RNA–Protein interactions for RNA: ENST00000336219.3

CDCA4-201, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-201ENST00000336219 MTCL1Q9Y4B5 1905 aaKnown RBP18.96■□□□□ 0.63
CDCA4-201ENST00000336219 TGFB1P01137 390 aa18.96■□□□□ 0.63
CDCA4-201ENST00000336219 CHI3L1P36222 383 aaPredicted RBP18.96■□□□□ 0.63
CDCA4-201ENST00000336219 OPRD1P41143 372 aa18.96■□□□□ 0.63
CDCA4-201ENST00000336219 RORCP51449 518 aa18.96■□□□□ 0.63
CDCA4-201ENST00000336219 CD83Q01151 205 aa18.96■□□□□ 0.63
CDCA4-201ENST00000336219 C2orf80Q0P641 193 aa18.96■□□□□ 0.63
CDCA4-201ENST00000336219 UAP1L1Q3KQV9 507 aa18.96■□□□□ 0.63
CDCA4-201ENST00000336219 CRB2Q5IJ48 1285 aa18.96■□□□□ 0.63
CDCA4-201ENST00000336219 VN1R5Q7Z5H4 357 aa18.96■□□□□ 0.63
CDCA4-201ENST00000336219 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.96■□□□□ 0.63
CDCA4-201ENST00000336219 TRIM48Q8IWZ4 208 aa18.96■□□□□ 0.63
CDCA4-201ENST00000336219 WDR48Q8TAF3 677 aa18.96■□□□□ 0.63
CDCA4-201ENST00000336219 SETD6Q8TBK2 473 aa18.96■□□□□ 0.63
CDCA4-201ENST00000336219 AP2M1Q96CW1 435 aa18.96■□□□□ 0.63
CDCA4-201ENST00000336219 OR51B5Q9H339 312 aa18.96■□□□□ 0.63
CDCA4-201ENST00000336219 SLC25A19Q9HC21 320 aa18.96■□□□□ 0.63
CDCA4-201ENST00000336219 SNX11Q9Y5W9 270 aa18.96■□□□□ 0.63
CDCA4-201ENST00000336219 MAU2Q9Y6X3 613 aa18.96■□□□□ 0.63
CDCA4-201ENST00000336219 A0A0B4J293 547 aa18.95■□□□□ 0.62
CDCA4-201ENST00000336219 PIPSLA2A3N6 862 aa18.95■□□□□ 0.62
CDCA4-201ENST00000336219 SH3D21A4FU49 640 aa18.95■□□□□ 0.62
CDCA4-201ENST00000336219 TLR4O00206 839 aa18.95■□□□□ 0.62
CDCA4-201ENST00000336219 KLHL18O94889 574 aa18.95■□□□□ 0.62
CDCA4-201ENST00000336219 CDRT1O95170 752 aa18.95■□□□□ 0.62
CDCA4-201ENST00000336219 XPAP23025 273 aaPredicted RBP18.95■□□□□ 0.62
CDCA4-201ENST00000336219 RPS26P62854 115 aaKnown RBP18.95■□□□□ 0.62
CDCA4-201ENST00000336219 DEFB103AP81534 67 aa18.95■□□□□ 0.62
CDCA4-201ENST00000336219 SEC23BQ15437 767 aa18.95■□□□□ 0.62
CDCA4-201ENST00000336219 SPHARQ15513 63 aa18.95■□□□□ 0.62
CDCA4-201ENST00000336219 POM121L1PQ3SYA9 428 aa18.95■□□□□ 0.62
CDCA4-201ENST00000336219 FAM131AQ6UXB0 335 aa18.95■□□□□ 0.62
CDCA4-201ENST00000336219 ZNF438Q7Z4V0 828 aa18.95■□□□□ 0.62
CDCA4-201ENST00000336219 GPR65Q8IYL9 337 aa18.95■□□□□ 0.62
CDCA4-201ENST00000336219 C16orf78Q8WTQ4 265 aa18.95■□□□□ 0.62
CDCA4-201ENST00000336219 RNF31Q96EP0 1072 aa18.95■□□□□ 0.62
CDCA4-201ENST00000336219 SLC6A18Q96N87 628 aa18.95■□□□□ 0.62
CDCA4-201ENST00000336219 GDF15Q99988 308 aa18.95■□□□□ 0.62
CDCA4-201ENST00000336219 MAPKAP1Q9BPZ7 522 aa18.95■□□□□ 0.62
CDCA4-201ENST00000336219 EFCAB11Q9BUY7 163 aa18.95■□□□□ 0.62
CDCA4-201ENST00000336219 RSPO3Q9BXY4 272 aaPredicted RBP18.95■□□□□ 0.62
CDCA4-201ENST00000336219 C11orf54Q9H0W9 315 aaPredicted RBP18.95■□□□□ 0.62
CDCA4-201ENST00000336219 MTG2Q9H4K7 406 aa18.95■□□□□ 0.62
CDCA4-201ENST00000336219 ENPP4Q9Y6X5 453 aa18.95■□□□□ 0.62
CDCA4-201ENST00000336219 GNRH1P01148 92 aa18.95■□□□□ 0.62
CDCA4-201ENST00000336219 C1GALT1C1LP0DN25 315 aa18.95■□□□□ 0.62
CDCA4-201ENST00000336219 PUM1Q14671 1186 aaKnown RBP eCLIP18.95■□□□□ 0.62
CDCA4-201ENST00000336219 ZNF658BQ4V348 819 aaPredicted RBP18.95■□□□□ 0.62
CDCA4-201ENST00000336219 CCDC58Q4VC31 144 aa18.95■□□□□ 0.62
CDCA4-201ENST00000336219 LILRA6Q6PI73 481 aa18.95■□□□□ 0.62
CDCA4-201ENST00000336219 FBXO15Q8NCQ5 510 aaPredicted RBP18.95■□□□□ 0.62
CDCA4-201ENST00000336219 FAM46DQ8NEK8 389 aa18.95■□□□□ 0.62
CDCA4-201ENST00000336219 MRGPRX3Q96LB0 322 aa18.95■□□□□ 0.62
CDCA4-201ENST00000336219 MIXL1Q9H2W2 232 aa18.95■□□□□ 0.62
CDCA4-201ENST00000336219 MYNNQ9NPC7 610 aa18.95■□□□□ 0.62
CDCA4-201ENST00000336219 HCFC1R1Q9NWW0 138 aa18.95■□□□□ 0.62
CDCA4-201ENST00000336219 DYRK1BQ9Y463 629 aa18.95■□□□□ 0.62
CDCA4-201ENST00000336219 CMAHPQ9Y471 501 aa18.95■□□□□ 0.62
CDCA4-201ENST00000336219 HMX3A6NHT5 357 aa18.94■□□□□ 0.62
CDCA4-201ENST00000336219 CENPBD1B2RD01 187 aa18.94■□□□□ 0.62
CDCA4-201ENST00000336219 MYCP01106 439 aaPredicted RBP18.94■□□□□ 0.62
CDCA4-201ENST00000336219 CSTF2P33240 577 aaKnown RBP eCLIP18.94■□□□□ 0.62
CDCA4-201ENST00000336219 RPL3P39023 403 aaKnown RBP18.94■□□□□ 0.62
CDCA4-201ENST00000336219 HMGA2P52926 109 aa18.94■□□□□ 0.62
CDCA4-201ENST00000336219 PCBP3P57721 371 aaKnown RBP18.94■□□□□ 0.62
CDCA4-201ENST00000336219 GALK2Q01415 458 aa18.94■□□□□ 0.62
CDCA4-201ENST00000336219 ZNF630Q2M218 657 aaPredicted RBP18.94■□□□□ 0.62
CDCA4-201ENST00000336219 ZNF805Q5CZA5 627 aa18.94■□□□□ 0.62
CDCA4-201ENST00000336219 FAM71E1Q6IPT2 247 aa18.94■□□□□ 0.62
CDCA4-201ENST00000336219 ZNF770Q6IQ21 691 aaPredicted RBP18.94■□□□□ 0.62
CDCA4-201ENST00000336219 LIPIQ6XZB0 460 aa18.94■□□□□ 0.62
CDCA4-201ENST00000336219 ANKRD33Q7Z3H0 272 aa18.94■□□□□ 0.62
CDCA4-201ENST00000336219 GLCCI1Q86VQ1 547 aa18.94■□□□□ 0.62
CDCA4-201ENST00000336219 KRT73Q86Y46 540 aa18.94■□□□□ 0.62
CDCA4-201ENST00000336219 UBASH3BQ8TF42 649 aa18.94■□□□□ 0.62
CDCA4-201ENST00000336219 WRAP53Q9BUR4 548 aaKnown RBP18.94■□□□□ 0.62
CDCA4-201ENST00000336219 POLR2J2Q9GZM3 115 aaKnown RBP18.94■□□□□ 0.62
CDCA4-201ENST00000336219 ZBP1Q9H171 429 aa18.94■□□□□ 0.62
CDCA4-201ENST00000336219 LINC00597Q9H2U6 94 aa18.94■□□□□ 0.62
CDCA4-201ENST00000336219 IL36AQ9UHA7 158 aa18.94■□□□□ 0.62
CDCA4-201ENST00000336219 YARS2Q9Y2Z4 477 aaKnown RBP18.94■□□□□ 0.62
CDCA4-201ENST00000336219 KIAA1549LQ6ZVL6 1849 aa18.94■□□□□ 0.62
CDCA4-201ENST00000336219 ELFN1P0C7U0 828 aa18.94■□□□□ 0.62
CDCA4-201ENST00000336219 POLR2EP19388 210 aaKnown RBP18.94■□□□□ 0.62
CDCA4-201ENST00000336219 PSMA1P25786 263 aaKnown RBP18.94■□□□□ 0.62
CDCA4-201ENST00000336219 MMP12P39900 470 aa18.94■□□□□ 0.62
CDCA4-201ENST00000336219 TAS2R50P59544 299 aa18.94■□□□□ 0.62
CDCA4-201ENST00000336219 MEF2AQ02078 507 aaPredicted RBP18.94■□□□□ 0.62
CDCA4-201ENST00000336219 LARS2Q15031 903 aaKnown RBP18.94■□□□□ 0.62
CDCA4-201ENST00000336219 TMIGD1Q6UXZ0 262 aa18.94■□□□□ 0.62
CDCA4-201ENST00000336219 CCDC149Q6ZUS6 474 aa18.94■□□□□ 0.62
CDCA4-201ENST00000336219 ABI3BPQ7Z7G0 1075 aa18.94■□□□□ 0.62
CDCA4-201ENST00000336219 SGPP1Q9BX95 441 aa18.94■□□□□ 0.62
CDCA4-201ENST00000336219 GPBP1L1Q9HC44 474 aaPredicted RBP18.94■□□□□ 0.62
CDCA4-201ENST00000336219 SPHK2Q9NRA0 654 aa18.94■□□□□ 0.62
CDCA4-201ENST00000336219 PDE4DIPQ5VU43 2346 aa18.94■□□□□ 0.62
CDCA4-201ENST00000336219 LTBP2Q14767 1821 aa18.93■□□□□ 0.62
CDCA4-201ENST00000336219 CCL16O15467 120 aa18.93■□□□□ 0.62
CDCA4-201ENST00000336219 SEMA7AO75326 666 aa18.93■□□□□ 0.62
CDCA4-201ENST00000336219 IFNA14P01570 189 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms