RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 RHCEP18577 417 aa12.28□□□□□ -0.44
HMGCS1-201ENST00000325110 PNLIPRP1P54315 467 aa12.28□□□□□ -0.44
HMGCS1-201ENST00000325110 CRB2Q5IJ48 1285 aa12.28□□□□□ -0.44
HMGCS1-201ENST00000325110 PLAG1Q6DJT9 500 aa12.28□□□□□ -0.44
HMGCS1-201ENST00000325110 ZNF367Q7RTV3 350 aa12.28□□□□□ -0.44
HMGCS1-201ENST00000325110 C6orf120Q7Z4R8 191 aa12.28□□□□□ -0.44
HMGCS1-201ENST00000325110 IQCHQ86VS3 1027 aa12.28□□□□□ -0.44
HMGCS1-201ENST00000325110 ZNF513Q8N8E2 541 aaPredicted RBP12.28□□□□□ -0.44
HMGCS1-201ENST00000325110 C7orf57Q8NEG2 295 aa12.28□□□□□ -0.44
HMGCS1-201ENST00000325110 OR56A3Q8NH54 315 aa12.28□□□□□ -0.44
HMGCS1-201ENST00000325110 TFGQ92734 400 aaPredicted RBP12.28□□□□□ -0.44
HMGCS1-201ENST00000325110 NUS1Q96E22 293 aa12.28□□□□□ -0.44
HMGCS1-201ENST00000325110 C1GALT1Q9NS00 363 aa12.28□□□□□ -0.44
HMGCS1-201ENST00000325110 CUEDC1Q9NWM3 386 aaPredicted RBP12.28□□□□□ -0.44
HMGCS1-201ENST00000325110 EXO1Q9UQ84 846 aaKnown RBP12.28□□□□□ -0.44
HMGCS1-201ENST00000325110 GBF1Q92538 1859 aa12.27□□□□□ -0.44
HMGCS1-201ENST00000325110 HAT1O14929 419 aa12.27□□□□□ -0.44
HMGCS1-201ENST00000325110 PI15O43692 258 aa12.27□□□□□ -0.44
HMGCS1-201ENST00000325110 PRKRAO75569 313 aaKnown RBP12.27□□□□□ -0.44
HMGCS1-201ENST00000325110 GPX5O75715 221 aa12.27□□□□□ -0.44
HMGCS1-201ENST00000325110 SYN1P17600 705 aa12.27□□□□□ -0.44
HMGCS1-201ENST00000325110 PTX3P26022 381 aaPredicted RBP12.27□□□□□ -0.44
HMGCS1-201ENST00000325110 PRLHRP49683 370 aa12.27□□□□□ -0.44
HMGCS1-201ENST00000325110 SLC16A1P53985 500 aa12.27□□□□□ -0.44
HMGCS1-201ENST00000325110 KCNC4Q03721 635 aa12.27□□□□□ -0.44
HMGCS1-201ENST00000325110 RBBP4Q09028 425 aa12.27□□□□□ -0.44
HMGCS1-201ENST00000325110 HNRNPA0Q13151 305 aaKnown RBP12.27□□□□□ -0.44
HMGCS1-201ENST00000325110 HEPACAMQ14CZ8 416 aa12.27□□□□□ -0.44
HMGCS1-201ENST00000325110 SYPL1Q16563 259 aa12.27□□□□□ -0.44
HMGCS1-201ENST00000325110 ATAT1Q5SQI0 421 aa12.27□□□□□ -0.44
HMGCS1-201ENST00000325110 MMAAQ8IVH4 418 aaKnown RBP12.27□□□□□ -0.44
HMGCS1-201ENST00000325110 SLC43A3Q8NBI5 491 aa12.27□□□□□ -0.44
HMGCS1-201ENST00000325110 SLC38A5Q8WUX1 472 aa12.27□□□□□ -0.44
HMGCS1-201ENST00000325110 DACT3Q96B18 629 aaPredicted RBP12.27□□□□□ -0.44
HMGCS1-201ENST00000325110 COQ8BQ96D53 544 aa12.27□□□□□ -0.44
HMGCS1-201ENST00000325110 NEDD4LQ96PU5 975 aa12.27□□□□□ -0.44
HMGCS1-201ENST00000325110 C17orf62Q9BQA9 187 aa12.27□□□□□ -0.44
HMGCS1-201ENST00000325110 MMP28Q9H239 520 aa12.27□□□□□ -0.44
HMGCS1-201ENST00000325110 TP63Q9H3D4 680 aaPredicted RBP12.27□□□□□ -0.44
HMGCS1-201ENST00000325110 CAPN10Q9HC96 672 aa12.27□□□□□ -0.44
HMGCS1-201ENST00000325110 SLC35F4A4IF30 521 aa12.27□□□□□ -0.45
HMGCS1-201ENST00000325110 AP3D1O14617 1153 aa12.27□□□□□ -0.45
HMGCS1-201ENST00000325110 RFX3P48380 749 aa12.27□□□□□ -0.45
HMGCS1-201ENST00000325110 CAV3P56539 151 aa12.27□□□□□ -0.45
HMGCS1-201ENST00000325110 LASP1Q14847 261 aaKnown RBP12.27□□□□□ -0.45
HMGCS1-201ENST00000325110 MPEG1Q2M385 716 aa12.27□□□□□ -0.45
HMGCS1-201ENST00000325110 ZFP69Q49AA0 526 aa12.27□□□□□ -0.45
HMGCS1-201ENST00000325110 CRTC2Q53ET0 693 aaPredicted RBP12.27□□□□□ -0.45
HMGCS1-201ENST00000325110 TCEAL5Q5H9L2 206 aa12.27□□□□□ -0.45
HMGCS1-201ENST00000325110 RNF165Q6ZSG1 346 aa12.27□□□□□ -0.45
HMGCS1-201ENST00000325110 GRASPQ7Z6J2 395 aaPredicted RBP12.27□□□□□ -0.45
HMGCS1-201ENST00000325110 ADIPOR2Q86V24 386 aa12.27□□□□□ -0.45
HMGCS1-201ENST00000325110 C9orf43Q8TAL5 461 aaPredicted RBP12.27□□□□□ -0.45
HMGCS1-201ENST00000325110 RAD51AP1Q96B01 352 aa12.27□□□□□ -0.45
HMGCS1-201ENST00000325110 ZNF607Q96SK3 696 aa12.27□□□□□ -0.45
HMGCS1-201ENST00000325110 TTYH2Q9BSA4 534 aa12.27□□□□□ -0.45
HMGCS1-201ENST00000325110 QRSL1Q9H0R6 528 aaKnown RBP12.27□□□□□ -0.45
HMGCS1-201ENST00000325110 ATG2BQ96BY7 2078 aa12.27□□□□□ -0.45
HMGCS1-201ENST00000325110 SLC5A10A0PJK1 596 aa12.27□□□□□ -0.45
HMGCS1-201ENST00000325110 PPM1DO15297 605 aa12.27□□□□□ -0.45
HMGCS1-201ENST00000325110 LRRTM2O43300 516 aa12.27□□□□□ -0.45
HMGCS1-201ENST00000325110 CCT3P49368 545 aaKnown RBP12.27□□□□□ -0.45
HMGCS1-201ENST00000325110 RNF144AP50876 292 aaPredicted RBP12.27□□□□□ -0.45
HMGCS1-201ENST00000325110 ZNF517Q6ZMY9 492 aaPredicted RBP12.27□□□□□ -0.45
HMGCS1-201ENST00000325110 DTX3Q8N9I9 347 aa12.27□□□□□ -0.45
HMGCS1-201ENST00000325110 UBE2E3Q969T4 207 aa12.27□□□□□ -0.45
HMGCS1-201ENST00000325110 SPATA9Q9BWV2 254 aa12.27□□□□□ -0.45
HMGCS1-201ENST00000325110 SP140LQ9H930 580 aa12.27□□□□□ -0.45
HMGCS1-201ENST00000325110 TBC1D17Q9HA65 648 aa12.27□□□□□ -0.45
HMGCS1-201ENST00000325110 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.27□□□□□ -0.452e-7■■■■■ 30.7
HMGCS1-201ENST00000325110 FBXW2Q9UKT8 454 aa12.27□□□□□ -0.45
HMGCS1-201ENST00000325110 MKLN1Q9UL63 735 aa12.27□□□□□ -0.45
HMGCS1-201ENST00000325110 DYRK3O43781 588 aa12.26□□□□□ -0.45
HMGCS1-201ENST00000325110 OLFM2O95897 454 aa12.26□□□□□ -0.45
HMGCS1-201ENST00000325110 ARAFP10398 606 aa12.26□□□□□ -0.45
HMGCS1-201ENST00000325110 RPS19P39019 145 aaKnown RBP12.26□□□□□ -0.45
HMGCS1-201ENST00000325110 CASP3P42574 277 aa12.26□□□□□ -0.45
HMGCS1-201ENST00000325110 LIM2P55344 173 aa12.26□□□□□ -0.45
HMGCS1-201ENST00000325110 GINS1Q14691 196 aa12.26□□□□□ -0.45
HMGCS1-201ENST00000325110 NANOGNBQ7Z5D8 188 aa12.26□□□□□ -0.45
HMGCS1-201ENST00000325110 DOK4Q8TEW6 326 aa12.26□□□□□ -0.45
HMGCS1-201ENST00000325110 SLC9A6Q92581 669 aa12.26□□□□□ -0.45
HMGCS1-201ENST00000325110 LRR1Q96L50 414 aa12.26□□□□□ -0.45
HMGCS1-201ENST00000325110 TAAR2Q9P1P5 351 aa12.26□□□□□ -0.45
HMGCS1-201ENST00000325110 YARS2Q9Y2Z4 477 aaKnown RBP12.26□□□□□ -0.45
HMGCS1-201ENST00000325110 C5orf42Q9H799 3197 aa12.26□□□□□ -0.45
HMGCS1-201ENST00000325110 CENPXA8MT69 81 aa12.26□□□□□ -0.45
HMGCS1-201ENST00000325110 KMOO15229 486 aa12.26□□□□□ -0.45
HMGCS1-201ENST00000325110 SLITRK5O94991 958 aa12.26□□□□□ -0.45
HMGCS1-201ENST00000325110 PTTG1O95997 202 aa12.26□□□□□ -0.45
HMGCS1-201ENST00000325110 RHOP08100 348 aa12.26□□□□□ -0.45
HMGCS1-201ENST00000325110 CLEC2LP0C7M8 214 aa12.26□□□□□ -0.45
HMGCS1-201ENST00000325110 XCR1P46094 333 aa12.26□□□□□ -0.45
HMGCS1-201ENST00000325110 RAB25P57735 213 aa12.26□□□□□ -0.45
HMGCS1-201ENST00000325110 MAP4K2Q12851 820 aa12.26□□□□□ -0.45
HMGCS1-201ENST00000325110 OR2G6Q5TZ20 316 aa12.26□□□□□ -0.45
HMGCS1-201ENST00000325110 NEK10Q6ZWH5 1172 aa12.26□□□□□ -0.45
HMGCS1-201ENST00000325110 RAB43Q86YS6 212 aa12.26□□□□□ -0.45
HMGCS1-201ENST00000325110 SLAIN1Q8ND83 568 aa12.26□□□□□ -0.45
HMGCS1-201ENST00000325110 VN1R2Q8NFZ6 395 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms