RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 SLC9B2Q86UD5 537 aa14.61□□□□□ -0.07
BRCC3-201ENST00000330045 HORMAD2Q8N7B1 307 aa14.61□□□□□ -0.07
BRCC3-201ENST00000330045 SETD7Q8WTS6 366 aaKnown RBP14.61□□□□□ -0.07
BRCC3-201ENST00000330045 SLC38A5Q8WUX1 472 aa14.61□□□□□ -0.07
BRCC3-201ENST00000330045 CEP19Q96LK0 163 aa14.61□□□□□ -0.07
BRCC3-201ENST00000330045 ZSWIM3Q96MP5 696 aa14.61□□□□□ -0.07
BRCC3-201ENST00000330045 TBC1D14Q9P2M4 693 aa14.61□□□□□ -0.07
BRCC3-201ENST00000330045 WNT6Q9Y6F9 365 aa14.61□□□□□ -0.07
BRCC3-201ENST00000330045 PRUNE2Q8WUY3 3088 aa14.61□□□□□ -0.07
BRCC3-201ENST00000330045 K7ESM1 405 aa14.61□□□□□ -0.07
BRCC3-201ENST00000330045 GSTT2P0CG29 244 aa14.61□□□□□ -0.07
BRCC3-201ENST00000330045 GSTT2BP0CG30 244 aa14.61□□□□□ -0.07
BRCC3-201ENST00000330045 PRAMEF14Q5SWL7 426 aa14.61□□□□□ -0.07
BRCC3-201ENST00000330045 PRAMEF13Q5VWM6 474 aa14.61□□□□□ -0.07
BRCC3-201ENST00000330045 ING5Q8WYH8 240 aa14.61□□□□□ -0.07
BRCC3-201ENST00000330045 NEURL3Q96EH8 262 aa14.61□□□□□ -0.07
BRCC3-201ENST00000330045 OPALINQ96PE5 141 aa14.61□□□□□ -0.07
BRCC3-201ENST00000330045 FZD3Q9NPG1 666 aa14.61□□□□□ -0.07
BRCC3-201ENST00000330045 CRNNQ9UBG3 495 aaPredicted RBP14.61□□□□□ -0.07
BRCC3-201ENST00000330045 REV1Q9UBZ9 1251 aa14.61□□□□□ -0.07
BRCC3-201ENST00000330045 MTCL1Q9Y4B5 1905 aaKnown RBP14.61□□□□□ -0.07
BRCC3-201ENST00000330045 A0A075B6Q4 140 aa14.6□□□□□ -0.07
BRCC3-201ENST00000330045 ANKDD1BA6NHY2 528 aa14.6□□□□□ -0.07
BRCC3-201ENST00000330045 APOA1P02647 267 aa14.6□□□□□ -0.07
BRCC3-201ENST00000330045 EIF2S1P05198 315 aaKnown RBP14.6□□□□□ -0.07
BRCC3-201ENST00000330045 SCG5P05408 212 aa14.6□□□□□ -0.07
BRCC3-201ENST00000330045 CA3P07451 260 aa14.6□□□□□ -0.07
BRCC3-201ENST00000330045 DDX6P26196 483 aaKnown RBP eCLIP14.6□□□□□ -0.07
BRCC3-201ENST00000330045 CSTF2P33240 577 aaKnown RBP eCLIP14.6□□□□□ -0.07
BRCC3-201ENST00000330045 FEN1P39748 380 aaKnown RBP14.6□□□□□ -0.07
BRCC3-201ENST00000330045 PCYT1AP49585 367 aa14.6□□□□□ -0.07
BRCC3-201ENST00000330045 DGKGP49619 791 aa14.6□□□□□ -0.07
BRCC3-201ENST00000330045 MANFP55145 182 aaKnown RBP14.6□□□□□ -0.07
BRCC3-201ENST00000330045 SNRPGP62308 76 aaKnown RBP14.6□□□□□ -0.07
BRCC3-201ENST00000330045 RHAGQ02094 409 aa14.6□□□□□ -0.07
BRCC3-201ENST00000330045 ILKQ13418 452 aa14.6□□□□□ -0.07
BRCC3-201ENST00000330045 LRIT3Q3SXY7 679 aa14.6□□□□□ -0.07
BRCC3-201ENST00000330045 SAXO2Q658L1 398 aa14.6□□□□□ -0.07
BRCC3-201ENST00000330045 FAM92BQ6ZTR7 304 aa14.6□□□□□ -0.07
BRCC3-201ENST00000330045 KRT78Q8N1N4 520 aa14.6□□□□□ -0.07
BRCC3-201ENST00000330045 C2orf73Q8N5S3 287 aaPredicted RBP14.6□□□□□ -0.07
BRCC3-201ENST00000330045 GPR32P1Q8NGA4 272 aa14.6□□□□□ -0.07
BRCC3-201ENST00000330045 TMEM19Q96HH6 336 aa14.6□□□□□ -0.07
BRCC3-201ENST00000330045 IL17FQ96PD4 163 aa14.6□□□□□ -0.07
BRCC3-201ENST00000330045 SLC30A2Q9BRI3 323 aa14.6□□□□□ -0.07
BRCC3-201ENST00000330045 CNPPD1Q9BV87 410 aa14.6□□□□□ -0.07
BRCC3-201ENST00000330045 HHATLQ9HCP6 504 aa14.6□□□□□ -0.07
BRCC3-201ENST00000330045 A4GALTQ9NPC4 353 aa14.6□□□□□ -0.07
BRCC3-201ENST00000330045 EXOSC4Q9NPD3 245 aaKnown RBP14.6□□□□□ -0.07
BRCC3-201ENST00000330045 AHSPQ9NZD4 102 aa14.6□□□□□ -0.07
BRCC3-201ENST00000330045 RBMX2Q9Y388 322 aaKnown RBP14.6□□□□□ -0.07
BRCC3-201ENST00000330045 PDZK1P1A8MUH7 402 aa14.6□□□□□ -0.07
BRCC3-201ENST00000330045 DYRK3O43781 588 aa14.6□□□□□ -0.07
BRCC3-201ENST00000330045 MFN2O95140 757 aa14.6□□□□□ -0.07
BRCC3-201ENST00000330045 SOX14O95416 240 aa14.6□□□□□ -0.07
BRCC3-201ENST00000330045 DDCP20711 480 aa14.6□□□□□ -0.07
BRCC3-201ENST00000330045 SEC23BQ15437 767 aa14.6□□□□□ -0.07
BRCC3-201ENST00000330045 DCST1Q5T197 706 aa14.6□□□□□ -0.07
BRCC3-201ENST00000330045 RAET1GQ6H3X3 334 aa14.6□□□□□ -0.07
BRCC3-201ENST00000330045 ADGRD2Q7Z7M1 963 aa14.6□□□□□ -0.07
BRCC3-201ENST00000330045 KLHL6Q8WZ60 621 aa14.6□□□□□ -0.07
BRCC3-201ENST00000330045 OR5P2Q8WZ92 322 aa14.6□□□□□ -0.07
BRCC3-201ENST00000330045 SDHCQ99643 169 aaPredicted RBP14.6□□□□□ -0.07
BRCC3-201ENST00000330045 SLAMF7Q9NQ25 335 aa14.6□□□□□ -0.07
BRCC3-201ENST00000330045 MGAT4BQ9UQ53 548 aa14.6□□□□□ -0.07
BRCC3-201ENST00000330045 IRAK3Q9Y616 596 aa14.6□□□□□ -0.07
BRCC3-201ENST00000330045 CCDC88CQ9P219 2028 aa14.6□□□□□ -0.07
BRCC3-201ENST00000330045 PLPP1O14494 284 aa14.59□□□□□ -0.07
BRCC3-201ENST00000330045 OR10H3O60404 316 aa14.59□□□□□ -0.07
BRCC3-201ENST00000330045 POP7O75817 140 aaKnown RBP14.59□□□□□ -0.07
BRCC3-201ENST00000330045 RHOP08100 348 aa14.59□□□□□ -0.07
BRCC3-201ENST00000330045 IGFBP1P08833 259 aaPredicted RBP14.59□□□□□ -0.07
BRCC3-201ENST00000330045 CKMT1AP12532 417 aa14.59□□□□□ -0.07
BRCC3-201ENST00000330045 CD72P21854 359 aa14.59□□□□□ -0.07
BRCC3-201ENST00000330045 ELAVL4P26378 380 aaKnown RBP14.59□□□□□ -0.07
BRCC3-201ENST00000330045 ACADLP28330 430 aa14.59□□□□□ -0.07
BRCC3-201ENST00000330045 TIE1P35590 1138 aa14.59□□□□□ -0.07
BRCC3-201ENST00000330045 CASP3P42574 277 aa14.59□□□□□ -0.07
BRCC3-201ENST00000330045 GPR1P46091 355 aa14.59□□□□□ -0.07
BRCC3-201ENST00000330045 METAP1P53582 386 aa14.59□□□□□ -0.07
BRCC3-201ENST00000330045 NFE2L1Q14494 772 aa14.59□□□□□ -0.07
BRCC3-201ENST00000330045 ZNF77Q15935 545 aa14.59□□□□□ -0.07
BRCC3-201ENST00000330045 ARHGAP15Q53QZ3 475 aa14.59□□□□□ -0.07
BRCC3-201ENST00000330045 TCTN3Q6NUS6 607 aa14.59□□□□□ -0.07
BRCC3-201ENST00000330045 FAM129CQ86XR2 697 aa14.59□□□□□ -0.07
BRCC3-201ENST00000330045 ZNF547Q8IVP9 402 aa14.59□□□□□ -0.07
BRCC3-201ENST00000330045 C12orf76Q8N812 135 aaPredicted RBP14.59□□□□□ -0.07
BRCC3-201ENST00000330045 CTRCQ99895 268 aa14.59□□□□□ -0.07
BRCC3-201ENST00000330045 CCDC32Q9BV29 185 aa14.59□□□□□ -0.07
BRCC3-201ENST00000330045 ACAT2Q9BWD1 397 aa14.59□□□□□ -0.07
BRCC3-201ENST00000330045 ASPNQ9BXN1 380 aa14.59□□□□□ -0.07
BRCC3-201ENST00000330045 ZDHHC5Q9C0B5 715 aa14.59□□□□□ -0.07
BRCC3-201ENST00000330045 DPEP2Q9H4A9 486 aa14.59□□□□□ -0.07
BRCC3-201ENST00000330045 ERVK13-1Q9NX77 482 aa14.59□□□□□ -0.07
BRCC3-201ENST00000330045 DNAJC27Q9NZQ0 273 aa14.59□□□□□ -0.07
BRCC3-201ENST00000330045 NDOR1Q9UHB4 597 aa14.59□□□□□ -0.07
BRCC3-201ENST00000330045 KIAA1549LQ6ZVL6 1849 aa14.59□□□□□ -0.07
BRCC3-201ENST00000330045 KIF26AQ9ULI4 1882 aaPredicted RBP14.59□□□□□ -0.07
BRCC3-201ENST00000330045 C17orf113A0A1B0GUU1 675 aa14.59□□□□□ -0.07
BRCC3-201ENST00000330045 A8MU76 341 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms