RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 ZNF41P51814 821 aaPredicted RBP5.31□□□□□ -1.56
PTPRB-202ENST00000334414 PRPS1P60891 318 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 PPIGQ13427 754 aaKnown RBP eCLIP5.31□□□□□ -1.56
PTPRB-202ENST00000334414 C19orf35Q6ZS72 473 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 KANSL1Q7Z3B3 1105 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 LIX1LQ8IVB5 337 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 KLHDC8BQ8IXV7 354 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 FAM156AQ8NDB6 213 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 ABHD11Q8NFV4 315 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 THAP4Q8WY91 577 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 GTF2H4Q92759 462 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 ACDQ96AP0 544 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 L3HYPDHQ96EM0 354 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 ZNF587Q96SQ5 575 aaPredicted RBP5.31□□□□□ -1.56
PTPRB-202ENST00000334414 CMKLR1Q99788 373 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 ARPC5LQ9BPX5 153 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 PITHD1Q9GZP4 211 aaPredicted RBP5.31□□□□□ -1.56
PTPRB-202ENST00000334414 FBXL4Q9UKA2 621 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 PCDHB14Q9Y5E9 798 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 UBFD1O14562 309 aaKnown RBP5.31□□□□□ -1.56
PTPRB-202ENST00000334414 PPP1R2P9O14990 202 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 TLX2O43763 284 aaPredicted RBP5.31□□□□□ -1.56
PTPRB-202ENST00000334414 EPOP01588 193 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 RAB40ALP0C0E4 278 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 BPIP17213 487 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 RPL35P42766 123 aaKnown RBP5.31□□□□□ -1.56
PTPRB-202ENST00000334414 RPS3AP61247 264 aaKnown RBP5.31□□□□□ -1.56
PTPRB-202ENST00000334414 CAP1Q01518 475 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 GPR19Q15760 415 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 WSCD1Q658N2 575 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 SLC51AQ86UW1 340 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 RAB40AQ8WXH6 277 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 BARD1Q99728 777 aaKnown RBP5.31□□□□□ -1.56
PTPRB-202ENST00000334414 CDC14AQ9UNH5 594 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 YDJCA8MPS7 323 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 SPATA31C2B4DYI2 1134 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 OR1F1O43749 312 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 SHMT1P34896 483 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 TAGLN2P37802 199 aaKnown RBP5.31□□□□□ -1.56
PTPRB-202ENST00000334414 CREB5Q02930 508 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 BAK1Q16611 211 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 SLC6A19Q695T7 634 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 BLOC1S3Q6QNY0 202 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 NLRP8Q86W28 1048 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 CILP2Q8IUL8 1156 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 SGPP2Q8IWX5 399 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 FIBCD1Q8N539 461 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 RNF141Q8WVD5 230 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 DHRS1Q96LJ7 313 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 CD244Q9BZW8 370 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 DNTTIP1Q9H147 329 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 ADAP2Q9NPF8 381 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 ZNF536O15090 1300 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 CNTNAP1P78357 1384 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 AKAP12Q02952 1782 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 A0A0U1RQJ8 604 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 NFYBP25208 207 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 BDKRB2P30411 391 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 EPHX2P34913 555 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 STC1P52823 247 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 IRF9Q00978 393 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 ENPP7Q6UWV6 458 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 ZNF783Q6ZMS7 281 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 GPR149Q86SP6 731 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 IQCHQ86VS3 1027 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 SLC35F3Q8IY50 421 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 CCDC120Q96HB5 630 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 OSMRQ99650 979 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 TBL1XR1Q9BZK7 514 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 OSBPL2Q9H1P3 480 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 TP63Q9H3D4 680 aaPredicted RBP5.31□□□□□ -1.56
PTPRB-202ENST00000334414 TSPAN3O60637 253 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 SRPX2O60687 465 aaPredicted RBP5.31□□□□□ -1.56
PTPRB-202ENST00000334414 SNNO75324 88 aaPredicted RBP5.31□□□□□ -1.56
PTPRB-202ENST00000334414 CTHP32929 405 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 MASP1P48740 699 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 BLKP51451 505 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 MFGE8Q08431 387 aaPredicted RBP5.31□□□□□ -1.56
PTPRB-202ENST00000334414 RAB30Q15771 203 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 PPP2R2DQ66LE6 453 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 NFKBIDQ8NI38 313 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 FUBP3Q96I24 572 aaKnown RBP eCLIP5.31□□□□□ -1.56
PTPRB-202ENST00000334414 LRCH3Q96II8 777 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 PCDHAC1Q9H158 963 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 OR51V1Q9H2C8 321 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 SLCO5A1Q9H2Y9 848 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 FBXW11Q9UKB1 542 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 ADAMTS6Q9UKP5 1117 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 MEIOCA2RUB1 952 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 TGFB1I1O43294 461 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 SH3BGRLO75368 114 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 DRD2P14416 443 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 MAGEA11P43364 429 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 TAS2R30P59541 319 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 CLEC12AQ5QGZ9 265 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 PLEKHS1Q5SXH7 462 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 HORMAD2Q8N7B1 307 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 PAPD5Q8NDF8 572 aaKnown RBP5.31□□□□□ -1.56
PTPRB-202ENST00000334414 OR5H2Q8NGV7 314 aa5.31□□□□□ -1.56
PTPRB-202ENST00000334414 OR56B4Q8NH76 319 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms