RNA–Protein interactions for RNA: ENST00000327154.10

RPAIN-201, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-201ENST00000327154 MTERF1Q99551 399 aaKnown RBP13.09□□□□□ -0.31
RPAIN-201ENST00000327154 TRIM8Q9BZR9 551 aa13.09□□□□□ -0.31
RPAIN-201ENST00000327154 TSPYL1Q9H0U9 437 aa13.09□□□□□ -0.31
RPAIN-201ENST00000327154 CDC42EP4Q9H3Q1 356 aaKnown RBP13.09□□□□□ -0.31
RPAIN-201ENST00000327154 RPF2Q9H7B2 306 aaKnown RBP13.09□□□□□ -0.31
RPAIN-201ENST00000327154 SNX15Q9NRS6 342 aa13.09□□□□□ -0.31
RPAIN-201ENST00000327154 ADGRE2Q9UHX3 823 aa13.09□□□□□ -0.31
RPAIN-201ENST00000327154 ABCA12Q86UK0 2595 aa13.09□□□□□ -0.31
RPAIN-201ENST00000327154 PCNX1Q96RV3 2341 aa13.08□□□□□ -0.31
RPAIN-201ENST00000327154 A0A096LPK6 155 aa13.08□□□□□ -0.32
RPAIN-201ENST00000327154 ZNF354AO60765 605 aaPredicted RBP13.08□□□□□ -0.32
RPAIN-201ENST00000327154 ACSL3O95573 720 aa13.08□□□□□ -0.32
RPAIN-201ENST00000327154 GFAPP14136 432 aa13.08□□□□□ -0.32
RPAIN-201ENST00000327154 CNR1P21554 472 aa13.08□□□□□ -0.32
RPAIN-201ENST00000327154 PHBP35232 272 aa13.08□□□□□ -0.32
RPAIN-201ENST00000327154 PIK3CBP42338 1070 aa13.08□□□□□ -0.32
RPAIN-201ENST00000327154 SETDB1Q15047 1291 aa13.08□□□□□ -0.32
RPAIN-201ENST00000327154 ACAP2Q15057 778 aa13.08□□□□□ -0.32
RPAIN-201ENST00000327154 UAP1Q16222 522 aaPredicted RBP13.08□□□□□ -0.32
RPAIN-201ENST00000327154 UBAP2Q5T6F2 1119 aaKnown RBP13.08□□□□□ -0.32
RPAIN-201ENST00000327154 LIPJQ5W064 366 aa13.08□□□□□ -0.32
RPAIN-201ENST00000327154 C18orf63Q68DL7 685 aa13.08□□□□□ -0.32
RPAIN-201ENST00000327154 ARHGAP11AQ6P4F7 1023 aa13.08□□□□□ -0.32
RPAIN-201ENST00000327154 RTL4Q6ZR62 310 aa13.08□□□□□ -0.32
RPAIN-201ENST00000327154 CCDC91Q7Z6B0 441 aa13.08□□□□□ -0.32
RPAIN-201ENST00000327154 GPR180Q86V85 440 aa13.08□□□□□ -0.32
RPAIN-201ENST00000327154 MARVELD2Q8N4S9 558 aa13.08□□□□□ -0.32
RPAIN-201ENST00000327154 DOK4Q8TEW6 326 aa13.08□□□□□ -0.32
RPAIN-201ENST00000327154 SCYL1Q96KG9 808 aa13.08□□□□□ -0.32
RPAIN-201ENST00000327154 DGAT2Q96PD7 388 aa13.08□□□□□ -0.32
RPAIN-201ENST00000327154 CENPKQ9BS16 269 aa13.08□□□□□ -0.32
RPAIN-201ENST00000327154 ACTR8Q9H981 624 aa13.08□□□□□ -0.32
RPAIN-201ENST00000327154 DMRT3Q9NQL9 472 aa13.08□□□□□ -0.32
RPAIN-201ENST00000327154 PLSCR2Q9NRY7 297 aa13.08□□□□□ -0.32
RPAIN-201ENST00000327154 MS4A12Q9NXJ0 267 aa13.08□□□□□ -0.32
RPAIN-201ENST00000327154 COQ3Q9NZJ6 369 aa13.08□□□□□ -0.32
RPAIN-201ENST00000327154 COPS7AQ9UBW8 275 aa13.08□□□□□ -0.32
RPAIN-201ENST00000327154 ATG4BQ9Y4P1 393 aa13.08□□□□□ -0.32
RPAIN-201ENST00000327154 PCDHGA11Q9Y5H2 935 aa13.08□□□□□ -0.32
RPAIN-201ENST00000327154 APCP25054 2843 aa13.08□□□□□ -0.32
RPAIN-201ENST00000327154 WASHC1A8K0Z3 465 aa13.07□□□□□ -0.32
RPAIN-201ENST00000327154 HRKO00198 91 aa13.07□□□□□ -0.32
RPAIN-201ENST00000327154 PLPP1O14494 284 aa13.07□□□□□ -0.32
RPAIN-201ENST00000327154 PROM1O43490 865 aa13.07□□□□□ -0.32
RPAIN-201ENST00000327154 PRKRAO75569 313 aaKnown RBP13.07□□□□□ -0.32
RPAIN-201ENST00000327154 KLHL2O95198 593 aa13.07□□□□□ -0.32
RPAIN-201ENST00000327154 COX7A2P14406 83 aa13.07□□□□□ -0.32
RPAIN-201ENST00000327154 PTX3P26022 381 aaPredicted RBP13.07□□□□□ -0.32
RPAIN-201ENST00000327154 ELAVL4P26378 380 aaKnown RBP13.07□□□□□ -0.32
RPAIN-201ENST00000327154 TYK2P29597 1187 aa13.07□□□□□ -0.32
RPAIN-201ENST00000327154 TLX1P31314 330 aaPredicted RBP13.07□□□□□ -0.32
RPAIN-201ENST00000327154 DEKP35659 375 aaKnown RBP13.07□□□□□ -0.32
RPAIN-201ENST00000327154 STT3AP46977 705 aa13.07□□□□□ -0.32
RPAIN-201ENST00000327154 NEK2P51955 445 aa13.07□□□□□ -0.32
RPAIN-201ENST00000327154 ALDH18A1P54886 795 aaKnown RBP13.07□□□□□ -0.32
RPAIN-201ENST00000327154 RPS13P62277 151 aaKnown RBP13.07□□□□□ -0.32
RPAIN-201ENST00000327154 IGLV3-21P80748 117 aaPredicted RBP13.07□□□□□ -0.32
RPAIN-201ENST00000327154 FOLH1Q04609 750 aa13.07□□□□□ -0.32
RPAIN-201ENST00000327154 ASPHQ12797 758 aa13.07□□□□□ -0.32
RPAIN-201ENST00000327154 CPSF6Q16630 551 aaKnown RBP eCLIP13.07□□□□□ -0.32
RPAIN-201ENST00000327154 PIGGQ5H8A4 983 aa13.07□□□□□ -0.32
RPAIN-201ENST00000327154 PAOXQ6QHF9 649 aa13.07□□□□□ -0.32
RPAIN-201ENST00000327154 OPN5Q6U736 354 aa13.07□□□□□ -0.32
RPAIN-201ENST00000327154 DGAT2L6Q6ZPD8 337 aa13.07□□□□□ -0.32
RPAIN-201ENST00000327154 RGS9BPQ6ZS82 235 aa13.07□□□□□ -0.32
RPAIN-201ENST00000327154 GSPT2Q8IYD1 628 aaKnown RBP13.07□□□□□ -0.32
RPAIN-201ENST00000327154 ZCCHC7Q8N3Z6 543 aaKnown RBP13.07□□□□□ -0.32
RPAIN-201ENST00000327154 C7orf57Q8NEG2 295 aa13.07□□□□□ -0.32
RPAIN-201ENST00000327154 TANKQ92844 425 aa13.07□□□□□ -0.32
RPAIN-201ENST00000327154 SGCZQ96LD1 299 aa13.07□□□□□ -0.32
RPAIN-201ENST00000327154 LURAP1Q96LR2 239 aa13.07□□□□□ -0.32
RPAIN-201ENST00000327154 GPR78Q96P69 363 aa13.07□□□□□ -0.32
RPAIN-201ENST00000327154 FAM173AQ9BQD7 235 aa13.07□□□□□ -0.32
RPAIN-201ENST00000327154 TTTY12Q9BZ98 90 aa13.07□□□□□ -0.32
RPAIN-201ENST00000327154 IPPKQ9H8X2 491 aa13.07□□□□□ -0.32
RPAIN-201ENST00000327154 TSC22D4Q9Y3Q8 395 aa13.07□□□□□ -0.32
RPAIN-201ENST00000327154 FBN2P35556 2912 aa13.06□□□□□ -0.32
RPAIN-201ENST00000327154 CSMD1Q96PZ7 3565 aa13.06□□□□□ -0.32
RPAIN-201ENST00000327154 CCDC189A1A4V9 331 aa13.06□□□□□ -0.32
RPAIN-201ENST00000327154 NPIPA2E9PIF3 369 aa13.06□□□□□ -0.32
RPAIN-201ENST00000327154 NPIPA3F8WFD2 350 aa13.06□□□□□ -0.32
RPAIN-201ENST00000327154 ACOT7O00154 380 aa13.06□□□□□ -0.32
RPAIN-201ENST00000327154 DYRK3O43781 588 aa13.06□□□□□ -0.32
RPAIN-201ENST00000327154 KLK8O60259 260 aa13.06□□□□□ -0.32
RPAIN-201ENST00000327154 EEDO75530 441 aaKnown RBP13.06□□□□□ -0.32
RPAIN-201ENST00000327154 GLSO94925 669 aaPredicted RBP13.06□□□□□ -0.32
RPAIN-201ENST00000327154 SIX3O95343 332 aaPredicted RBP13.06□□□□□ -0.32
RPAIN-201ENST00000327154 P04436 131 aa13.06□□□□□ -0.32
RPAIN-201ENST00000327154 HNRNPH2P55795 449 aaKnown RBP13.06□□□□□ -0.32
RPAIN-201ENST00000327154 BIKQ13323 160 aa13.06□□□□□ -0.32
RPAIN-201ENST00000327154 GTF2H2Q13888 395 aa13.06□□□□□ -0.32
RPAIN-201ENST00000327154 PCBP2Q15366 365 aaKnown RBP eCLIP13.06□□□□□ -0.32
RPAIN-201ENST00000327154 MPEG1Q2M385 716 aa13.06□□□□□ -0.32
RPAIN-201ENST00000327154 GXYLT1Q4G148 440 aa13.06□□□□□ -0.32
RPAIN-201ENST00000327154 EMC4Q5J8M3 183 aa13.06□□□□□ -0.32
RPAIN-201ENST00000327154 NDUFAF5Q5TEU4 345 aa13.06□□□□□ -0.32
RPAIN-201ENST00000327154 TMEM211Q6ICI0 200 aa13.06□□□□□ -0.32
RPAIN-201ENST00000327154 GTF2H2CQ6P1K8 395 aa13.06□□□□□ -0.32
RPAIN-201ENST00000327154 KLC3Q6P597 504 aa13.06□□□□□ -0.32
RPAIN-201ENST00000327154 GK5Q6ZS86 529 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms