RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 CBLL1Q75N03 491 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 BMP8AQ7Z5Y6 402 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 IGFN1Q86VF2 1251 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 RELTQ969Z4 430 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 ISG20Q96AZ6 181 aaKnown RBP6.87□□□□□ -1.31
VCAN-202ENST00000342785 HCFC1R1Q9NWW0 138 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 COMMD9Q9P000 198 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 ENPP5Q9UJA9 477 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 FBXL21Q9UKT6 434 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 LIPT1Q9Y234 373 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 DOCK2Q92608 1830 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 A0A1W2PP55 124 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 IGLON5A6NGN9 336 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 PDHA2P29803 388 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 PIN1Q13526 163 aaPredicted RBP6.87□□□□□ -1.31
VCAN-202ENST00000342785 PON3Q15166 354 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 OR8K5Q8NH50 307 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 ECHDC3Q96DC8 303 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 METTL2AQ96IZ6 378 aaKnown RBP6.87□□□□□ -1.31
VCAN-202ENST00000342785 WACQ9BTA9 647 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 FEZF1A0PJY2 475 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 ARL6IP5O75915 188 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 SMIM18P0DKX4 95 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 NRIP1P48552 1158 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 RAB28P51157 221 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 ABATP80404 500 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 VLDLRP98155 873 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 CD83Q01151 205 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 RELAQ04206 551 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 SLC3A1Q07837 685 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 KEAP1Q14145 624 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 AAK1Q2M2I8 961 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 UGT3A2Q3SY77 523 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 XKR7Q5GH72 579 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 OR10H5Q8NGA6 315 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 OR4K14Q8NGD5 310 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 ZNF354BQ96LW1 612 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 FRMD6Q96NE9 622 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 BCL7BQ9BQE9 202 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 NDC1Q9BTX1 674 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 CPEB1Q9BZB8 566 aaKnown RBP6.87□□□□□ -1.31
VCAN-202ENST00000342785 OR6C70A6NIJ9 312 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 M0R129 80 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 GMFGO60234 142 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 FHP07954 510 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 GBX2P52951 348 aaPredicted RBP6.87□□□□□ -1.31
VCAN-202ENST00000342785 CXCR4P61073 352 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 SLAMF1Q13291 335 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 OR5AR1Q8NGP9 310 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 OR51A7Q8NH64 312 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 C1orf216Q8TAB5 229 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 ZFP90Q8TF47 636 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 SH3YL1Q96HL8 342 aaPredicted RBP6.87□□□□□ -1.31
VCAN-202ENST00000342785 ZIC5Q96T25 663 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 ZNF334Q9HCZ1 680 aaPredicted RBP6.87□□□□□ -1.31
VCAN-202ENST00000342785 MAFFQ9ULX9 164 aa6.87□□□□□ -1.31
VCAN-202ENST00000342785 SLC35F4A4IF30 521 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 J3QLW9 94 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 NOS1APO75052 506 aaPredicted RBP6.86□□□□□ -1.31
VCAN-202ENST00000342785 DRD2P14416 443 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 HOXB2P14652 356 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 PORP16435 677 aaPredicted RBP6.86□□□□□ -1.31
VCAN-202ENST00000342785 ZNF19P17023 458 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 PHC1P78364 1004 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 FRMPD2BQ6IN97 320 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 SYCE2Q6PIF2 218 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 EGFL6Q8IUX8 553 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 GAL3ST1Q99999 423 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 NMNAT1Q9HAN9 279 aaPredicted RBP6.86□□□□□ -1.31
VCAN-202ENST00000342785 TCF7L1Q9HCS4 588 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 NDRG2Q9UN36 371 aaKnown RBP6.86□□□□□ -1.31
VCAN-202ENST00000342785 EXOSC1Q9Y3B2 195 aaKnown RBP6.86□□□□□ -1.31
VCAN-202ENST00000342785 PROM1O43490 865 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 PFKLP17858 780 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 HRH2P25021 359 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 ACVR2AP27037 513 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 GCGRP47871 477 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 COL9A2Q14055 689 aaPredicted RBP6.86□□□□□ -1.31
VCAN-202ENST00000342785 PTGES3Q15185 160 aaKnown RBP6.86□□□□□ -1.31
VCAN-202ENST00000342785 SLC5A12Q1EHB4 618 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 RSPO2Q6UXX9 243 aaPredicted RBP6.86□□□□□ -1.31
VCAN-202ENST00000342785 OR52E4Q8NGH9 312 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 GRPEL2Q8TAA5 225 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 HMGB4Q8WW32 186 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 NR4A3Q92570 626 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 OSTF1Q92882 214 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 RPL3LQ92901 407 aaKnown RBP6.86□□□□□ -1.31
VCAN-202ENST00000342785 PCDHGB7Q9Y5F8 929 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 PCDHGB1Q9Y5G3 927 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 PCDHGA2Q9Y5H1 932 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 A0A1W2PQU0 124 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 C1orf226A1L170 272 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 EMC8O43402 210 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 RAB36O95755 333 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 ADRB3P13945 408 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 POLR2CP19387 275 aaPredicted RBP6.86□□□□□ -1.31
VCAN-202ENST00000342785 SLC7A9P82251 487 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 MGAT3Q09327 533 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 MICAQ29983 383 aa6.86□□□□□ -1.31
VCAN-202ENST00000342785 FAM26DQ5JW98 314 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms