RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 PTX3P26022 381 aaPredicted RBP15.81■□□□□ 0.12
BRCC3-202ENST00000340647 PTGER1P34995 402 aa15.81■□□□□ 0.12
BRCC3-202ENST00000340647 SOX3P41225 446 aa15.81■□□□□ 0.12
BRCC3-202ENST00000340647 STT3AP46977 705 aa15.81■□□□□ 0.12
BRCC3-202ENST00000340647 SERPINB9P50453 376 aa15.81■□□□□ 0.12
BRCC3-202ENST00000340647 ARFIP1P53367 373 aa15.81■□□□□ 0.12
BRCC3-202ENST00000340647 GPR85P60893 370 aa15.81■□□□□ 0.12
BRCC3-202ENST00000340647 RNF4P78317 190 aa15.81■□□□□ 0.12
BRCC3-202ENST00000340647 TNFRSF17Q02223 184 aa15.81■□□□□ 0.12
BRCC3-202ENST00000340647 FOLH1Q04609 750 aa15.81■□□□□ 0.12
BRCC3-202ENST00000340647 STX4Q12846 297 aa15.81■□□□□ 0.12
BRCC3-202ENST00000340647 CUL3Q13618 768 aa15.81■□□□□ 0.12
BRCC3-202ENST00000340647 KRTCAP3Q53RY4 240 aa15.81■□□□□ 0.12
BRCC3-202ENST00000340647 KLC3Q6P597 504 aa15.81■□□□□ 0.12
BRCC3-202ENST00000340647 LYPD8Q6UX82 237 aa15.81■□□□□ 0.12
BRCC3-202ENST00000340647 GPR180Q86V85 440 aa15.81■□□□□ 0.12
BRCC3-202ENST00000340647 MYLK4Q86YV6 388 aaPredicted RBP15.81■□□□□ 0.12
BRCC3-202ENST00000340647 SPPL2CQ8IUH8 684 aa15.81■□□□□ 0.12
BRCC3-202ENST00000340647 CYP4Z2PQ8N1L4 340 aa15.81■□□□□ 0.12
BRCC3-202ENST00000340647 ZFP62Q8NB50 900 aaPredicted RBP15.81■□□□□ 0.12
BRCC3-202ENST00000340647 MNS1Q8NEH6 495 aa15.81■□□□□ 0.12
BRCC3-202ENST00000340647 OR14A16Q8NHC5 309 aa15.81■□□□□ 0.12
BRCC3-202ENST00000340647 PHF3Q92576 2039 aaKnown RBP15.81■□□□□ 0.12
BRCC3-202ENST00000340647 MTFMTQ96DP5 389 aaKnown RBP15.81■□□□□ 0.12
BRCC3-202ENST00000340647 OR8D2Q9GZM6 311 aa15.81■□□□□ 0.12
BRCC3-202ENST00000340647 TSPYL1Q9H0U9 437 aa15.81■□□□□ 0.12
BRCC3-202ENST00000340647 RPF2Q9H7B2 306 aaKnown RBP15.81■□□□□ 0.12
BRCC3-202ENST00000340647 ANGPTL3Q9Y5C1 460 aa15.81■□□□□ 0.12
BRCC3-202ENST00000340647 TNPO3Q9Y5L0 923 aaKnown RBP15.81■□□□□ 0.12
BRCC3-202ENST00000340647 CLCA3PQ9Y6N3 262 aa15.81■□□□□ 0.12
BRCC3-202ENST00000340647 APCP25054 2843 aa15.81■□□□□ 0.12
BRCC3-202ENST00000340647 PEX1O43933 1283 aa15.8■□□□□ 0.12
BRCC3-202ENST00000340647 CLDN9O95484 217 aa15.8■□□□□ 0.12
BRCC3-202ENST00000340647 NADKO95544 446 aaPredicted RBP15.8■□□□□ 0.12
BRCC3-202ENST00000340647 GBAP04062 536 aa15.8■□□□□ 0.12
BRCC3-202ENST00000340647 ABHD2P08910 425 aa15.8■□□□□ 0.12
BRCC3-202ENST00000340647 RBP1P09455 135 aa15.8■□□□□ 0.12
BRCC3-202ENST00000340647 COL6A2P12110 1019 aa15.8■□□□□ 0.12
BRCC3-202ENST00000340647 SSR4P51571 173 aa15.8■□□□□ 0.12
BRCC3-202ENST00000340647 PER3P56645 1201 aa15.8■□□□□ 0.12
BRCC3-202ENST00000340647 SERTAD2Q14140 314 aa15.8■□□□□ 0.12
BRCC3-202ENST00000340647 RCN2Q14257 317 aa15.8■□□□□ 0.12
BRCC3-202ENST00000340647 ZNF750Q32MQ0 723 aa15.8■□□□□ 0.12
BRCC3-202ENST00000340647 CMPK2Q5EBM0 449 aa15.8■□□□□ 0.12
BRCC3-202ENST00000340647 ADGRD1Q6QNK2 874 aa15.8■□□□□ 0.12
BRCC3-202ENST00000340647 HSDL2Q6YN16 418 aa15.8■□□□□ 0.12
BRCC3-202ENST00000340647 TIFABQ6ZNK6 161 aa15.8■□□□□ 0.12
BRCC3-202ENST00000340647 CEP128Q6ZU80 1094 aa15.8■□□□□ 0.12
BRCC3-202ENST00000340647 C9orf40Q8IXQ3 194 aa15.8■□□□□ 0.12
BRCC3-202ENST00000340647 TMEM156Q8N614 296 aa15.8■□□□□ 0.12
BRCC3-202ENST00000340647 OR8K3Q8NH51 312 aa15.8■□□□□ 0.12
BRCC3-202ENST00000340647 ZNF483Q8TF39 744 aaPredicted RBP15.8■□□□□ 0.12
BRCC3-202ENST00000340647 MZB1Q8WU39 189 aa15.8■□□□□ 0.12
BRCC3-202ENST00000340647 DAZLQ92904 295 aaKnown RBP15.8■□□□□ 0.12
BRCC3-202ENST00000340647 SENP5Q96HI0 755 aaPredicted RBP15.8■□□□□ 0.12
BRCC3-202ENST00000340647 SCYL1Q96KG9 808 aa15.8■□□□□ 0.12
BRCC3-202ENST00000340647 PHF12Q96QT6 1004 aa15.8■□□□□ 0.12
BRCC3-202ENST00000340647 C1QTNF3Q9BXJ4 246 aa15.8■□□□□ 0.12
BRCC3-202ENST00000340647 FARSBQ9NSD9 589 aaKnown RBP15.8■□□□□ 0.12
BRCC3-202ENST00000340647 TMEM216Q9P0N5 145 aa15.8■□□□□ 0.12
BRCC3-202ENST00000340647 CSMD2Q7Z408 3487 aa15.8■□□□□ 0.12
BRCC3-202ENST00000340647 PKDREJQ9NTG1 2253 aa15.8■□□□□ 0.12
BRCC3-202ENST00000340647 A0A087WUV0 522 aaPredicted RBP15.79■□□□□ 0.12
BRCC3-202ENST00000340647 GLOD5A6NK44 160 aa15.79■□□□□ 0.12
BRCC3-202ENST00000340647 A8MT66 165 aa15.79■□□□□ 0.12
BRCC3-202ENST00000340647 PGRMC2O15173 223 aa15.79■□□□□ 0.12
BRCC3-202ENST00000340647 RIPK2O43353 540 aa15.79■□□□□ 0.12
BRCC3-202ENST00000340647 PRF1P14222 555 aa15.79■□□□□ 0.12
BRCC3-202ENST00000340647 TSPAN8P19075 237 aa15.79■□□□□ 0.12
BRCC3-202ENST00000340647 CDH13P55290 713 aa15.79■□□□□ 0.12
BRCC3-202ENST00000340647 LETMD1Q6P1Q0 360 aa15.79■□□□□ 0.12
BRCC3-202ENST00000340647 IL20RBQ6UXL0 311 aa15.79■□□□□ 0.12
BRCC3-202ENST00000340647 DOLPP1Q86YN1 238 aa15.79■□□□□ 0.12
BRCC3-202ENST00000340647 PSD4Q8NDX1 1056 aa15.79■□□□□ 0.12
BRCC3-202ENST00000340647 OR4F6Q8NGB9 312 aa15.79■□□□□ 0.12
BRCC3-202ENST00000340647 OR52N2Q8NGI0 321 aa15.79■□□□□ 0.12
BRCC3-202ENST00000340647 MRPL57Q9BQC6 102 aaKnown RBP15.79■□□□□ 0.12
BRCC3-202ENST00000340647 SH2D2AQ9NP31 389 aa15.79■□□□□ 0.12
BRCC3-202ENST00000340647 PLSCR2Q9NRY7 297 aa15.79■□□□□ 0.12
BRCC3-202ENST00000340647 TEX10Q9NXF1 929 aaPredicted RBP15.79■□□□□ 0.12
BRCC3-202ENST00000340647 KLF13Q9Y2Y9 288 aaPredicted RBP15.79■□□□□ 0.12
BRCC3-202ENST00000340647 HS6ST1O60243 411 aa15.78■□□□□ 0.12
BRCC3-202ENST00000340647 KRT38O76015 456 aa15.78■□□□□ 0.12
BRCC3-202ENST00000340647 AIFM1O95831 613 aa15.78■□□□□ 0.12
BRCC3-202ENST00000340647 TUBB4AP04350 444 aa15.78■□□□□ 0.12
BRCC3-202ENST00000340647 SNRPAP09012 282 aaKnown RBP15.78■□□□□ 0.12
BRCC3-202ENST00000340647 FAM58BPP0C7Q3 252 aa15.78■□□□□ 0.12
BRCC3-202ENST00000340647 ZNF24P17028 368 aa15.78■□□□□ 0.12
BRCC3-202ENST00000340647 CNTFP26441 200 aa15.78■□□□□ 0.12
BRCC3-202ENST00000340647 SOX18P35713 384 aa15.78■□□□□ 0.12
BRCC3-202ENST00000340647 RAP1GDS1P52306 607 aa15.78■□□□□ 0.12
BRCC3-202ENST00000340647 TSNAXIP1Q2TAA8 658 aa15.78■□□□□ 0.12
BRCC3-202ENST00000340647 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.78■□□□□ 0.12
BRCC3-202ENST00000340647 GGTA1PQ4G0N0 100 aa15.78■□□□□ 0.12
BRCC3-202ENST00000340647 FRG2Q64ET8 278 aa15.78■□□□□ 0.12
BRCC3-202ENST00000340647 SP5Q6BEB4 398 aaPredicted RBP15.78■□□□□ 0.12
BRCC3-202ENST00000340647 MRGPRGQ86SM5 289 aa15.78■□□□□ 0.12
BRCC3-202ENST00000340647 TANKQ92844 425 aa15.78■□□□□ 0.12
BRCC3-202ENST00000340647 TMEM125Q96AQ2 219 aa15.78■□□□□ 0.12
BRCC3-202ENST00000340647 FRG2BQ96QU4 278 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms