RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 AP3M1Q9Y2T2 418 aa7□□□□□ -1.29
SRFBP1-201ENST00000339397 TESMINQ9Y4I5 508 aa7□□□□□ -1.29
SRFBP1-201ENST00000339397 PCDHGA8Q9Y5G5 932 aa7□□□□□ -1.29
SRFBP1-201ENST00000339397 KCNE3Q9Y6H6 103 aa7□□□□□ -1.29
SRFBP1-201ENST00000339397 UNC13CQ8NB66 2214 aa7□□□□□ -1.29
SRFBP1-201ENST00000339397 ARID1BQ8NFD5 2236 aaPredicted RBP7□□□□□ -1.29
SRFBP1-201ENST00000339397 OR2A25A4D2G3 310 aa7□□□□□ -1.29
SRFBP1-201ENST00000339397 HMGN4O00479 90 aa7□□□□□ -1.29
SRFBP1-201ENST00000339397 PROM1O43490 865 aa7□□□□□ -1.29
SRFBP1-201ENST00000339397 SEMA7AO75326 666 aa7□□□□□ -1.29
SRFBP1-201ENST00000339397 ALBP02768 609 aa7□□□□□ -1.29
SRFBP1-201ENST00000339397 FABP3P05413 133 aa7□□□□□ -1.29
SRFBP1-201ENST00000339397 OR12D1P0DN82 309 aa7□□□□□ -1.29
SRFBP1-201ENST00000339397 IL7RP16871 459 aa7□□□□□ -1.29
SRFBP1-201ENST00000339397 UQCRC2P22695 453 aa7□□□□□ -1.29
SRFBP1-201ENST00000339397 PCGF2P35227 344 aa7□□□□□ -1.29
SRFBP1-201ENST00000339397 FRKP42685 505 aaPredicted RBP7□□□□□ -1.29
SRFBP1-201ENST00000339397 CCT3P49368 545 aaKnown RBP7□□□□□ -1.29
SRFBP1-201ENST00000339397 NCBP2P52298 156 aaKnown RBP eCLIP7□□□□□ -1.29
SRFBP1-201ENST00000339397 PIGFQ07326 219 aa7□□□□□ -1.29
SRFBP1-201ENST00000339397 SIM2Q14190 667 aaPredicted RBP7□□□□□ -1.29
SRFBP1-201ENST00000339397 LTB4RQ15722 352 aa7□□□□□ -1.29
SRFBP1-201ENST00000339397 GCNT6Q5T4J0 391 aa7□□□□□ -1.29
SRFBP1-201ENST00000339397 ERICH5Q6P6B1 374 aa7□□□□□ -1.29
SRFBP1-201ENST00000339397 TTC33Q6PID6 262 aaPredicted RBP7□□□□□ -1.29
SRFBP1-201ENST00000339397 Q6ZPB1 254 aaPredicted RBP7□□□□□ -1.29
SRFBP1-201ENST00000339397 USP51Q70EK9 711 aa7□□□□□ -1.29
SRFBP1-201ENST00000339397 RBM45Q8IUH3 476 aaKnown RBP7□□□□□ -1.29
SRFBP1-201ENST00000339397 ADHFE1Q8IWW8 467 aa7□□□□□ -1.29
SRFBP1-201ENST00000339397 TRIML2Q8N7C3 387 aa7□□□□□ -1.29
SRFBP1-201ENST00000339397 MFSD9Q8NBP5 474 aa7□□□□□ -1.29
SRFBP1-201ENST00000339397 TSPAN14Q8NG11 270 aa7□□□□□ -1.29
SRFBP1-201ENST00000339397 UTP15Q8TED0 518 aaKnown RBP7□□□□□ -1.29
SRFBP1-201ENST00000339397 XAGE5Q8WWM1 108 aa7□□□□□ -1.29
SRFBP1-201ENST00000339397 KAT2AQ92830 837 aa7□□□□□ -1.29
SRFBP1-201ENST00000339397 COL26A1Q96A83 441 aa7□□□□□ -1.29
SRFBP1-201ENST00000339397 ZG16BQ96DA0 208 aa7□□□□□ -1.29
SRFBP1-201ENST00000339397 KCNC2Q96PR1 638 aa7□□□□□ -1.29
SRFBP1-201ENST00000339397 NLNQ9BYT8 704 aa7□□□□□ -1.29
SRFBP1-201ENST00000339397 QRSL1Q9H0R6 528 aaKnown RBP7□□□□□ -1.29
SRFBP1-201ENST00000339397 RLIMQ9NVW2 624 aa7□□□□□ -1.29
SRFBP1-201ENST00000339397 CES1P1Q9UKY3 287 aa7□□□□□ -1.29
SRFBP1-201ENST00000339397 SNX7Q9UNH6 387 aa7□□□□□ -1.29
SRFBP1-201ENST00000339397 SAMHD1Q9Y3Z3 626 aaKnown RBP7□□□□□ -1.29
SRFBP1-201ENST00000339397 LRP4O75096 1905 aa7□□□□□ -1.29
SRFBP1-201ENST00000339397 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 OR2W5A6NFC9 320 aa6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 FAM227AF5H4B4 570 aa6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 AGXTP21549 392 aa6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 RRM2P31350 389 aa6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 AHRP35869 848 aa6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 GSSP48637 474 aa6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 CLCN2P51788 898 aa6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 UBE2IP63279 158 aaKnown RBP6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 ABATP80404 500 aa6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 SIM1P81133 766 aaPredicted RBP6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 HHEXQ03014 270 aa6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 DMWDQ09019 674 aa6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 SFSWAPQ12872 951 aaKnown RBP6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 APOFQ13790 326 aa6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 RUNX2Q13950 521 aa6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 PUM1Q14671 1186 aaKnown RBP eCLIP6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 GANABQ14697 944 aaKnown RBP6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 MEP1AQ16819 746 aa6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 SPDYE7PQ495Y7 208 aa6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 SAXO2Q658L1 398 aa6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 LAIR2Q6ISS4 152 aa6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 TRIM40Q6P9F5 258 aa6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 TMEM107Q6UX40 140 aa6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 EID3Q8N140 333 aa6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 OR5K1Q8NHB7 308 aa6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 ZFP28Q8NHY6 868 aa6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 KLHL6Q8WZ60 621 aa6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 OR5P2Q8WZ92 322 aa6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 RNF31Q96EP0 1072 aa6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 KLHDC7BQ96G42 594 aa6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 RMND5BQ96G75 393 aaPredicted RBP6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 DOHHQ9BU89 302 aa6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 SARGQ9BW04 601 aa6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 RUBCNLQ9H714 662 aa6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 EQTNQ9NQ60 294 aa6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 PNPLA3Q9NST1 481 aa6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 PDP1Q9P0J1 537 aaPredicted RBP6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 PILRAQ9UKJ1 303 aa6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 FBXL21Q9UKT6 434 aa6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 MAPRE3Q9UPY8 281 aa6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 MYRFQ9Y2G1 1151 aa6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 GMEB1Q9Y692 573 aa6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 H0YGG7 62 aa6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 H3BSA7 217 aa6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 MYF5P13349 255 aa6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 PCSK2P16519 638 aa6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 GPC1P35052 558 aa6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 CSNK1EP49674 416 aaKnown RBP6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 CCR5P51681 352 aa6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 DSTNP60981 165 aa6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 ARF3P61204 181 aaPredicted RBP6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 CTU2Q2VPK5 515 aaKnown RBP6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 PATL1Q86TB9 770 aaKnown RBP6.99□□□□□ -1.29
SRFBP1-201ENST00000339397 ARL10Q8N8L6 244 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms