RNA–Protein interactions for RNA: ENST00000318988.10

CTDNEP1-201, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-201ENST00000318988 RBM15BQ8NDT2 890 aaKnown RBP25.83■■□□□ 1.73
CTDNEP1-201ENST00000318988 ZFP28Q8NHY6 868 aa25.83■■□□□ 1.73
CTDNEP1-201ENST00000318988 GTF2H4Q92759 462 aa25.83■■□□□ 1.73
CTDNEP1-201ENST00000318988 C1orf21Q9H246 121 aa25.83■■□□□ 1.73
CTDNEP1-201ENST00000318988 MAP10Q9P2G4 905 aa25.83■■□□□ 1.73
CTDNEP1-201ENST00000318988 B3GALT1Q9Y5Z6 326 aa25.83■■□□□ 1.73
CTDNEP1-201ENST00000318988 GVINP1Q7Z2Y8 2422 aa25.83■■□□□ 1.73
CTDNEP1-201ENST00000318988 WASHC1A8K0Z3 465 aa25.83■■□□□ 1.72
CTDNEP1-201ENST00000318988 CSNK2A2P19784 350 aaPredicted RBP25.83■■□□□ 1.72
CTDNEP1-201ENST00000318988 TRPC1P48995 793 aa25.83■■□□□ 1.72
CTDNEP1-201ENST00000318988 NCALDP61601 193 aa25.83■■□□□ 1.72
CTDNEP1-201ENST00000318988 SLC13A2Q13183 592 aa25.83■■□□□ 1.72
CTDNEP1-201ENST00000318988 PRSS53Q2L4Q9 553 aa25.83■■□□□ 1.72
CTDNEP1-201ENST00000318988 TRMT5Q32P41 509 aaKnown RBP25.83■■□□□ 1.72
CTDNEP1-201ENST00000318988 FAM180BQ6P0A1 224 aa25.83■■□□□ 1.72
CTDNEP1-201ENST00000318988 HACD2Q6Y1H2 254 aa25.83■■□□□ 1.72
CTDNEP1-201ENST00000318988 OR4A15Q8NGL6 344 aa25.83■■□□□ 1.72
CTDNEP1-201ENST00000318988 CCDC115Q96NT0 180 aa25.83■■□□□ 1.72
CTDNEP1-201ENST00000318988 BTBD10Q9BSF8 475 aa25.83■■□□□ 1.72
CTDNEP1-201ENST00000318988 PRTFDC1Q9NRG1 225 aa25.83■■□□□ 1.72
CTDNEP1-201ENST00000318988 ZNF282Q9UDV7 671 aaPredicted RBP25.83■■□□□ 1.72
CTDNEP1-201ENST00000318988 CROTQ9UKG9 612 aa25.83■■□□□ 1.72
CTDNEP1-201ENST00000318988 SATB2Q9UPW6 733 aa25.83■■□□□ 1.72
CTDNEP1-201ENST00000318988 MEN1O00255 615 aa25.82■■□□□ 1.72
CTDNEP1-201ENST00000318988 NVLO15381 856 aaKnown RBP25.82■■□□□ 1.72
CTDNEP1-201ENST00000318988 ERN1O75460 977 aaKnown RBP25.82■■□□□ 1.72
CTDNEP1-201ENST00000318988 MPIP34949 423 aa25.82■■□□□ 1.72
CTDNEP1-201ENST00000318988 XKP51811 444 aa25.82■■□□□ 1.72
CTDNEP1-201ENST00000318988 SLC25A3Q00325 362 aa25.82■■□□□ 1.72
CTDNEP1-201ENST00000318988 OCA2Q04671 838 aa25.82■■□□□ 1.72
CTDNEP1-201ENST00000318988 ERV3-1Q14264 604 aa25.82■■□□□ 1.72
CTDNEP1-201ENST00000318988 MPEG1Q2M385 716 aa25.82■■□□□ 1.72
CTDNEP1-201ENST00000318988 DNAL1Q4LDG9 190 aa25.82■■□□□ 1.72
CTDNEP1-201ENST00000318988 MFSD4BQ5TF39 518 aa25.82■■□□□ 1.72
CTDNEP1-201ENST00000318988 CLECL1Q8IZS7 167 aa25.82■■□□□ 1.72
CTDNEP1-201ENST00000318988 ADAMTS14Q8WXS8 1223 aa25.82■■□□□ 1.72
CTDNEP1-201ENST00000318988 OR5P2Q8WZ92 322 aa25.82■■□□□ 1.72
CTDNEP1-201ENST00000318988 SLC7A6OSQ96CW6 309 aaPredicted RBP25.82■■□□□ 1.72
CTDNEP1-201ENST00000318988 DPH2Q9BQC3 489 aaPredicted RBP25.82■■□□□ 1.72
CTDNEP1-201ENST00000318988 ACSS1Q9NUB1 689 aaPredicted RBP25.82■■□□□ 1.72
CTDNEP1-201ENST00000318988 TAS2R1Q9NYW7 299 aa25.82■■□□□ 1.72
CTDNEP1-201ENST00000318988 IFT80Q9P2H3 777 aaPredicted RBP25.82■■□□□ 1.72
CTDNEP1-201ENST00000318988 MAN2B2Q9Y2E5 1009 aa25.82■■□□□ 1.72
CTDNEP1-201ENST00000318988 A0A096LPI6 279 aa25.81■■□□□ 1.72
CTDNEP1-201ENST00000318988 SCN2BO60939 215 aa25.81■■□□□ 1.72
CTDNEP1-201ENST00000318988 CDC123O75794 336 aaPredicted RBP25.81■■□□□ 1.72
CTDNEP1-201ENST00000318988 GPR75O95800 540 aa25.81■■□□□ 1.72
CTDNEP1-201ENST00000318988 C6orf47O95873 294 aa25.81■■□□□ 1.72
CTDNEP1-201ENST00000318988 C8orf89P0DMQ9 161 aa25.81■■□□□ 1.72
CTDNEP1-201ENST00000318988 ZNF28P17035 718 aa25.81■■□□□ 1.72
CTDNEP1-201ENST00000318988 ITGAXP20702 1163 aa25.81■■□□□ 1.72
CTDNEP1-201ENST00000318988 RORAP35398 523 aa25.81■■□□□ 1.72
CTDNEP1-201ENST00000318988 FEN1P39748 380 aaKnown RBP25.81■■□□□ 1.72
CTDNEP1-201ENST00000318988 NCBP2P52298 156 aaKnown RBP eCLIP25.81■■□□□ 1.72
CTDNEP1-201ENST00000318988 HNRNPFP52597 415 aaKnown RBP25.81■■□□□ 1.72
CTDNEP1-201ENST00000318988 FOLH1Q04609 750 aa25.81■■□□□ 1.72
CTDNEP1-201ENST00000318988 TMEM52Q8NDY8 209 aa25.81■■□□□ 1.72
CTDNEP1-201ENST00000318988 FBXO27Q8NI29 283 aa25.81■■□□□ 1.72
CTDNEP1-201ENST00000318988 PMEPA1Q969W9 287 aa25.81■■□□□ 1.72
CTDNEP1-201ENST00000318988 MIEF2Q96C03 454 aa25.81■■□□□ 1.72
CTDNEP1-201ENST00000318988 LRRC58Q96CX6 371 aa25.81■■□□□ 1.72
CTDNEP1-201ENST00000318988 LRFN5Q96NI6 719 aa25.81■■□□□ 1.72
CTDNEP1-201ENST00000318988 CTNSO60931 367 aa25.8■■□□□ 1.72
CTDNEP1-201ENST00000318988 LDB3O75112 727 aa25.8■■□□□ 1.72
CTDNEP1-201ENST00000318988 ABCB1P08183 1280 aaPredicted RBP25.8■■□□□ 1.72
CTDNEP1-201ENST00000318988 PCBP4P57723 403 aaKnown RBP25.8■■□□□ 1.72
CTDNEP1-201ENST00000318988 STX4Q12846 297 aa25.8■■□□□ 1.72
CTDNEP1-201ENST00000318988 DNAJC14Q6Y2X3 702 aaPredicted RBP25.8■■□□□ 1.72
CTDNEP1-201ENST00000318988 OR4N5Q8IXE1 308 aa25.8■■□□□ 1.72
CTDNEP1-201ENST00000318988 CNRIP1Q96F85 164 aaPredicted RBP25.8■■□□□ 1.72
CTDNEP1-201ENST00000318988 HOPXQ9BPY8 73 aaPredicted RBP25.8■■□□□ 1.72
CTDNEP1-201ENST00000318988 INPP5KQ9BT40 448 aa25.8■■□□□ 1.72
CTDNEP1-201ENST00000318988 SERHLQ9NQF3 203 aa25.8■■□□□ 1.72
CTDNEP1-201ENST00000318988 NIPSNAP3AQ9UFN0 247 aaPredicted RBP25.8■■□□□ 1.72
CTDNEP1-201ENST00000318988 GPN3Q9UHW5 284 aaPredicted RBP25.8■■□□□ 1.72
CTDNEP1-201ENST00000318988 VPS4AQ9UN37 437 aa25.8■■□□□ 1.72
CTDNEP1-201ENST00000318988 PCDHGA3Q9Y5H0 932 aa25.8■■□□□ 1.72
CTDNEP1-201ENST00000318988 FAM149AA5PLN7 773 aa25.79■■□□□ 1.72
CTDNEP1-201ENST00000318988 MYO1GB0I1T2 1018 aa25.79■■□□□ 1.72
CTDNEP1-201ENST00000318988 BMP10O95393 424 aa25.79■■□□□ 1.72
CTDNEP1-201ENST00000318988 FRKP42685 505 aaPredicted RBP25.79■■□□□ 1.72
CTDNEP1-201ENST00000318988 HSD17B7P56937 341 aa25.79■■□□□ 1.72
CTDNEP1-201ENST00000318988 MINDY4Q4G0A6 757 aa25.79■■□□□ 1.72
CTDNEP1-201ENST00000318988 ZNF621Q6ZSS3 439 aa25.79■■□□□ 1.72
CTDNEP1-201ENST00000318988 CCDC116Q8IYX3 515 aa25.79■■□□□ 1.72
CTDNEP1-201ENST00000318988 SHISA5Q8N114 240 aa25.79■■□□□ 1.72
CTDNEP1-201ENST00000318988 LRRC25Q8N386 305 aaPredicted RBP25.79■■□□□ 1.72
CTDNEP1-201ENST00000318988 TRIML2Q8N7C3 387 aa25.79■■□□□ 1.72
CTDNEP1-201ENST00000318988 MR1Q95460 341 aa25.79■■□□□ 1.72
CTDNEP1-201ENST00000318988 LRMDAQ9H2I8 198 aa25.79■■□□□ 1.72
CTDNEP1-201ENST00000318988 TAS2R9Q9NYW1 312 aa25.79■■□□□ 1.72
CTDNEP1-201ENST00000318988 PTPRZ1P23471 2315 aaPredicted RBP25.79■■□□□ 1.72
CTDNEP1-201ENST00000318988 PMS2P1A4D2B8 440 aa25.78■■□□□ 1.72
CTDNEP1-201ENST00000318988 FGF17O60258 216 aa25.78■■□□□ 1.72
CTDNEP1-201ENST00000318988 STK17BO94768 372 aa25.78■■□□□ 1.72
CTDNEP1-201ENST00000318988 PORP16435 677 aaPredicted RBP25.78■■□□□ 1.72
CTDNEP1-201ENST00000318988 GPC1P35052 558 aa25.78■■□□□ 1.72
CTDNEP1-201ENST00000318988 ID2Q02363 134 aa25.78■■□□□ 1.72
CTDNEP1-201ENST00000318988 HSPB3Q12988 150 aa25.78■■□□□ 1.72
CTDNEP1-201ENST00000318988 MLC1Q15049 377 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms