RNA–Protein interactions for RNA: ENST00000330852.9

RAB28-202, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAB28, Length 1,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-202ENST00000330852 WWP2O00308 870 aa16.79■□□□□ 0.28
RAB28-202ENST00000330852 ADAM10O14672 748 aa16.79■□□□□ 0.28
RAB28-202ENST00000330852 OR6B1O95007 311 aa16.79■□□□□ 0.28
RAB28-202ENST00000330852 BUD31P41223 144 aaPredicted RBP16.79■□□□□ 0.28
RAB28-202ENST00000330852 SOX3P41225 446 aa16.79■□□□□ 0.28
RAB28-202ENST00000330852 GPR85P60893 370 aa16.79■□□□□ 0.28
RAB28-202ENST00000330852 SLC7A5Q01650 507 aa16.79■□□□□ 0.28
RAB28-202ENST00000330852 TBL3Q12788 808 aaKnown RBP16.79■□□□□ 0.28
RAB28-202ENST00000330852 CUL3Q13618 768 aa16.79■□□□□ 0.28
RAB28-202ENST00000330852 NDUFAF5Q5TEU4 345 aa16.79■□□□□ 0.28
RAB28-202ENST00000330852 SRRM1Q8IYB3 904 aaKnown RBP16.79■□□□□ 0.28
RAB28-202ENST00000330852 OR2M7Q8NG81 312 aa16.79■□□□□ 0.28
RAB28-202ENST00000330852 ZNF721Q8TF20 911 aa16.79■□□□□ 0.28
RAB28-202ENST00000330852 LRRC1Q9BTT6 524 aa16.79■□□□□ 0.28
RAB28-202ENST00000330852 FUT8Q9BYC5 575 aa16.79■□□□□ 0.28
RAB28-202ENST00000330852 LYARQ9NX58 379 aaKnown RBP16.79■□□□□ 0.28
RAB28-202ENST00000330852 COQ3Q9NZJ6 369 aa16.79■□□□□ 0.28
RAB28-202ENST00000330852 ESYT3A0FGR9 886 aa16.79■□□□□ 0.28
RAB28-202ENST00000330852 CNR1P21554 472 aa16.79■□□□□ 0.28
RAB28-202ENST00000330852 IRF9Q00978 393 aa16.79■□□□□ 0.28
RAB28-202ENST00000330852 PLIN5Q00G26 463 aa16.79■□□□□ 0.28
RAB28-202ENST00000330852 TNFRSF17Q02223 184 aa16.79■□□□□ 0.28
RAB28-202ENST00000330852 DDX39BQ13838 428 aaKnown RBP16.79■□□□□ 0.28
RAB28-202ENST00000330852 GTF2H2Q13888 395 aa16.79■□□□□ 0.28
RAB28-202ENST00000330852 C10orf62Q5T681 223 aaPredicted RBP16.79■□□□□ 0.28
RAB28-202ENST00000330852 GTF2H2CQ6P1K8 395 aa16.79■□□□□ 0.28
RAB28-202ENST00000330852 C16orf47Q6ZP98 133 aaPredicted RBP16.79■□□□□ 0.28
RAB28-202ENST00000330852 SLC22A16Q86VW1 577 aa16.79■□□□□ 0.28
RAB28-202ENST00000330852 MYLK4Q86YV6 388 aaPredicted RBP16.79■□□□□ 0.28
RAB28-202ENST00000330852 SLC15A4Q8N697 577 aa16.79■□□□□ 0.28
RAB28-202ENST00000330852 L3MBTL4Q8NA19 623 aa16.79■□□□□ 0.28
RAB28-202ENST00000330852 SENP5Q96HI0 755 aaPredicted RBP16.79■□□□□ 0.28
RAB28-202ENST00000330852 GPR78Q96P69 363 aa16.79■□□□□ 0.28
RAB28-202ENST00000330852 FAM173AQ9BQD7 235 aa16.79■□□□□ 0.28
RAB28-202ENST00000330852 TP63Q9H3D4 680 aaPredicted RBP16.79■□□□□ 0.28
RAB28-202ENST00000330852 FOXE1O00358 373 aaPredicted RBP16.78■□□□□ 0.28
RAB28-202ENST00000330852 SAP18O00422 153 aaKnown RBP16.78■□□□□ 0.28
RAB28-202ENST00000330852 PLPP1O14494 284 aa16.78■□□□□ 0.28
RAB28-202ENST00000330852 FGF17O60258 216 aa16.78■□□□□ 0.28
RAB28-202ENST00000330852 ETHE1O95571 254 aa16.78■□□□□ 0.28
RAB28-202ENST00000330852 ALDOAP04075 364 aaKnown RBP16.78■□□□□ 0.28
RAB28-202ENST00000330852 TPOP07202 933 aa16.78■□□□□ 0.28
RAB28-202ENST00000330852 RFC3P40938 356 aa16.78■□□□□ 0.28
RAB28-202ENST00000330852 PLGLB1Q02325 96 aa16.78■□□□□ 0.28
RAB28-202ENST00000330852 UAP1Q16222 522 aaPredicted RBP16.78■□□□□ 0.28
RAB28-202ENST00000330852 WHAMMP3Q1A5X7 153 aa16.78■□□□□ 0.28
RAB28-202ENST00000330852 DND1Q8IYX4 353 aaKnown RBP16.78■□□□□ 0.28
RAB28-202ENST00000330852 ST13P4Q8IZP2 240 aaPredicted RBP16.78■□□□□ 0.28
RAB28-202ENST00000330852 FBXL20Q96IG2 436 aa16.78■□□□□ 0.28
RAB28-202ENST00000330852 MTERF1Q99551 399 aaKnown RBP16.78■□□□□ 0.28
RAB28-202ENST00000330852 DDX31Q9H8H2 851 aaKnown RBP16.78■□□□□ 0.28
RAB28-202ENST00000330852 IPPKQ9H8X2 491 aa16.78■□□□□ 0.28
RAB28-202ENST00000330852 ZDHHC11Q9H8X9 412 aa16.78■□□□□ 0.28
RAB28-202ENST00000330852 LIN28AQ9H9Z2 209 aaKnown RBP16.78■□□□□ 0.28
RAB28-202ENST00000330852 DEPPQ9NTK1 212 aa16.78■□□□□ 0.28
RAB28-202ENST00000330852 PROM1O43490 865 aa16.77■□□□□ 0.28
RAB28-202ENST00000330852 CDC40O60508 579 aaKnown RBP eCLIP16.77■□□□□ 0.28
RAB28-202ENST00000330852 SH3BGRLO75368 114 aa16.77■□□□□ 0.28
RAB28-202ENST00000330852 IGKV3-11P04433 115 aa16.77■□□□□ 0.28
RAB28-202ENST00000330852 RBP1P09455 135 aa16.77■□□□□ 0.28
RAB28-202ENST00000330852 GALNSP34059 522 aa16.77■□□□□ 0.28
RAB28-202ENST00000330852 PPIAP62937 165 aaKnown RBP16.77■□□□□ 0.28
RAB28-202ENST00000330852 PIGGQ5H8A4 983 aa16.77■□□□□ 0.28
RAB28-202ENST00000330852 TAOK1Q7L7X3 1001 aa16.77■□□□□ 0.28
RAB28-202ENST00000330852 SLC22A8Q8TCC7 542 aa16.77■□□□□ 0.28
RAB28-202ENST00000330852 MRRFQ96E11 262 aaKnown RBP16.77■□□□□ 0.28
RAB28-202ENST00000330852 SCYL1Q96KG9 808 aa16.77■□□□□ 0.28
RAB28-202ENST00000330852 SPOCK3Q9BQ16 436 aa16.77■□□□□ 0.28
RAB28-202ENST00000330852 WDR41Q9HAD4 459 aa16.77■□□□□ 0.28
RAB28-202ENST00000330852 IL1RL2Q9HB29 575 aa16.77■□□□□ 0.28
RAB28-202ENST00000330852 SACM1LQ9NTJ5 587 aa16.77■□□□□ 0.28
RAB28-202ENST00000330852 NINJ2Q9NZG7 142 aa16.77■□□□□ 0.28
RAB28-202ENST00000330852 MYOCOSA0A1B0GUC4 107 aa16.76■□□□□ 0.27
RAB28-202ENST00000330852 OR14I1A6ND48 311 aa16.76■□□□□ 0.27
RAB28-202ENST00000330852 GLSO94925 669 aaPredicted RBP16.76■□□□□ 0.27
RAB28-202ENST00000330852 CLDN9O95484 217 aa16.76■□□□□ 0.27
RAB28-202ENST00000330852 ALOX15P16050 662 aaPredicted RBP16.76■□□□□ 0.27
RAB28-202ENST00000330852 SERPINB9P50453 376 aa16.76■□□□□ 0.27
RAB28-202ENST00000330852 RPS13P62277 151 aaKnown RBP16.76■□□□□ 0.27
RAB28-202ENST00000330852 ID2Q02363 134 aa16.76■□□□□ 0.27
RAB28-202ENST00000330852 FOLH1Q04609 750 aa16.76■□□□□ 0.27
RAB28-202ENST00000330852 HYAL4Q2M3T9 481 aa16.76■□□□□ 0.27
RAB28-202ENST00000330852 TECRLQ5HYJ1 363 aa16.76■□□□□ 0.27
RAB28-202ENST00000330852 MRM1Q6IN84 353 aaKnown RBP16.76■□□□□ 0.27
RAB28-202ENST00000330852 GOLGA7Q7Z5G4 137 aa16.76■□□□□ 0.27
RAB28-202ENST00000330852 CD163Q86VB7 1156 aa16.76■□□□□ 0.27
RAB28-202ENST00000330852 ZNF321PQ8N8H1 164 aa16.76■□□□□ 0.27
RAB28-202ENST00000330852 OR52N2Q8NGI0 321 aa16.76■□□□□ 0.27
RAB28-202ENST00000330852 CA5BP1Q8WTZ4 195 aa16.76■□□□□ 0.27
RAB28-202ENST00000330852 ASB5Q8WWX0 329 aa16.76■□□□□ 0.27
RAB28-202ENST00000330852 ISL2Q96A47 359 aa16.76■□□□□ 0.27
RAB28-202ENST00000330852 ATG4BQ9Y4P1 393 aa16.76■□□□□ 0.27
RAB28-202ENST00000330852 SEMA3DO95025 777 aa16.76■□□□□ 0.27
RAB28-202ENST00000330852 GPR75O95800 540 aa16.76■□□□□ 0.27
RAB28-202ENST00000330852 P04436 131 aa16.76■□□□□ 0.27
RAB28-202ENST00000330852 INHBAP08476 426 aa16.76■□□□□ 0.27
RAB28-202ENST00000330852 COL6A2P12110 1019 aa16.76■□□□□ 0.27
RAB28-202ENST00000330852 CNTFP26441 200 aa16.76■□□□□ 0.27
RAB28-202ENST00000330852 BSGP35613 385 aa16.76■□□□□ 0.27
RAB28-202ENST00000330852 HNRNPH2P55795 449 aaKnown RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms