RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-223	ENST00000324771	DENR	O43583	198 aa	Known RBP	11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	PRMT3	O60678	531 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	CLPX	O76031	633 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	CD160	O95971	181 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	C8B	P07358	591 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	CTSL	P07711	333 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	THEGL	P0DJG4	465 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	PFKL	P17858	780 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	CA5A	P35218	305 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	GINS1	Q14691	196 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	GPNMB	Q14956	572 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	TST	Q16762	297 aa	Known RBP	11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	NDUFA9	Q16795	377 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	TMEM151A	Q8N4L1	468 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	ENKUR	Q8TC29	256 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	RAB2B	Q8WUD1	216 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	ISOC1	Q96CN7	298 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	SLC25A36	Q96CQ1	311 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	ARSG	Q96EG1	525 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	PHOX2B	Q99453	314 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	LGR4	Q9BXB1	951 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	QRSL1	Q9H0R6	528 aa	Known RBP	11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	AGPAT4	Q9NRZ5	378 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	TRNAU1AP	Q9NX07	287 aa	Known RBP	11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	ANKMY1	Q9P2S6	941 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	CLCA3P	Q9Y6N3	262 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	MAU2	Q9Y6X3	613 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	PRAMEF33	A0A0G2JMD5	474 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	ANTXRL	A6NF34	631 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771		J3KTA2	159 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	SEMA4F	O95754	770 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	PFN3	P60673	137 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	SHC2	P98077	582 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	ZNF77	Q15935	545 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	ZSWIM7	Q19AV6	140 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	ZNF750	Q32MQ0	723 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771		Q6ZSR6	202 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	SHF	Q7M4L6	423 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	FGD2	Q7Z6J4	655 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	ASPG	Q86U10	573 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	LAPTM4B	Q86VI4	370 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	OR4K14	Q8NGD5	310 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	RASSF5	Q8WWW0	418 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	COQ7	Q99807	217 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	TMEM168	Q9H0V1	697 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	CLMP	Q9H6B4	373 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	APOBEC3B	Q9UH17	382 aa	Known RBP	11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	MAFF	Q9ULX9	164 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	GPR52	Q9Y2T5	361 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	PCDHGB5	Q9Y5G0	923 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	PCDHA9	Q9Y5H5	950 aa		11.28	□□□□□ -0.6
DDR1-223	ENST00000324771	DOCK6	Q96HP0	2047 aa		11.27	□□□□□ -0.6
DDR1-223	ENST00000324771	CEP350	Q5VT06	3117 aa		11.27	□□□□□ -0.6
DDR1-223	ENST00000324771	KIAA0355	O15063	1070 aa		11.27	□□□□□ -0.6
DDR1-223	ENST00000324771	LDB3	O75112	727 aa		11.27	□□□□□ -0.6
DDR1-223	ENST00000324771	PABPC4L	P0CB38	370 aa	Known RBP	11.27	□□□□□ -0.6
DDR1-223	ENST00000324771	UQCRC2	P22695	453 aa		11.27	□□□□□ -0.6
DDR1-223	ENST00000324771	SHMT2	P34897	504 aa		11.27	□□□□□ -0.6
DDR1-223	ENST00000324771	GABRA3	P34903	492 aa		11.27	□□□□□ -0.6
DDR1-223	ENST00000324771	GUCA1A	P43080	201 aa	Predicted RBP	11.27	□□□□□ -0.6
DDR1-223	ENST00000324771	CLCN2	P51788	898 aa		11.27	□□□□□ -0.6
DDR1-223	ENST00000324771	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	11.27	□□□□□ -0.6
DDR1-223	ENST00000324771	UGT8	Q16880	541 aa		11.27	□□□□□ -0.6
DDR1-223	ENST00000324771	C5orf22	Q49AR2	442 aa		11.27	□□□□□ -0.6
DDR1-223	ENST00000324771	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	11.27	□□□□□ -0.6
DDR1-223	ENST00000324771	OR52E8	Q6IFG1	317 aa		11.27	□□□□□ -0.6
DDR1-223	ENST00000324771	ZNF773	Q6PK81	442 aa		11.27	□□□□□ -0.6
DDR1-223	ENST00000324771	FAM217A	Q8IXS0	508 aa		11.27	□□□□□ -0.6
DDR1-223	ENST00000324771	ZFP41	Q8N8Y5	198 aa		11.27	□□□□□ -0.6
DDR1-223	ENST00000324771	TMEM102	Q8N9M5	508 aa	Predicted RBP	11.27	□□□□□ -0.6
DDR1-223	ENST00000324771	IPCEF1	Q8WWN9	437 aa	Predicted RBP	11.27	□□□□□ -0.6
DDR1-223	ENST00000324771	OR5P2	Q8WZ92	322 aa		11.27	□□□□□ -0.6
DDR1-223	ENST00000324771	BORCS5	Q969J3	196 aa		11.27	□□□□□ -0.6
DDR1-223	ENST00000324771	PPP1R14B	Q96C90	147 aa		11.27	□□□□□ -0.6
DDR1-223	ENST00000324771	ASB16	Q96NS5	453 aa		11.27	□□□□□ -0.6
DDR1-223	ENST00000324771	BARD1	Q99728	777 aa	Known RBP	11.27	□□□□□ -0.6
DDR1-223	ENST00000324771	DCSTAMP	Q9H295	470 aa		11.27	□□□□□ -0.6
DDR1-223	ENST00000324771	ARMC1	Q9NVT9	282 aa		11.27	□□□□□ -0.6
DDR1-223	ENST00000324771	COMMD3	Q9UBI1	195 aa		11.27	□□□□□ -0.6
DDR1-223	ENST00000324771	LINC01565	O15544	149 aa		11.27	□□□□□ -0.61
DDR1-223	ENST00000324771	PCDHGA12	O60330	932 aa		11.27	□□□□□ -0.61
DDR1-223	ENST00000324771	FZD6	O60353	706 aa		11.27	□□□□□ -0.61
DDR1-223	ENST00000324771	ABCB7	O75027	752 aa		11.27	□□□□□ -0.61
DDR1-223	ENST00000324771	RPL6	Q02878	288 aa	Known RBP	11.27	□□□□□ -0.61
DDR1-223	ENST00000324771	COQ5	Q5HYK3	327 aa		11.27	□□□□□ -0.61
DDR1-223	ENST00000324771	TMEM215	Q68D42	235 aa		11.27	□□□□□ -0.61
DDR1-223	ENST00000324771	OR4C11	Q6IEV9	310 aa		11.27	□□□□□ -0.61
DDR1-223	ENST00000324771	KRT74	Q7RTS7	529 aa		11.27	□□□□□ -0.61
DDR1-223	ENST00000324771	DTX3	Q8N9I9	347 aa		11.27	□□□□□ -0.61
DDR1-223	ENST00000324771	VN1R2	Q8NFZ6	395 aa		11.27	□□□□□ -0.61
DDR1-223	ENST00000324771	DIRAS2	Q96HU8	199 aa		11.27	□□□□□ -0.61
DDR1-223	ENST00000324771	SLC35C2	Q9NQQ7	365 aa		11.27	□□□□□ -0.61
DDR1-223	ENST00000324771	SAGE1	Q9NXZ1	904 aa		11.27	□□□□□ -0.61
DDR1-223	ENST00000324771	NKIRAS2	Q9NYR9	191 aa		11.27	□□□□□ -0.61
DDR1-223	ENST00000324771	ST14	Q9Y5Y6	855 aa		11.27	□□□□□ -0.61
DDR1-223	ENST00000324771	PRR23D1	E9PI22	279 aa	Predicted RBP	11.27	□□□□□ -0.61
DDR1-223	ENST00000324771	PRR23D2	P0DMB1	279 aa	Predicted RBP	11.27	□□□□□ -0.61
DDR1-223	ENST00000324771	ACADL	P28330	430 aa		11.27	□□□□□ -0.61
DDR1-223	ENST00000324771	MC3R	P41968	323 aa		11.27	□□□□□ -0.61

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