RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 GPR32P1Q8NGA4 272 aa16.56■□□□□ 0.24
COL9A1-201ENST00000320755 KLK6Q92876 244 aa16.56■□□□□ 0.24
COL9A1-201ENST00000320755 XKR8Q9H6D3 395 aa16.56■□□□□ 0.24
COL9A1-201ENST00000320755 AGAP5A6NIR3 686 aa16.55■□□□□ 0.24
COL9A1-201ENST00000320755 HEPACAM2A8MVW5 462 aa16.55■□□□□ 0.24
COL9A1-201ENST00000320755 SLC28A2O43868 658 aa16.55■□□□□ 0.24
COL9A1-201ENST00000320755 EFCAB14O75071 495 aa16.55■□□□□ 0.24
COL9A1-201ENST00000320755 SEMA7AO75326 666 aa16.55■□□□□ 0.24
COL9A1-201ENST00000320755 CHRM5P08912 532 aaPredicted RBP16.55■□□□□ 0.24
COL9A1-201ENST00000320755 STEAP3Q658P3 488 aa16.55■□□□□ 0.24
COL9A1-201ENST00000320755 MEX3DQ86XN8 651 aaKnown RBP16.55■□□□□ 0.24
COL9A1-201ENST00000320755 CYP4Z2PQ8N1L4 340 aa16.55■□□□□ 0.24
COL9A1-201ENST00000320755 SPPL3Q8TCT6 385 aa16.55■□□□□ 0.24
COL9A1-201ENST00000320755 ZNF514Q96K75 400 aaPredicted RBP16.55■□□□□ 0.24
COL9A1-201ENST00000320755 DPEP2Q9H4A9 486 aa16.55■□□□□ 0.24
COL9A1-201ENST00000320755 KCNK12Q9HB15 430 aa16.55■□□□□ 0.24
COL9A1-201ENST00000320755 ANHXE9PGG2 379 aa16.55■□□□□ 0.24
COL9A1-201ENST00000320755 KIAA0513O60268 411 aa16.55■□□□□ 0.24
COL9A1-201ENST00000320755 B4GALT2O60909 372 aa16.55■□□□□ 0.24
COL9A1-201ENST00000320755 PCDH8O95206 1070 aa16.55■□□□□ 0.24
COL9A1-201ENST00000320755 SERPINB1P30740 379 aa16.55■□□□□ 0.24
COL9A1-201ENST00000320755 TMED10P49755 219 aaKnown RBP16.55■□□□□ 0.24
COL9A1-201ENST00000320755 CLCNKAP51800 687 aa16.55■□□□□ 0.24
COL9A1-201ENST00000320755 PIN1Q13526 163 aaPredicted RBP16.55■□□□□ 0.24
COL9A1-201ENST00000320755 SYPL1Q16563 259 aa16.55■□□□□ 0.24
COL9A1-201ENST00000320755 SETD7Q8WTS6 366 aaKnown RBP16.55■□□□□ 0.24
COL9A1-201ENST00000320755 MTERF3Q96E29 417 aa16.55■□□□□ 0.24
COL9A1-201ENST00000320755 PDXPQ96GD0 296 aa16.55■□□□□ 0.24
COL9A1-201ENST00000320755 FAM210AQ96ND0 272 aa16.55■□□□□ 0.24
COL9A1-201ENST00000320755 AIF1LQ9BQI0 150 aa16.55■□□□□ 0.24
COL9A1-201ENST00000320755 FKBP14Q9NWM8 211 aa16.55■□□□□ 0.24
COL9A1-201ENST00000320755 SCHIP1Q9P0W5 487 aaPredicted RBP16.55■□□□□ 0.24
COL9A1-201ENST00000320755 CLEC2DQ9UHP7 191 aa16.55■□□□□ 0.24
COL9A1-201ENST00000320755 IGLON5A6NGN9 336 aa16.54■□□□□ 0.24
COL9A1-201ENST00000320755 TMPRSS11DO60235 418 aa16.54■□□□□ 0.24
COL9A1-201ENST00000320755 EPHX1P07099 455 aa16.54■□□□□ 0.24
COL9A1-201ENST00000320755 OR12D1P0DN82 309 aa16.54■□□□□ 0.24
COL9A1-201ENST00000320755 GPC1P35052 558 aa16.54■□□□□ 0.24
COL9A1-201ENST00000320755 UTS2BQ765I0 119 aa16.54■□□□□ 0.24
COL9A1-201ENST00000320755 LSRQ86X29 649 aaPredicted RBP16.54■□□□□ 0.24
COL9A1-201ENST00000320755 SLC34A3Q8N130 599 aa16.54■□□□□ 0.24
COL9A1-201ENST00000320755 IQCF1Q8N6M8 205 aa16.54■□□□□ 0.24
COL9A1-201ENST00000320755 SEMA3GQ9NS98 782 aa16.54■□□□□ 0.24
COL9A1-201ENST00000320755 SEC14L3Q9UDX4 400 aa16.54■□□□□ 0.24
COL9A1-201ENST00000320755 OR1A2Q9Y585 309 aa16.54■□□□□ 0.24
COL9A1-201ENST00000320755 AP1M2Q9Y6Q5 423 aa16.54■□□□□ 0.24
COL9A1-201ENST00000320755 HEATR5BQ9P2D3 2071 aa16.54■□□□□ 0.24
COL9A1-201ENST00000320755 UPK1BO75841 260 aa16.54■□□□□ 0.24
COL9A1-201ENST00000320755 BMPR1AP36894 532 aa16.54■□□□□ 0.24
COL9A1-201ENST00000320755 ELAVL3Q14576 367 aaKnown RBP16.54■□□□□ 0.24
COL9A1-201ENST00000320755 DCST1Q5T197 706 aa16.54■□□□□ 0.24
COL9A1-201ENST00000320755 MLIPQ5VWP3 458 aa16.54■□□□□ 0.24
COL9A1-201ENST00000320755 TCTN3Q6NUS6 607 aa16.54■□□□□ 0.24
COL9A1-201ENST00000320755 UNC5DQ6UXZ4 953 aa16.54■□□□□ 0.24
COL9A1-201ENST00000320755 LINC00299Q6ZSB3 139 aa16.54■□□□□ 0.24
COL9A1-201ENST00000320755 PDZD3Q86UT5 571 aa16.54■□□□□ 0.24
COL9A1-201ENST00000320755 LACC1Q8IV20 430 aa16.54■□□□□ 0.24
COL9A1-201ENST00000320755 LYSMD2Q8IV50 215 aa16.54■□□□□ 0.24
COL9A1-201ENST00000320755 DCUN1D3Q8IWE4 304 aa16.54■□□□□ 0.24
COL9A1-201ENST00000320755 KBTBD8Q8NFY9 601 aa16.54■□□□□ 0.24
COL9A1-201ENST00000320755 HCAR2Q8TDS4 363 aa16.54■□□□□ 0.24
COL9A1-201ENST00000320755 MAPKAP1Q9BPZ7 522 aa16.54■□□□□ 0.24
COL9A1-201ENST00000320755 ZNF717Q9BY31 904 aaPredicted RBP16.54■□□□□ 0.24
COL9A1-201ENST00000320755 TMEM165Q9HC07 324 aa16.54■□□□□ 0.24
COL9A1-201ENST00000320755 IRAK3Q9Y616 596 aa16.54■□□□□ 0.24
COL9A1-201ENST00000320755 XIRP2A4UGR9 3374 aa16.54■□□□□ 0.24
COL9A1-201ENST00000320755 EDDM13A0A1B0GTR0 161 aa16.54■□□□□ 0.24
COL9A1-201ENST00000320755 TLR4O00206 839 aa16.54■□□□□ 0.24
COL9A1-201ENST00000320755 BSGP35613 385 aa16.54■□□□□ 0.24
COL9A1-201ENST00000320755 SOX3P41225 446 aa16.54■□□□□ 0.24
COL9A1-201ENST00000320755 LIMS1P48059 325 aa16.54■□□□□ 0.24
COL9A1-201ENST00000320755 CCT3P49368 545 aaKnown RBP16.54■□□□□ 0.24
COL9A1-201ENST00000320755 HMGA2P52926 109 aa16.54■□□□□ 0.24
COL9A1-201ENST00000320755 LSM11P83369 360 aaKnown RBP eCLIP16.54■□□□□ 0.24
COL9A1-201ENST00000320755 TARDBPQ13148 414 aaKnown RBP eCLIP16.54■□□□□ 0.24
COL9A1-201ENST00000320755 HEPACAMQ14CZ8 416 aa16.54■□□□□ 0.24
COL9A1-201ENST00000320755 LCTLQ6UWM7 567 aa16.54■□□□□ 0.24
COL9A1-201ENST00000320755 ERN2Q76MJ5 926 aaKnown RBP16.54■□□□□ 0.24
COL9A1-201ENST00000320755 PARP16Q8N5Y8 322 aa16.54■□□□□ 0.24
COL9A1-201ENST00000320755 OR4D11Q8NGI4 311 aa16.54■□□□□ 0.24
COL9A1-201ENST00000320755 C17orf62Q9BQA9 187 aa16.54■□□□□ 0.24
COL9A1-201ENST00000320755 CNPPD1Q9BV87 410 aa16.54■□□□□ 0.24
COL9A1-201ENST00000320755 GIN1Q9NXP7 522 aa16.54■□□□□ 0.24
COL9A1-201ENST00000320755 FTSJ1Q9UET6 329 aa16.54■□□□□ 0.24
COL9A1-201ENST00000320755 MOSPD1Q9UJG1 213 aa16.54■□□□□ 0.24
COL9A1-201ENST00000320755 C17orf113A0A1B0GUU1 675 aa16.53■□□□□ 0.24
COL9A1-201ENST00000320755 ZAR1LA6NP61 321 aa16.53■□□□□ 0.24
COL9A1-201ENST00000320755 M0R3H8 397 aa16.53■□□□□ 0.24
COL9A1-201ENST00000320755 AGRPO00253 132 aa16.53■□□□□ 0.24
COL9A1-201ENST00000320755 CTDSP2O14595 271 aa16.53■□□□□ 0.24
COL9A1-201ENST00000320755 CAPN5O15484 640 aaPredicted RBP16.53■□□□□ 0.24
COL9A1-201ENST00000320755 AQP9O43315 295 aa16.53■□□□□ 0.24
COL9A1-201ENST00000320755 LCMT2O60294 686 aaKnown RBP16.53■□□□□ 0.24
COL9A1-201ENST00000320755 ALOX5P09917 674 aa16.53■□□□□ 0.24
COL9A1-201ENST00000320755 OPRD1P41143 372 aa16.53■□□□□ 0.24
COL9A1-201ENST00000320755 NEURL3Q96EH8 262 aa16.53■□□□□ 0.24
COL9A1-201ENST00000320755 UCK2Q9BZX2 261 aa16.53■□□□□ 0.24
COL9A1-201ENST00000320755 GPR34Q9UPC5 381 aa16.53■□□□□ 0.24
COL9A1-201ENST00000320755 MTCL1Q9Y4B5 1905 aaKnown RBP16.53■□□□□ 0.24
COL9A1-201ENST00000320755 HMGN4O00479 90 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms