□□□□□ -1.01
ATG4A-202ENST00000345734 SHMT2P34897 504 aa8.76□□□□□ -1.01
ATG4A-202ENST00000345734 RPL3P39023 403 aaKnown RBP8.76□□□□□ -1.01
ATG4A-202ENST00000345734 HSPA13P48723 471 aa8.76□□□□□ -1.01
ATG4A-202ENST00000345734 PXNP49023 591 aaPredicted RBP8.76□□□□□ -1.01
ATG4A-202ENST00000345734 ALDH9A1P49189 494 aa8.76□□□□□ -1.01
ATG4A-202ENST00000345734 ABATP80404 500 aa8.76□□□□□ -1.01
ATG4A-202ENST00000345734 ZIC1Q15915 447 aa8.76□□□□□ -1.01
ATG4A-202ENST00000345734 VMACQ2NL98 169 aa8.76□□□□□ -1.01
ATG4A-202ENST00000345734 INTS11Q5TA45 600 aaKnown RBP8.76□□□□□ -1.01
ATG4A-202ENST00000345734 OR4C11Q6IEV9 310 aa8.76□□□□□ -1.01
ATG4A-202ENST00000345734 ANGPTL8Q6UXH0 198 aa8.76□□□□□ -1.01
ATG4A-202ENST00000345734 ZNF793Q6ZN11 406 aa8.76□□□□□ -1.01
ATG4A-202ENST00000345734 PAGE2Q7Z2X7 111 aa8.76□□□□□ -1.01
ATG4A-202ENST00000345734 NUDT13Q86X67 352 aa8.76□□□□□ -1.01
ATG4A-202ENST00000345734 NAGSQ8N159 534 aa8.76□□□□□ -1.01
ATG4A-202ENST00000345734 SYNPOQ8N3V7 929 aa8.76□□□□□ -1.01
ATG4A-202ENST00000345734 OR5AK3PQ8NH89 298 aa8.76□□□□□ -1.01
ATG4A-202ENST00000345734 GOT1L1Q8NHS2 421 aaPredicted RBP8.76□□□□□ -1.01
ATG4A-202ENST00000345734 MAL2Q969L2 176 aa8.76□□□□□ -1.01
ATG4A-202ENST00000345734 CDX2Q99626 313 aaPredicted RBP8.76□□□□□ -1.01
ATG4A-202ENST00000345734 ORAI3Q9BRQ5 295 aa8.76□□□□□ -1.01
ATG4A-202ENST00000345734 SLC35A5Q9BS91 424 aa8.76□□□□□ -1.01
ATG4A-202ENST00000345734 C9orf16Q9BUW7 83 aa8.76□□□□□ -1.01
ATG4A-202ENST00000345734 CHST8Q9H2A9 424 aa8.76□□□□□ -1.01
ATG4A-202ENST00000345734 SRMSQ9H3Y6 488 aa8.76□□□□□ -1.01
ATG4A-202ENST00000345734 Q9H521 79 aa8.76□□□□□ -1.01
ATG4A-202ENST00000345734 SLAMF7Q9NQ25 335 aa8.76□□□□□ -1.01
ATG4A-202ENST00000345734 MIEF1Q9NQG6 463 aa8.76□□□□□ -1.01
ATG4A-202ENST00000345734 RHBDL2Q9NX52 303 aa8.76□□□□□ -1.01
ATG4A-202ENST00000345734 TEX10Q9NXF1 929 aaPredicted RBP8.76□□□□□ -1.01
ATG4A-202ENST00000345734 OR6C2Q9NZP2 312 aa8.76□□□□□ -1.01
ATG4A-202ENST00000345734 MAGED1Q9Y5V3 778 aaPredicted RBP8.76□□□□□ -1.01
ATG4A-202ENST00000345734 SNX11Q9Y5W9 270 aa8.76□□□□□ -1.01
ATG4A-202ENST00000345734 DGKBQ9Y6T7 804 aa8.76□□□□□ -1.01
ATG4A-202ENST00000345734 NINQ8N4C6 2090 aa8.76□□□□□ -1.01
ATG4A-202ENST00000345734 IGHV1OR15-9A0A0B4J2B8 117 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 RNF103-CHMP3A0A140T963 221 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 A0A1W2PRB8 838 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.75□□□□□ -1.01
ATG4A-202ENST00000345734 PLOD2O00469 737 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 EI24O14681 340 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 RASAL1O95294 804 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 ZNF682O95780 498 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 THEGLP0DJG4 465 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 ZNF23P17027 643 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 CMPK1P30085 196 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 GRK3P35626 688 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 MVDP53602 400 aa8.75□□□□□ -1.01
ATG4A-202ENST00000345734 ILF3Q12906 894 aaKnown RBP eCLIP8.75□□□□□ -1.01
ATG4A-202ENST00000345734 GPR18Q14330 331 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms