RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 ATP1A4Q13733 1029 aa11.17□□□□□ -0.62
SPTLC1-202ENST00000337841 ATP1A1-AS1Q5TC04 95 aa11.17□□□□□ -0.62
SPTLC1-202ENST00000337841 FAM71E1Q6IPT2 247 aa11.17□□□□□ -0.62
SPTLC1-202ENST00000337841 SLC48A1Q6P1K1 146 aa11.17□□□□□ -0.62
SPTLC1-202ENST00000337841 EPGNQ6UW88 154 aa11.17□□□□□ -0.62
SPTLC1-202ENST00000337841 LANCL3Q6ZV70 420 aa11.17□□□□□ -0.62
SPTLC1-202ENST00000337841 ACAD11Q709F0 780 aa11.17□□□□□ -0.62
SPTLC1-202ENST00000337841 LARP4Q71RC2 724 aaKnown RBP eCLIP11.17□□□□□ -0.62
SPTLC1-202ENST00000337841 OR4N5Q8IXE1 308 aa11.17□□□□□ -0.62
SPTLC1-202ENST00000337841 CLEC1AQ8NC01 280 aa11.17□□□□□ -0.62
SPTLC1-202ENST00000337841 CEP70Q8NHQ1 597 aa11.17□□□□□ -0.62
SPTLC1-202ENST00000337841 DNAJB14Q8TBM8 379 aa11.17□□□□□ -0.62
SPTLC1-202ENST00000337841 ACTRT2Q8TDY3 377 aa11.17□□□□□ -0.62
SPTLC1-202ENST00000337841 APOBEC4Q8WW27 367 aaKnown RBP11.17□□□□□ -0.62
SPTLC1-202ENST00000337841 TSLPQ969D9 159 aa11.17□□□□□ -0.62
SPTLC1-202ENST00000337841 DGAT2Q96PD7 388 aa11.17□□□□□ -0.62
SPTLC1-202ENST00000337841 PRORYQ9H606 182 aa11.17□□□□□ -0.62
SPTLC1-202ENST00000337841 CCDC134Q9H6E4 229 aa11.17□□□□□ -0.62
SPTLC1-202ENST00000337841 WDR55Q9H6Y2 383 aaPredicted RBP11.17□□□□□ -0.62
SPTLC1-202ENST00000337841 MIEF1Q9NQG6 463 aa11.17□□□□□ -0.62
SPTLC1-202ENST00000337841 PNO1Q9NRX1 252 aaKnown RBP11.17□□□□□ -0.62
SPTLC1-202ENST00000337841 GIMAP4Q9NUV9 329 aa11.17□□□□□ -0.62
SPTLC1-202ENST00000337841 NOP53Q9NZM5 478 aaKnown RBP11.17□□□□□ -0.62
SPTLC1-202ENST00000337841 EHD3Q9NZN3 535 aa11.17□□□□□ -0.62
SPTLC1-202ENST00000337841 GIMAP2Q9UG22 337 aa11.17□□□□□ -0.62
SPTLC1-202ENST00000337841 BAIAP2L1Q9UHR4 511 aa11.17□□□□□ -0.62
SPTLC1-202ENST00000337841 FBXL4Q9UKA2 621 aa11.17□□□□□ -0.62
SPTLC1-202ENST00000337841 MAPRE3Q9UPY8 281 aa11.17□□□□□ -0.62
SPTLC1-202ENST00000337841 CLCA3PQ9Y6N3 262 aa11.17□□□□□ -0.62
SPTLC1-202ENST00000337841 IGHV1-45A0A0A0MS14 117 aa11.16□□□□□ -0.62
SPTLC1-202ENST00000337841 GOLGA8QA0A0J9YX86 632 aa11.16□□□□□ -0.62
SPTLC1-202ENST00000337841 A0A1W2PQ72 361 aa11.16□□□□□ -0.62
SPTLC1-202ENST00000337841 GOLGA8OA6NCC3 632 aa11.16□□□□□ -0.62
SPTLC1-202ENST00000337841 WASHC1A8K0Z3 465 aa11.16□□□□□ -0.62
SPTLC1-202ENST00000337841 A8MUA0 341 aa11.16□□□□□ -0.62
SPTLC1-202ENST00000337841 GOLGA8NF8WBI6 632 aa11.16□□□□□ -0.62
SPTLC1-202ENST00000337841 FGF17O60258 216 aa11.16□□□□□ -0.62
SPTLC1-202ENST00000337841 OR10H2O60403 315 aa11.16□□□□□ -0.62
SPTLC1-202ENST00000337841 KLHL41O60662 606 aa11.16□□□□□ -0.62
SPTLC1-202ENST00000337841 PRKRAO75569 313 aaKnown RBP11.16□□□□□ -0.62
SPTLC1-202ENST00000337841 ERAL1O75616 437 aaKnown RBP11.16□□□□□ -0.62
SPTLC1-202ENST00000337841 ITGB2P05107 769 aa11.16□□□□□ -0.62
SPTLC1-202ENST00000337841 PRR35P0CG20 571 aa11.16□□□□□ -0.62
SPTLC1-202ENST00000337841 SLC35E2P0CK97 266 aa11.16□□□□□ -0.62
SPTLC1-202ENST00000337841 TROVE2P10155 538 aaKnown RBP eCLIP11.16□□□□□ -0.62
SPTLC1-202ENST00000337841 ALOX15P16050 662 aaPredicted RBP11.16□□□□□ -0.62
SPTLC1-202ENST00000337841 PORP16435 677 aaPredicted RBP11.16□□□□□ -0.62
SPTLC1-202ENST00000337841 SDC1P18827 310 aa11.16□□□□□ -0.62
SPTLC1-202ENST00000337841 CSNK2A2P19784 350 aaPredicted RBP11.16□□□□□ -0.62
SPTLC1-202ENST00000337841 DDCP20711 480 aa11.16□□□□□ -0.62
SPTLC1-202ENST00000337841 EPHA3P29320 983 aa11.16□□□□□ -0.62
SPTLC1-202ENST00000337841 RPL3P39023 403 aaKnown RBP11.16□□□□□ -0.62
SPTLC1-202ENST00000337841 AQP5P55064 265 aa11.16□□□□□ -0.62
SPTLC1-202ENST00000337841 IGLV3-21P80748 117 aaPredicted RBP11.16□□□□□ -0.62
SPTLC1-202ENST00000337841 ID2Q02363 134 aa11.16□□□□□ -0.62
SPTLC1-202ENST00000337841 FOLH1Q04609 750 aa11.16□□□□□ -0.62
SPTLC1-202ENST00000337841 AIMP2Q13155 320 aaKnown RBP11.16□□□□□ -0.62
SPTLC1-202ENST00000337841 RPS6KA2Q15349 733 aa11.16□□□□□ -0.62
SPTLC1-202ENST00000337841 ELAVL1Q15717 326 aaKnown RBP11.16□□□□□ -0.62
SPTLC1-202ENST00000337841 EXT1Q16394 746 aa11.16□□□□□ -0.62
SPTLC1-202ENST00000337841 DCAF10Q5QP82 559 aa11.16□□□□□ -0.62
SPTLC1-202ENST00000337841 VWA5B1Q5TIE3 1220 aa11.16□□□□□ -0.62
SPTLC1-202ENST00000337841 IRAK1BP1Q5VVH5 260 aa11.16□□□□□ -0.62
SPTLC1-202ENST00000337841 BORAQ6PGQ7 559 aa11.16□□□□□ -0.62
SPTLC1-202ENST00000337841 PAPD4Q6PIY7 484 aaKnown RBP11.16□□□□□ -0.62
SPTLC1-202ENST00000337841 R3HCC1LQ7Z5L2 792 aaKnown RBP11.16□□□□□ -0.62
SPTLC1-202ENST00000337841 APLFQ8IW19 511 aaPredicted RBP11.16□□□□□ -0.62
SPTLC1-202ENST00000337841 LIX1Q8N485 282 aa11.16□□□□□ -0.62
SPTLC1-202ENST00000337841 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.16□□□□□ -0.62
SPTLC1-202ENST00000337841 DAZLQ92904 295 aaKnown RBP11.16□□□□□ -0.62
SPTLC1-202ENST00000337841 UCN3Q969E3 161 aa11.16□□□□□ -0.62
SPTLC1-202ENST00000337841 KLHL29Q96CT2 875 aa11.16□□□□□ -0.62
SPTLC1-202ENST00000337841 TSSK3Q96PN8 268 aa11.16□□□□□ -0.62
SPTLC1-202ENST00000337841 PRPF18Q99633 342 aaKnown RBP11.16□□□□□ -0.62
SPTLC1-202ENST00000337841 SIKE1Q9BRV8 207 aa11.16□□□□□ -0.62
SPTLC1-202ENST00000337841 C1orf50Q9BV19 199 aa11.16□□□□□ -0.62
SPTLC1-202ENST00000337841 TRIM55Q9BYV6 548 aa11.16□□□□□ -0.62
SPTLC1-202ENST00000337841 ING2Q9H160 280 aa11.16□□□□□ -0.62
SPTLC1-202ENST00000337841 REEP4Q9H6H4 257 aa11.16□□□□□ -0.62
SPTLC1-202ENST00000337841 ZNF160Q9HCG1 818 aa11.16□□□□□ -0.62
SPTLC1-202ENST00000337841 ADAP2Q9NPF8 381 aa11.16□□□□□ -0.62
SPTLC1-202ENST00000337841 ASIC5Q9NY37 505 aa11.16□□□□□ -0.62
SPTLC1-202ENST00000337841 TAS2R7Q9NYW3 318 aa11.16□□□□□ -0.62
SPTLC1-202ENST00000337841 HEY2Q9UBP5 337 aa11.16□□□□□ -0.62
SPTLC1-202ENST00000337841 UTS2RQ9UKP6 389 aa11.16□□□□□ -0.62
SPTLC1-202ENST00000337841 CES1P1Q9UKY3 287 aa11.16□□□□□ -0.62
SPTLC1-202ENST00000337841 G3BP2Q9UN86 482 aaKnown RBP11.16□□□□□ -0.62
SPTLC1-202ENST00000337841 SCN3AQ9NY46 2000 aa11.16□□□□□ -0.62
SPTLC1-202ENST00000337841 IGHV3-20A0A0C4DH32 117 aa11.15□□□□□ -0.62
SPTLC1-202ENST00000337841 MYOCOSA0A1B0GUC4 107 aa11.15□□□□□ -0.62
SPTLC1-202ENST00000337841 ZNF195O14628 629 aa11.15□□□□□ -0.62
SPTLC1-202ENST00000337841 AKAP10O43572 662 aa11.15□□□□□ -0.62
SPTLC1-202ENST00000337841 SEC24DO94855 1032 aaPredicted RBP11.15□□□□□ -0.62
SPTLC1-202ENST00000337841 G6PDP11413 515 aa11.15□□□□□ -0.62
SPTLC1-202ENST00000337841 COX6A1P12074 109 aa11.15□□□□□ -0.62
SPTLC1-202ENST00000337841 PRPS1L1P21108 318 aa11.15□□□□□ -0.62
SPTLC1-202ENST00000337841 TACR1P25103 407 aa11.15□□□□□ -0.62
SPTLC1-202ENST00000337841 GALNSP34059 522 aa11.15□□□□□ -0.62
SPTLC1-202ENST00000337841 MPIP34949 423 aa11.15□□□□□ -0.62
SPTLC1-202ENST00000337841 STT3AP46977 705 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms