RNA–Protein interactions for RNA: ENST00000344935.8

CPSF4L-201, Transcript of cleavage and polyadenylation specific factor 4 like, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CPSF4L, Length 647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4L-201ENST00000344935 SPRED3Q2MJR0 410 aa7.54□□□□□ -1.2
CPSF4L-201ENST00000344935 DEFB113Q30KQ7 82 aa7.54□□□□□ -1.2
CPSF4L-201ENST00000344935 SLC22A10Q63ZE4 541 aa7.54□□□□□ -1.2
CPSF4L-201ENST00000344935 NSUN5P2Q63ZY6 315 aa7.54□□□□□ -1.2
CPSF4L-201ENST00000344935 TMEM81Q6P7N7 255 aa7.54□□□□□ -1.2
CPSF4L-201ENST00000344935 C16orf47Q6ZP98 133 aaPredicted RBP7.54□□□□□ -1.2
CPSF4L-201ENST00000344935 ZC3HC1Q86WB0 502 aaKnown RBP7.54□□□□□ -1.2
CPSF4L-201ENST00000344935 KRTAP1-3Q8IUG1 177 aa7.54□□□□□ -1.2
CPSF4L-201ENST00000344935 C9orf40Q8IXQ3 194 aa7.54□□□□□ -1.2
CPSF4L-201ENST00000344935 BBOF1Q8ND07 529 aa7.54□□□□□ -1.2
CPSF4L-201ENST00000344935 GOT1L1Q8NHS2 421 aaPredicted RBP7.54□□□□□ -1.2
CPSF4L-201ENST00000344935 SMPDL3BQ92485 455 aa7.54□□□□□ -1.2
CPSF4L-201ENST00000344935 MAGOHBQ96A72 148 aaKnown RBP7.54□□□□□ -1.2
CPSF4L-201ENST00000344935 ARSGQ96EG1 525 aa7.54□□□□□ -1.2
CPSF4L-201ENST00000344935 PTCD3Q96EY7 689 aaKnown RBP7.54□□□□□ -1.2
CPSF4L-201ENST00000344935 PBKQ96KB5 322 aa7.54□□□□□ -1.2
CPSF4L-201ENST00000344935 C18orf12Q96KH6 178 aa7.54□□□□□ -1.2
CPSF4L-201ENST00000344935 ZFP3Q96NJ6 502 aa7.54□□□□□ -1.2
CPSF4L-201ENST00000344935 PELOQ9BRX2 385 aaKnown RBP7.54□□□□□ -1.2
CPSF4L-201ENST00000344935 TBCDQ9BTW9 1192 aa7.54□□□□□ -1.2
CPSF4L-201ENST00000344935 ALOXE3Q9BYJ1 711 aa7.54□□□□□ -1.2
CPSF4L-201ENST00000344935 DERL2Q9GZP9 239 aa7.54□□□□□ -1.2
CPSF4L-201ENST00000344935 RBSNQ9H1K0 784 aa7.54□□□□□ -1.2
CPSF4L-201ENST00000344935 UBQLN3Q9H347 655 aa7.54□□□□□ -1.2
CPSF4L-201ENST00000344935 PLEKHF2Q9H8W4 249 aa7.54□□□□□ -1.2
CPSF4L-201ENST00000344935 COPS7BQ9H9Q2 264 aaPredicted RBP7.54□□□□□ -1.2
CPSF4L-201ENST00000344935 PRDM7Q9NQW5 492 aa7.54□□□□□ -1.2
CPSF4L-201ENST00000344935 BEX4Q9NWD9 120 aaPredicted RBP7.54□□□□□ -1.2
CPSF4L-201ENST00000344935 MS4A12Q9NXJ0 267 aa7.54□□□□□ -1.2
CPSF4L-201ENST00000344935 FETUBQ9UGM5 382 aa7.54□□□□□ -1.2
CPSF4L-201ENST00000344935 IKZF3Q9UKT9 509 aa7.54□□□□□ -1.2
CPSF4L-201ENST00000344935 ACAD8Q9UKU7 415 aa7.54□□□□□ -1.2
CPSF4L-201ENST00000344935 TSC22D4Q9Y3Q8 395 aa7.54□□□□□ -1.2
CPSF4L-201ENST00000344935 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.54□□□□□ -1.2
CPSF4L-201ENST00000344935 HIVEP2P31629 2446 aa7.54□□□□□ -1.2
CPSF4L-201ENST00000344935 NINQ8N4C6 2090 aa7.54□□□□□ -1.2
CPSF4L-201ENST00000344935 KIAA1549Q9HCM3 1950 aa7.53□□□□□ -1.2
CPSF4L-201ENST00000344935 ARID1AO14497 2285 aa7.53□□□□□ -1.2
CPSF4L-201ENST00000344935 GOLGA6L10A0A0M3HER8 536 aa7.53□□□□□ -1.2
CPSF4L-201ENST00000344935 MBD3L4A6NDZ8 208 aaPredicted RBP7.53□□□□□ -1.2
CPSF4L-201ENST00000344935 MBD3L3A6NE82 208 aaPredicted RBP7.53□□□□□ -1.2
CPSF4L-201ENST00000344935 ANKDD1BA6NHY2 528 aa7.53□□□□□ -1.2
CPSF4L-201ENST00000344935 MBD3L5A6NJ08 208 aaPredicted RBP7.53□□□□□ -1.2
CPSF4L-201ENST00000344935 OR6C76A6NM76 312 aa7.53□□□□□ -1.2
CPSF4L-201ENST00000344935 C17orf105B2RV13 164 aa7.53□□□□□ -1.2
CPSF4L-201ENST00000344935 CDC7O00311 574 aa7.53□□□□□ -1.2
CPSF4L-201ENST00000344935 DNALI1O14645 258 aaPredicted RBP7.53□□□□□ -1.2
CPSF4L-201ENST00000344935 DYRK3O43781 588 aa7.53□□□□□ -1.2
CPSF4L-201ENST00000344935 CDH16O75309 829 aa7.53□□□□□ -1.2
CPSF4L-201ENST00000344935 TRIM3O75382 744 aaPredicted RBP7.53□□□□□ -1.2
CPSF4L-201ENST00000344935 WDR47O94967 919 aa7.53□□□□□ -1.2
CPSF4L-201ENST00000344935 C1QAP02745 245 aa7.53□□□□□ -1.2
CPSF4L-201ENST00000344935 IFNA16P05015 189 aa7.53□□□□□ -1.2
CPSF4L-201ENST00000344935 HEXAP06865 529 aa7.53□□□□□ -1.2
CPSF4L-201ENST00000344935 EPXP11678 715 aa7.53□□□□□ -1.2
CPSF4L-201ENST00000344935 HIST1H1TP22492 207 aaPredicted RBP7.53□□□□□ -1.2
CPSF4L-201ENST00000344935 CXCR5P32302 372 aa7.53□□□□□ -1.2
CPSF4L-201ENST00000344935 DNASE1L1P49184 302 aa7.53□□□□□ -1.2
CPSF4L-201ENST00000344935 KCNJ2P63252 427 aa7.53□□□□□ -1.2
CPSF4L-201ENST00000344935 PLIN5Q00G26 463 aa7.53□□□□□ -1.2
CPSF4L-201ENST00000344935 STX4Q12846 297 aa7.53□□□□□ -1.2
CPSF4L-201ENST00000344935 MORF4L2Q15014 288 aa7.53□□□□□ -1.2
CPSF4L-201ENST00000344935 TGFBIQ15582 683 aa7.53□□□□□ -1.2
CPSF4L-201ENST00000344935 ZNF750Q32MQ0 723 aa7.53□□□□□ -1.2
CPSF4L-201ENST00000344935 PAGE2BQ5JRK9 111 aa7.53□□□□□ -1.2
CPSF4L-201ENST00000344935 SHEQ5VZ18 495 aa7.53□□□□□ -1.2
CPSF4L-201ENST00000344935 WDR53Q7Z5U6 358 aaPredicted RBP7.53□□□□□ -1.2
CPSF4L-201ENST00000344935 LRRC75A-AS1Q8N1F1 130 aa7.53□□□□□ -1.2
CPSF4L-201ENST00000344935 ZNF441Q8N8Z8 693 aa7.53□□□□□ -1.2
CPSF4L-201ENST00000344935 PDPRQ8NCN5 879 aa7.53□□□□□ -1.2
CPSF4L-201ENST00000344935 NAXEQ8NCW5 288 aa7.53□□□□□ -1.2
CPSF4L-201ENST00000344935 C17orf47Q8NEP4 570 aa7.53□□□□□ -1.2
CPSF4L-201ENST00000344935 MBD3L2Q8NHZ7 208 aaPredicted RBP7.53□□□□□ -1.2
CPSF4L-201ENST00000344935 ACTRT1Q8TDG2 376 aa7.53□□□□□ -1.2
CPSF4L-201ENST00000344935 ANKRD9Q96BM1 317 aaPredicted RBP7.53□□□□□ -1.2
CPSF4L-201ENST00000344935 ZNF597Q96LX8 424 aa7.53□□□□□ -1.2
CPSF4L-201ENST00000344935 PIP5K1AQ99755 562 aa7.53□□□□□ -1.2
CPSF4L-201ENST00000344935 MS4A8Q9BY19 250 aa7.53□□□□□ -1.2
CPSF4L-201ENST00000344935 OR8D2Q9GZM6 311 aa7.53□□□□□ -1.2
CPSF4L-201ENST00000344935 LIME1Q9H400 295 aa7.53□□□□□ -1.2
CPSF4L-201ENST00000344935 PROK2Q9HC23 129 aa7.53□□□□□ -1.2
CPSF4L-201ENST00000344935 NSMCE4AQ9NXX6 385 aa7.53□□□□□ -1.2
CPSF4L-201ENST00000344935 CNOT11Q9UKZ1 510 aaKnown RBP7.53□□□□□ -1.2
CPSF4L-201ENST00000344935 PLEKHA6Q9Y2H5 1048 aa7.53□□□□□ -1.2
CPSF4L-201ENST00000344935 JRKLQ9Y4A0 524 aa7.53□□□□□ -1.2
CPSF4L-201ENST00000344935 TEX264Q9Y6I9 313 aa7.53□□□□□ -1.2
CPSF4L-201ENST00000344935 SPACA6W5XKT8 324 aa7.53□□□□□ -1.2
CPSF4L-201ENST00000344935 FBN1P35555 2871 aaKnown RBP7.52□□□□□ -1.21
CPSF4L-201ENST00000344935 ATP6AP2A0A1C7CYW4 349 aa7.52□□□□□ -1.21
CPSF4L-201ENST00000344935 NPEPPSL1A6NEC2 478 aa7.52□□□□□ -1.21
CPSF4L-201ENST00000344935 G3V3Y1 287 aa7.52□□□□□ -1.21
CPSF4L-201ENST00000344935 PRAMEF4O60810 478 aa7.52□□□□□ -1.21
CPSF4L-201ENST00000344935 ATP6AP2O75787 350 aa7.52□□□□□ -1.21
CPSF4L-201ENST00000344935 ETHE1O95571 254 aa7.52□□□□□ -1.21
CPSF4L-201ENST00000344935 HPNP05981 417 aa7.52□□□□□ -1.21
CPSF4L-201ENST00000344935 CD22P20273 847 aa7.52□□□□□ -1.21
CPSF4L-201ENST00000344935 SAT1P21673 171 aa7.52□□□□□ -1.21
CPSF4L-201ENST00000344935 TACR1P25103 407 aa7.52□□□□□ -1.21
CPSF4L-201ENST00000344935 ATP5A1P25705 553 aaKnown RBP7.52□□□□□ -1.21
CPSF4L-201ENST00000344935 IVDP26440 423 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms