RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 RHCEP18577 417 aa14.14□□□□□ -0.15
VIPAS39-202ENST00000343765 FCARP24071 287 aa14.14□□□□□ -0.15
VIPAS39-202ENST00000343765 SSR2P43308 183 aa14.14□□□□□ -0.15
VIPAS39-202ENST00000343765 RUNX3Q13761 415 aa14.14□□□□□ -0.15
VIPAS39-202ENST00000343765 KRT33BQ14525 404 aa14.14□□□□□ -0.15
VIPAS39-202ENST00000343765 ARHGAP19Q14CB8 494 aa14.14□□□□□ -0.15
VIPAS39-202ENST00000343765 MLF2Q15773 248 aaPredicted RBP14.14□□□□□ -0.15
VIPAS39-202ENST00000343765 UBE2UQ5VVX9 321 aa14.14□□□□□ -0.15
VIPAS39-202ENST00000343765 KLHL17Q6TDP4 642 aa14.14□□□□□ -0.15
VIPAS39-202ENST00000343765 GPR32P1Q8NGA4 272 aa14.14□□□□□ -0.15
VIPAS39-202ENST00000343765 PHOSPHO2Q8TCD6 241 aa14.14□□□□□ -0.15
VIPAS39-202ENST00000343765 JPH3Q8WXH2 748 aaPredicted RBP14.14□□□□□ -0.15
VIPAS39-202ENST00000343765 PDXPQ96GD0 296 aa14.14□□□□□ -0.15
VIPAS39-202ENST00000343765 WFDC6Q9BQY6 131 aa14.14□□□□□ -0.15
VIPAS39-202ENST00000343765 AKIP1Q9NQ31 210 aa14.14□□□□□ -0.15
VIPAS39-202ENST00000343765 C11orf16Q9NQ32 467 aa14.14□□□□□ -0.15
VIPAS39-202ENST00000343765 SIRT3Q9NTG7 399 aaPredicted RBP14.14□□□□□ -0.15
VIPAS39-202ENST00000343765 LOC100506127A0A0U1RQW1 187 aa14.14□□□□□ -0.15
VIPAS39-202ENST00000343765 ANHXE9PGG2 379 aa14.14□□□□□ -0.15
VIPAS39-202ENST00000343765 M0R082 166 aa14.14□□□□□ -0.15
VIPAS39-202ENST00000343765 SLC28A2O43868 658 aa14.14□□□□□ -0.15
VIPAS39-202ENST00000343765 AIREO43918 545 aa14.14□□□□□ -0.15
VIPAS39-202ENST00000343765 SULT1C4O75897 302 aa14.14□□□□□ -0.15
VIPAS39-202ENST00000343765 GADD45AP24522 165 aa14.14□□□□□ -0.15
VIPAS39-202ENST00000343765 GPC1P35052 558 aa14.14□□□□□ -0.15
VIPAS39-202ENST00000343765 FEN1P39748 380 aaKnown RBP14.14□□□□□ -0.15
VIPAS39-202ENST00000343765 CRISP3P54108 245 aa14.14□□□□□ -0.15
VIPAS39-202ENST00000343765 PRKAG1P54619 331 aa14.14□□□□□ -0.15
VIPAS39-202ENST00000343765 ST3GAL4Q11206 333 aa14.14□□□□□ -0.15
VIPAS39-202ENST00000343765 FGL2Q14314 439 aa14.14□□□□□ -0.15
VIPAS39-202ENST00000343765 INAQ16352 499 aa14.14□□□□□ -0.15
VIPAS39-202ENST00000343765 UBE3DQ7Z6J8 389 aa14.14□□□□□ -0.15
VIPAS39-202ENST00000343765 SLC38A4Q969I6 547 aa14.14□□□□□ -0.15
VIPAS39-202ENST00000343765 RGMAQ96B86 450 aa14.14□□□□□ -0.15
VIPAS39-202ENST00000343765 TEFMQ96QE5 360 aaKnown RBP14.14□□□□□ -0.15
VIPAS39-202ENST00000343765 KXD1Q9BQD3 176 aa14.14□□□□□ -0.15
VIPAS39-202ENST00000343765 TMEM106CQ9BVX2 250 aa14.14□□□□□ -0.15
VIPAS39-202ENST00000343765 PLA2G2FQ9BZM2 168 aa14.14□□□□□ -0.15
VIPAS39-202ENST00000343765 PALMDQ9NP74 551 aa14.14□□□□□ -0.15
VIPAS39-202ENST00000343765 TRPC4Q9UBN4 977 aa14.14□□□□□ -0.15
VIPAS39-202ENST00000343765 TSC22D4Q9Y3Q8 395 aa14.14□□□□□ -0.15
VIPAS39-202ENST00000343765 PTHP01270 115 aa14.13□□□□□ -0.15
VIPAS39-202ENST00000343765 IGFBP1P08833 259 aaPredicted RBP14.13□□□□□ -0.15
VIPAS39-202ENST00000343765 BMP4P12644 408 aa14.13□□□□□ -0.15
VIPAS39-202ENST00000343765 CBLP22681 906 aa14.13□□□□□ -0.15
VIPAS39-202ENST00000343765 SOX9P48436 509 aa14.13□□□□□ -0.15
VIPAS39-202ENST00000343765 SERPINB10P48595 397 aa14.13□□□□□ -0.15
VIPAS39-202ENST00000343765 CSNK2BP67870 215 aa14.13□□□□□ -0.15
VIPAS39-202ENST00000343765 CSNK1G2P78368 415 aa14.13□□□□□ -0.15
VIPAS39-202ENST00000343765 SOWAHCQ53LP3 525 aaPredicted RBP14.13□□□□□ -0.15
VIPAS39-202ENST00000343765 DEPDC4Q8N2C3 294 aa14.13□□□□□ -0.15
VIPAS39-202ENST00000343765 ZNF675Q8TD23 568 aa14.13□□□□□ -0.15
VIPAS39-202ENST00000343765 XAGE5Q8WWM1 108 aa14.13□□□□□ -0.15
VIPAS39-202ENST00000343765 COL21A1Q96P44 957 aa14.13□□□□□ -0.15
VIPAS39-202ENST00000343765 BCL7BQ9BQE9 202 aa14.13□□□□□ -0.15
VIPAS39-202ENST00000343765 YIPF4Q9BSR8 244 aa14.13□□□□□ -0.15
VIPAS39-202ENST00000343765 FZD3Q9NPG1 666 aa14.13□□□□□ -0.15
VIPAS39-202ENST00000343765 DAPK2Q9UIK4 370 aa14.13□□□□□ -0.15
VIPAS39-202ENST00000343765 LAMA1P25391 3075 aa14.13□□□□□ -0.15
VIPAS39-202ENST00000343765 IGKV1-8A0A0C4DH67 115 aa14.13□□□□□ -0.15
VIPAS39-202ENST00000343765 HMGN4O00479 90 aa14.13□□□□□ -0.15
VIPAS39-202ENST00000343765 OR12D1P0DN82 309 aa14.13□□□□□ -0.15
VIPAS39-202ENST00000343765 CHMP24386 653 aa14.13□□□□□ -0.15
VIPAS39-202ENST00000343765 MAT2AP31153 395 aaKnown RBP14.13□□□□□ -0.15
VIPAS39-202ENST00000343765 CNR2P34972 360 aa14.13□□□□□ -0.15
VIPAS39-202ENST00000343765 LIMS1P48059 325 aa14.13□□□□□ -0.15
VIPAS39-202ENST00000343765 CCT3P49368 545 aaKnown RBP14.13□□□□□ -0.15
VIPAS39-202ENST00000343765 KCNC4Q03721 635 aa14.13□□□□□ -0.15
VIPAS39-202ENST00000343765 SYPL1Q16563 259 aa14.13□□□□□ -0.15
VIPAS39-202ENST00000343765 B3GNT7Q8NFL0 401 aa14.13□□□□□ -0.15
VIPAS39-202ENST00000343765 CHPT1Q8WUD6 406 aa14.13□□□□□ -0.15
VIPAS39-202ENST00000343765 IL4I1Q96RQ9 567 aa14.13□□□□□ -0.15
VIPAS39-202ENST00000343765 DPH7Q9BTV6 452 aa14.13□□□□□ -0.15
VIPAS39-202ENST00000343765 WDR12Q9GZL7 423 aaKnown RBP14.13□□□□□ -0.15
VIPAS39-202ENST00000343765 DCSTAMPQ9H295 470 aa14.13□□□□□ -0.15
VIPAS39-202ENST00000343765 SERHL2Q9H4I8 314 aa14.13□□□□□ -0.15
VIPAS39-202ENST00000343765 KLHL31Q9H511 634 aa14.13□□□□□ -0.15
VIPAS39-202ENST00000343765 RNF167Q9H6Y7 350 aa14.13□□□□□ -0.15
VIPAS39-202ENST00000343765 NEUROD4Q9HD90 331 aa14.13□□□□□ -0.15
VIPAS39-202ENST00000343765 TBCCD1Q9NVR7 557 aa14.13□□□□□ -0.15
VIPAS39-202ENST00000343765 GON4LQ3T8J9 2241 aa14.13□□□□□ -0.15
VIPAS39-202ENST00000343765 C2orf16Q68DN1 1984 aa14.13□□□□□ -0.15
VIPAS39-202ENST00000343765 PDZK1P1A8MUH7 402 aa14.12□□□□□ -0.15
VIPAS39-202ENST00000343765 TPST2O60704 377 aa14.12□□□□□ -0.15
VIPAS39-202ENST00000343765 MRPS14O60783 128 aaKnown RBP14.12□□□□□ -0.15
VIPAS39-202ENST00000343765 CBFA2T3O75081 653 aa14.12□□□□□ -0.15
VIPAS39-202ENST00000343765 SEMA7AO75326 666 aa14.12□□□□□ -0.15
VIPAS39-202ENST00000343765 GABRB1P18505 474 aa14.12□□□□□ -0.15
VIPAS39-202ENST00000343765 CDC42P60953 191 aa14.12□□□□□ -0.15
VIPAS39-202ENST00000343765 SEC23BQ15437 767 aa14.12□□□□□ -0.15
VIPAS39-202ENST00000343765 TBCEQ15813 527 aaPredicted RBP14.12□□□□□ -0.15
VIPAS39-202ENST00000343765 TRIM16LQ309B1 348 aa14.12□□□□□ -0.15
VIPAS39-202ENST00000343765 YAF2Q8IY57 180 aa14.12□□□□□ -0.15
VIPAS39-202ENST00000343765 CACTIN-AS1Q8N1I8 211 aa14.12□□□□□ -0.15
VIPAS39-202ENST00000343765 ZBED6CLQ96FA7 236 aaPredicted RBP14.12□□□□□ -0.15
VIPAS39-202ENST00000343765 QRFPRQ96P65 431 aa14.12□□□□□ -0.15
VIPAS39-202ENST00000343765 SLC6A17Q9H1V8 727 aa14.12□□□□□ -0.15
VIPAS39-202ENST00000343765 KCNK12Q9HB15 430 aa14.12□□□□□ -0.15
VIPAS39-202ENST00000343765 A4GALTQ9NPC4 353 aa14.12□□□□□ -0.15
VIPAS39-202ENST00000343765 IRAK4Q9NWZ3 460 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms