RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 TAS2R1Q9NYW7 299 aa15.66■□□□□ 0.1
SMARCA4-201ENST00000344626 RBM7Q9Y580 266 aaKnown RBP15.66■□□□□ 0.1
SMARCA4-201ENST00000344626 CREG1O75629 220 aa15.66■□□□□ 0.1
SMARCA4-201ENST00000344626 CSTAP01040 98 aa15.66■□□□□ 0.1
SMARCA4-201ENST00000344626 ATXN1LP0C7T5 689 aaKnown RBP15.66■□□□□ 0.1
SMARCA4-201ENST00000344626 NPTX1Q15818 432 aa15.66■□□□□ 0.1
SMARCA4-201ENST00000344626 MINDY1Q8N5J2 469 aa15.66■□□□□ 0.1
SMARCA4-201ENST00000344626 OR6N1Q8NGY5 312 aa15.66■□□□□ 0.1
SMARCA4-201ENST00000344626 CTRCQ99895 268 aa15.66■□□□□ 0.1
SMARCA4-201ENST00000344626 DCUN1D5Q9BTE7 237 aa15.66■□□□□ 0.1
SMARCA4-201ENST00000344626 NLGN3Q9NZ94 848 aa15.66■□□□□ 0.1
SMARCA4-201ENST00000344626 BLACEA4D250 179 aa15.65■□□□□ 0.1
SMARCA4-201ENST00000344626 PRKD3O94806 890 aa15.65■□□□□ 0.1
SMARCA4-201ENST00000344626 ADRA1AP35348 466 aa15.65■□□□□ 0.1
SMARCA4-201ENST00000344626 RPS3AP61247 264 aaKnown RBP15.65■□□□□ 0.1
SMARCA4-201ENST00000344626 KANK2Q63ZY3 851 aa15.65■□□□□ 0.1
SMARCA4-201ENST00000344626 ATG9BQ674R7 924 aa15.65■□□□□ 0.1
SMARCA4-201ENST00000344626 SYT13Q7L8C5 426 aa15.65■□□□□ 0.1
SMARCA4-201ENST00000344626 OR8J3Q8NGG0 315 aa15.65■□□□□ 0.1
SMARCA4-201ENST00000344626 OR6K6Q8NGW6 343 aa15.65■□□□□ 0.1
SMARCA4-201ENST00000344626 ZNF707Q96C28 371 aaPredicted RBP15.65■□□□□ 0.1
SMARCA4-201ENST00000344626 TRNT1Q96Q11 434 aaKnown RBP15.65■□□□□ 0.1
SMARCA4-201ENST00000344626 HOXD1Q9GZZ0 328 aa15.65■□□□□ 0.1
SMARCA4-201ENST00000344626 POFUT2Q9Y2G5 429 aa15.65■□□□□ 0.1
SMARCA4-201ENST00000344626 POM121BA6NF01 834 aa15.65■□□□□ 0.1
SMARCA4-201ENST00000344626 C4orf47A7E2U8 309 aa15.65■□□□□ 0.1
SMARCA4-201ENST00000344626 CD2P06729 351 aa15.65■□□□□ 0.1
SMARCA4-201ENST00000344626 ZDHHC11BP0C7U3 371 aa15.65■□□□□ 0.1
SMARCA4-201ENST00000344626 ACADVLP49748 655 aa15.65■□□□□ 0.1
SMARCA4-201ENST00000344626 ASTLQ6HA08 431 aaPredicted RBP15.65■□□□□ 0.1
SMARCA4-201ENST00000344626 OR2T5Q6IEZ7 315 aa15.65■□□□□ 0.1
SMARCA4-201ENST00000344626 OR2T29Q8NH02 315 aa15.65■□□□□ 0.1
SMARCA4-201ENST00000344626 GAL3ST3Q96A11 431 aa15.65■□□□□ 0.1
SMARCA4-201ENST00000344626 PLA2G2FQ9BZM2 168 aa15.65■□□□□ 0.1
SMARCA4-201ENST00000344626 PRDM6Q9NQX0 595 aa15.65■□□□□ 0.1
SMARCA4-201ENST00000344626 CD47Q08722 323 aa15.65■□□□□ 0.1
SMARCA4-201ENST00000344626 LIN52Q52LA3 116 aa15.65■□□□□ 0.1
SMARCA4-201ENST00000344626 ASB15Q8WXK1 588 aa15.65■□□□□ 0.1
SMARCA4-201ENST00000344626 CD180Q99467 661 aa15.65■□□□□ 0.1
SMARCA4-201ENST00000344626 ACTR3BQ9P1U1 418 aa15.65■□□□□ 0.1
SMARCA4-201ENST00000344626 PRAMEF2O60811 474 aa15.65■□□□□ 0.1
SMARCA4-201ENST00000344626 CPNE6O95741 557 aa15.65■□□□□ 0.1
SMARCA4-201ENST00000344626 PGCP20142 388 aa15.65■□□□□ 0.1
SMARCA4-201ENST00000344626 PDHA2P29803 388 aa15.65■□□□□ 0.1
SMARCA4-201ENST00000344626 MMP12P39900 470 aa15.65■□□□□ 0.1
SMARCA4-201ENST00000344626 RASGEF1BQ0VAM2 473 aa15.65■□□□□ 0.1
SMARCA4-201ENST00000344626 RPE65Q16518 533 aa15.65■□□□□ 0.1
SMARCA4-201ENST00000344626 TMEM214Q6NUQ4 689 aaKnown RBP15.65■□□□□ 0.1
SMARCA4-201ENST00000344626 MSANTD1Q6ZTZ1 278 aa15.65■□□□□ 0.1
SMARCA4-201ENST00000344626 DNAJC5GQ8N7S2 189 aa15.65■□□□□ 0.1
SMARCA4-201ENST00000344626 OR9I1Q8NGQ6 314 aa15.65■□□□□ 0.1
SMARCA4-201ENST00000344626 RPL36Q9Y3U8 105 aaKnown RBP15.65■□□□□ 0.1
SMARCA4-201ENST00000344626 A0A1W2PRG6 482 aa15.64■□□□□ 0.09
SMARCA4-201ENST00000344626 SCRG1O75711 98 aa15.64■□□□□ 0.09
SMARCA4-201ENST00000344626 TACSTD2P09758 323 aa15.64■□□□□ 0.09
SMARCA4-201ENST00000344626 AOAHP28039 575 aa15.64■□□□□ 0.09
SMARCA4-201ENST00000344626 CLDN8P56748 225 aa15.64■□□□□ 0.09
SMARCA4-201ENST00000344626 TRAM2Q15035 370 aa15.64■□□□□ 0.09
SMARCA4-201ENST00000344626 TAZQ16635 292 aa15.64■□□□□ 0.09
SMARCA4-201ENST00000344626 PROKR2Q8NFJ6 384 aa15.64■□□□□ 0.09
SMARCA4-201ENST00000344626 ENKURQ8TC29 256 aa15.64■□□□□ 0.09
SMARCA4-201ENST00000344626 ELF4Q99607 663 aaPredicted RBP15.64■□□□□ 0.09
SMARCA4-201ENST00000344626 AIG1Q9NVV5 245 aa15.64■□□□□ 0.09
SMARCA4-201ENST00000344626 SCAMP2O15127 329 aaKnown RBP15.64■□□□□ 0.09
SMARCA4-201ENST00000344626 OR12D1P0DN82 309 aa15.64■□□□□ 0.09
SMARCA4-201ENST00000344626 DIO3P55073 304 aa15.64■□□□□ 0.09
SMARCA4-201ENST00000344626 KCNC4Q03721 635 aa15.64■□□□□ 0.09
SMARCA4-201ENST00000344626 NKAIN2Q5VXU1 208 aa15.64■□□□□ 0.09
SMARCA4-201ENST00000344626 OR10H4Q8NGA5 316 aa15.64■□□□□ 0.09
SMARCA4-201ENST00000344626 RAB8BQ92930 207 aa15.64■□□□□ 0.09
SMARCA4-201ENST00000344626 C1orf21Q9H246 121 aa15.64■□□□□ 0.09
SMARCA4-201ENST00000344626 PLGRKTQ9HBL7 147 aa15.64■□□□□ 0.09
SMARCA4-201ENST00000344626 FGF21Q9NSA1 209 aa15.64■□□□□ 0.09
SMARCA4-201ENST00000344626 CMTM6Q9NX76 183 aa15.64■□□□□ 0.09
SMARCA4-201ENST00000344626 SDHDO14521 159 aa15.64■□□□□ 0.09
SMARCA4-201ENST00000344626 TAS2R38P59533 333 aa15.64■□□□□ 0.09
SMARCA4-201ENST00000344626 TYSND1Q2T9J0 566 aa15.64■□□□□ 0.09
SMARCA4-201ENST00000344626 TMEM107Q6UX40 140 aa15.64■□□□□ 0.09
SMARCA4-201ENST00000344626 KRT77Q7Z794 578 aa15.64■□□□□ 0.09
SMARCA4-201ENST00000344626 GALNT10Q86SR1 603 aa15.64■□□□□ 0.09
SMARCA4-201ENST00000344626 RBP7Q96R05 134 aa15.64■□□□□ 0.09
SMARCA4-201ENST00000344626 MCHR1Q99705 422 aa15.64■□□□□ 0.09
SMARCA4-201ENST00000344626 TTYH1Q9H313 450 aaPredicted RBP15.64■□□□□ 0.09
SMARCA4-201ENST00000344626 HMG20AQ9NP66 347 aa15.64■□□□□ 0.09
SMARCA4-201ENST00000344626 NENFQ9UMX5 172 aa15.64■□□□□ 0.09
SMARCA4-201ENST00000344626 A8MVJ9 347 aa15.64■□□□□ 0.09
SMARCA4-201ENST00000344626 RPL5P46777 297 aaKnown RBP15.64■□□□□ 0.09
SMARCA4-201ENST00000344626 ATP12AP54707 1039 aa15.64■□□□□ 0.09
SMARCA4-201ENST00000344626 RIPK1Q13546 671 aa15.64■□□□□ 0.09
SMARCA4-201ENST00000344626 CYBRD1Q53TN4 286 aa15.64■□□□□ 0.09
SMARCA4-201ENST00000344626 OR52B6Q8NGF0 335 aa15.64■□□□□ 0.09
SMARCA4-201ENST00000344626 C16orf78Q8WTQ4 265 aa15.64■□□□□ 0.09
SMARCA4-201ENST00000344626 HPF1Q9NWY4 346 aa15.64■□□□□ 0.09
SMARCA4-201ENST00000344626 GIMAP2Q9UG22 337 aa15.64■□□□□ 0.09
SMARCA4-201ENST00000344626 TNS1Q9HBL0 1735 aaKnown RBP15.64■□□□□ 0.09
SMARCA4-201ENST00000344626 FAM186AA6NE01 2351 aa15.64■□□□□ 0.09
SMARCA4-201ENST00000344626 CASKO14936 926 aa15.63■□□□□ 0.09
SMARCA4-201ENST00000344626 GNALP38405 381 aa15.63■□□□□ 0.09
SMARCA4-201ENST00000344626 SMSP52788 366 aa15.63■□□□□ 0.09
SMARCA4-201ENST00000344626 PUM1Q14671 1186 aaKnown RBP eCLIP15.63■□□□□ 0.091e-7■□□□□ 10.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms