RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 IFT81Q8WYA0 676 aa12.38□□□□□ -0.43
NUDCD3-201ENST00000338427 DAZLQ92904 295 aaKnown RBP12.38□□□□□ -0.43
NUDCD3-201ENST00000338427 UBE2E3Q969T4 207 aa12.38□□□□□ -0.43
NUDCD3-201ENST00000338427 SDCCAG3Q96C92 435 aa12.38□□□□□ -0.43
NUDCD3-201ENST00000338427 PHF21BQ96EK2 531 aa12.38□□□□□ -0.43
NUDCD3-201ENST00000338427 NSUN5Q96P11 429 aaKnown RBP12.38□□□□□ -0.43
NUDCD3-201ENST00000338427 ZNF717Q9BY31 904 aaPredicted RBP12.38□□□□□ -0.43
NUDCD3-201ENST00000338427 UCK2Q9BZX2 261 aa12.38□□□□□ -0.43
NUDCD3-201ENST00000338427 RPF2Q9H7B2 306 aaKnown RBP12.38□□□□□ -0.43
NUDCD3-201ENST00000338427 IPPKQ9H8X2 491 aa12.38□□□□□ -0.43
NUDCD3-201ENST00000338427 ACTR8Q9H981 624 aa12.38□□□□□ -0.43
NUDCD3-201ENST00000338427 DMRT3Q9NQL9 472 aa12.38□□□□□ -0.43
NUDCD3-201ENST00000338427 PPT2Q9UMR5 302 aa12.38□□□□□ -0.43
NUDCD3-201ENST00000338427 ASB4Q9Y574 426 aa12.38□□□□□ -0.43
NUDCD3-201ENST00000338427 LIPGQ9Y5X9 500 aa12.38□□□□□ -0.43
NUDCD3-201ENST00000338427 PDZD2O15018 2839 aa12.37□□□□□ -0.43
NUDCD3-201ENST00000338427 DCHS2Q6V1P9 2916 aa12.37□□□□□ -0.43
NUDCD3-201ENST00000338427 A0A1B0GTL3 188 aa12.37□□□□□ -0.43
NUDCD3-201ENST00000338427 NPIPA2E9PIF3 369 aa12.37□□□□□ -0.43
NUDCD3-201ENST00000338427 NPIPA3F8WFD2 350 aa12.37□□□□□ -0.43
NUDCD3-201ENST00000338427 PPP6CO00743 305 aa12.37□□□□□ -0.43
NUDCD3-201ENST00000338427 CDK2AP1O14519 115 aa12.37□□□□□ -0.43
NUDCD3-201ENST00000338427 OR7A17O14581 309 aa12.37□□□□□ -0.43
NUDCD3-201ENST00000338427 PGRMC2O15173 223 aa12.37□□□□□ -0.43
NUDCD3-201ENST00000338427 PROM1O43490 865 aa12.37□□□□□ -0.43
NUDCD3-201ENST00000338427 KLK8O60259 260 aa12.37□□□□□ -0.43
NUDCD3-201ENST00000338427 SCELO95171 688 aa12.37□□□□□ -0.43
NUDCD3-201ENST00000338427 ACSL3O95573 720 aa12.37□□□□□ -0.43
NUDCD3-201ENST00000338427 CELA3AP09093 270 aa12.37□□□□□ -0.43
NUDCD3-201ENST00000338427 CCL3P10147 92 aa12.37□□□□□ -0.43
NUDCD3-201ENST00000338427 CNR1P21554 472 aa12.37□□□□□ -0.43
NUDCD3-201ENST00000338427 PIGAP37287 484 aa12.37□□□□□ -0.43
NUDCD3-201ENST00000338427 RAP1GDS1P52306 607 aa12.37□□□□□ -0.43
NUDCD3-201ENST00000338427 PLGLB1Q02325 96 aa12.37□□□□□ -0.43
NUDCD3-201ENST00000338427 NAB1Q13506 487 aa12.37□□□□□ -0.43
NUDCD3-201ENST00000338427 SERTAD2Q14140 314 aa12.37□□□□□ -0.43
NUDCD3-201ENST00000338427 RCN2Q14257 317 aa12.37□□□□□ -0.43
NUDCD3-201ENST00000338427 NAA30Q147X3 362 aaPredicted RBP12.37□□□□□ -0.43
NUDCD3-201ENST00000338427 ACAP2Q15057 778 aa12.37□□□□□ -0.43
NUDCD3-201ENST00000338427 FAM83EQ2M2I3 478 aa12.37□□□□□ -0.43
NUDCD3-201ENST00000338427 PIGGQ5H8A4 983 aa12.37□□□□□ -0.43
NUDCD3-201ENST00000338427 C8orf74Q6P047 294 aa12.37□□□□□ -0.43
NUDCD3-201ENST00000338427 TMEM64Q6YI46 380 aa12.37□□□□□ -0.43
NUDCD3-201ENST00000338427 PTGR2Q8N8N7 351 aaPredicted RBP12.37□□□□□ -0.43
NUDCD3-201ENST00000338427 POGLUT1Q8NBL1 392 aa12.37□□□□□ -0.43
NUDCD3-201ENST00000338427 OR5M9Q8NGP3 310 aa12.37□□□□□ -0.43
NUDCD3-201ENST00000338427 OR14A16Q8NHC5 309 aa12.37□□□□□ -0.43
NUDCD3-201ENST00000338427 RHEBL1Q8TAI7 183 aa12.37□□□□□ -0.43
NUDCD3-201ENST00000338427 ZNF592Q92610 1267 aa12.37□□□□□ -0.43
NUDCD3-201ENST00000338427 C16orf45Q96MC5 204 aaPredicted RBP12.37□□□□□ -0.43
NUDCD3-201ENST00000338427 DGAT2Q96PD7 388 aa12.37□□□□□ -0.43
NUDCD3-201ENST00000338427 ROGDIQ9GZN7 287 aa12.37□□□□□ -0.43
NUDCD3-201ENST00000338427 NOL11Q9H8H0 719 aaKnown RBP12.37□□□□□ -0.43
NUDCD3-201ENST00000338427 TUBA8Q9NY65 449 aaPredicted RBP12.37□□□□□ -0.43
NUDCD3-201ENST00000338427 ABCA12Q86UK0 2595 aa12.37□□□□□ -0.43
NUDCD3-201ENST00000338427 MYO9AB2RTY4 2548 aa12.36□□□□□ -0.43
NUDCD3-201ENST00000338427 DNAJC13O75165 2243 aa12.36□□□□□ -0.43
NUDCD3-201ENST00000338427 E9PLN8 166 aa12.36□□□□□ -0.43
NUDCD3-201ENST00000338427 POC1B-GALNT4F8VUJ3 575 aa12.36□□□□□ -0.43
NUDCD3-201ENST00000338427 LRATO95237 230 aa12.36□□□□□ -0.43
NUDCD3-201ENST00000338427 NADKO95544 446 aaPredicted RBP12.36□□□□□ -0.43
NUDCD3-201ENST00000338427 TUBB4AP04350 444 aa12.36□□□□□ -0.43
NUDCD3-201ENST00000338427 COX6B1P14854 86 aa12.36□□□□□ -0.43
NUDCD3-201ENST00000338427 TSPAN8P19075 237 aa12.36□□□□□ -0.43
NUDCD3-201ENST00000338427 PTX3P26022 381 aaPredicted RBP12.36□□□□□ -0.43
NUDCD3-201ENST00000338427 HPDP32754 393 aaPredicted RBP12.36□□□□□ -0.43
NUDCD3-201ENST00000338427 STT3AP46977 705 aa12.36□□□□□ -0.43
NUDCD3-201ENST00000338427 ALDH18A1P54886 795 aaKnown RBP12.36□□□□□ -0.43
NUDCD3-201ENST00000338427 IGLV3-21P80748 117 aaPredicted RBP12.36□□□□□ -0.43
NUDCD3-201ENST00000338427 ZNF267Q14586 743 aaPredicted RBP12.36□□□□□ -0.43
NUDCD3-201ENST00000338427 PCBP2Q15366 365 aaKnown RBP eCLIP12.36□□□□□ -0.432e-12■■■□□ 16
NUDCD3-201ENST00000338427 GXYLT1Q4G148 440 aa12.36□□□□□ -0.43
NUDCD3-201ENST00000338427 SGO1Q5FBB7 561 aa12.36□□□□□ -0.43
NUDCD3-201ENST00000338427 TECRLQ5HYJ1 363 aa12.36□□□□□ -0.43
NUDCD3-201ENST00000338427 LIPJQ5W064 366 aa12.36□□□□□ -0.43
NUDCD3-201ENST00000338427 MRM1Q6IN84 353 aaKnown RBP12.36□□□□□ -0.43
NUDCD3-201ENST00000338427 LYPD8Q6UX82 237 aa12.36□□□□□ -0.43
NUDCD3-201ENST00000338427 CCDC71Q8IV32 467 aaPredicted RBP12.36□□□□□ -0.43
NUDCD3-201ENST00000338427 C9orf40Q8IXQ3 194 aa12.36□□□□□ -0.43
NUDCD3-201ENST00000338427 TMEM251Q8N6I4 163 aa12.36□□□□□ -0.43
NUDCD3-201ENST00000338427 OR52B6Q8NGF0 335 aa12.36□□□□□ -0.43
NUDCD3-201ENST00000338427 WDR20Q8TBZ3 569 aa12.36□□□□□ -0.43
NUDCD3-201ENST00000338427 RBM18Q96H35 190 aaKnown RBP12.36□□□□□ -0.43
NUDCD3-201ENST00000338427 VKORC1Q9BQB6 163 aa12.36□□□□□ -0.43
NUDCD3-201ENST00000338427 TTTY12Q9BZ98 90 aa12.36□□□□□ -0.43
NUDCD3-201ENST00000338427 CDC42EP4Q9H3Q1 356 aaKnown RBP12.36□□□□□ -0.43
NUDCD3-201ENST00000338427 ACSS3Q9H6R3 686 aa12.36□□□□□ -0.43
NUDCD3-201ENST00000338427 ZBTB26Q9HCK0 441 aa12.36□□□□□ -0.43
NUDCD3-201ENST00000338427 CHST11Q9NPF2 352 aa12.36□□□□□ -0.43
NUDCD3-201ENST00000338427 PCDHGA11Q9Y5H2 935 aa12.36□□□□□ -0.43
NUDCD3-201ENST00000338427 NINQ8N4C6 2090 aa12.36□□□□□ -0.43
NUDCD3-201ENST00000338427 A0A0A6YYD5 115 aa12.35□□□□□ -0.43
NUDCD3-201ENST00000338427 ATP6AP2A0A1C7CYW4 349 aa12.35□□□□□ -0.43
NUDCD3-201ENST00000338427 SYCE1LA8MT33 242 aa12.35□□□□□ -0.43
NUDCD3-201ENST00000338427 H0YIV9 168 aa12.35□□□□□ -0.43
NUDCD3-201ENST00000338427 ATP6AP2O75787 350 aa12.35□□□□□ -0.43
NUDCD3-201ENST00000338427 GPR75O95800 540 aa12.35□□□□□ -0.43
NUDCD3-201ENST00000338427 CLPSP04118 112 aa12.35□□□□□ -0.43
NUDCD3-201ENST00000338427 IGKV3-11P04433 115 aa12.35□□□□□ -0.43
NUDCD3-201ENST00000338427 RFPL3SP0C7P2 107 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms