RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 SNX8Q9Y5X2 465 aa14.49□□□□□ -0.09
PDLIM5-202ENST00000318007 DMXL2Q8TDJ6 3036 aa14.48□□□□□ -0.09
PDLIM5-202ENST00000318007 TGFBR3LH3BV60 316 aa14.48□□□□□ -0.09
PDLIM5-202ENST00000318007 PDPK1O15530 556 aa14.48□□□□□ -0.09
PDLIM5-202ENST00000318007 CNOT3O75175 753 aaKnown RBP14.48□□□□□ -0.09
PDLIM5-202ENST00000318007 NME6O75414 186 aaPredicted RBP14.48□□□□□ -0.09
PDLIM5-202ENST00000318007 C6orf47O95873 294 aa14.48□□□□□ -0.09
PDLIM5-202ENST00000318007 C1QCP02747 245 aa14.48□□□□□ -0.09
PDLIM5-202ENST00000318007 HBQ1P09105 142 aa14.48□□□□□ -0.09
PDLIM5-202ENST00000318007 AGXTP21549 392 aa14.48□□□□□ -0.09
PDLIM5-202ENST00000318007 CDKN2CP42773 168 aa14.48□□□□□ -0.09
PDLIM5-202ENST00000318007 NCBP2P52298 156 aaKnown RBP eCLIP14.48□□□□□ -0.092e-10■□□□□ 8.4
PDLIM5-202ENST00000318007 CASP9P55211 416 aa14.48□□□□□ -0.09
PDLIM5-202ENST00000318007 RPS18P62269 152 aaKnown RBP14.48□□□□□ -0.09
PDLIM5-202ENST00000318007 TRA2BP62995 288 aaKnown RBP14.48□□□□□ -0.09
PDLIM5-202ENST00000318007 OCA2Q04671 838 aa14.48□□□□□ -0.09
PDLIM5-202ENST00000318007 CAPRIN1Q14444 709 aaKnown RBP14.48□□□□□ -0.09
PDLIM5-202ENST00000318007 LTB4RQ15722 352 aa14.48□□□□□ -0.09
PDLIM5-202ENST00000318007 MAPKAPK3Q16644 382 aa14.48□□□□□ -0.09
PDLIM5-202ENST00000318007 GTDC1Q4AE62 458 aa14.48□□□□□ -0.09
PDLIM5-202ENST00000318007 YOD1Q5VVQ6 348 aaPredicted RBP14.48□□□□□ -0.09
PDLIM5-202ENST00000318007 C6orf89Q6UWU4 347 aa14.48□□□□□ -0.09
PDLIM5-202ENST00000318007 BPHLQ86WA6 291 aaPredicted RBP14.48□□□□□ -0.09
PDLIM5-202ENST00000318007 ZC3H7AQ8IWR0 971 aaKnown RBP14.48□□□□□ -0.09
PDLIM5-202ENST00000318007 OR5AK3PQ8NH89 298 aa14.48□□□□□ -0.09
PDLIM5-202ENST00000318007 TESCQ96BS2 214 aa14.48□□□□□ -0.09
PDLIM5-202ENST00000318007 CMTM5Q96DZ9 223 aa14.48□□□□□ -0.09
PDLIM5-202ENST00000318007 PTCHD1Q96NR3 888 aa14.48□□□□□ -0.09
PDLIM5-202ENST00000318007 BBS4Q96RK4 519 aa14.48□□□□□ -0.09
PDLIM5-202ENST00000318007 NPLQ9BXD5 320 aaPredicted RBP14.48□□□□□ -0.09
PDLIM5-202ENST00000318007 PRTFDC1Q9NRG1 225 aa14.48□□□□□ -0.09
PDLIM5-202ENST00000318007 SLC6A13Q9NSD5 602 aa14.48□□□□□ -0.09
PDLIM5-202ENST00000318007 TAGLN3Q9UI15 199 aa14.48□□□□□ -0.09
PDLIM5-202ENST00000318007 ENTPD4Q9Y227 616 aa14.48□□□□□ -0.09
PDLIM5-202ENST00000318007 A8MUA0 341 aa14.47□□□□□ -0.09
PDLIM5-202ENST00000318007 RRP9O43818 475 aaKnown RBP14.47□□□□□ -0.09
PDLIM5-202ENST00000318007 ZGLP1P0C6A0 271 aa14.47□□□□□ -0.09
PDLIM5-202ENST00000318007 T-ENOLP0DO92 83 aa14.47□□□□□ -0.09
PDLIM5-202ENST00000318007 DRD2P14416 443 aa14.47□□□□□ -0.09
PDLIM5-202ENST00000318007 RBMS1P29558 406 aaKnown RBP14.47□□□□□ -0.09
PDLIM5-202ENST00000318007 XKP51811 444 aa14.47□□□□□ -0.09
PDLIM5-202ENST00000318007 MRPS35P82673 323 aaKnown RBP14.47□□□□□ -0.09
PDLIM5-202ENST00000318007 STX4Q12846 297 aa14.47□□□□□ -0.09
PDLIM5-202ENST00000318007 PDE7AQ13946 482 aa14.47□□□□□ -0.09
PDLIM5-202ENST00000318007 TGIF1Q15583 401 aa14.47□□□□□ -0.09
PDLIM5-202ENST00000318007 ZSCAN26Q16670 478 aa14.47□□□□□ -0.09
PDLIM5-202ENST00000318007 OR52E8Q6IFG1 317 aa14.47□□□□□ -0.09
PDLIM5-202ENST00000318007 R3HCC1LQ7Z5L2 792 aaKnown RBP14.47□□□□□ -0.09
PDLIM5-202ENST00000318007 FAM9CQ8IZT9 166 aa14.47□□□□□ -0.09
PDLIM5-202ENST00000318007 GLB1L3Q8NCI6 653 aaPredicted RBP14.47□□□□□ -0.09
PDLIM5-202ENST00000318007 AURKBQ96GD4 344 aaPredicted RBP14.47□□□□□ -0.09
PDLIM5-202ENST00000318007 SLC46A1Q96NT5 459 aa14.47□□□□□ -0.09
PDLIM5-202ENST00000318007 PANX1Q96RD7 426 aa14.47□□□□□ -0.09
PDLIM5-202ENST00000318007 SLC25A23Q9BV35 468 aa14.47□□□□□ -0.09
PDLIM5-202ENST00000318007 DDA1Q9BW61 102 aa14.47□□□□□ -0.09
PDLIM5-202ENST00000318007 SLC35C2Q9NQQ7 365 aa14.47□□□□□ -0.09
PDLIM5-202ENST00000318007 NECTIN3Q9NQS3 549 aa14.47□□□□□ -0.09
PDLIM5-202ENST00000318007 CES1P1Q9UKY3 287 aa14.47□□□□□ -0.09
PDLIM5-202ENST00000318007 ZNF780BQ9Y6R6 833 aa14.47□□□□□ -0.09
PDLIM5-202ENST00000318007 CEP295Q9C0D2 2601 aa14.47□□□□□ -0.09
PDLIM5-202ENST00000318007 AHCTF1Q8WYP5 2266 aa14.47□□□□□ -0.09
PDLIM5-202ENST00000318007 A0A1W2PP18 115 aa14.47□□□□□ -0.09
PDLIM5-202ENST00000318007 PRMT3O60678 531 aa14.47□□□□□ -0.09
PDLIM5-202ENST00000318007 IL6P05231 212 aa14.47□□□□□ -0.09
PDLIM5-202ENST00000318007 TCN2P20062 427 aa14.47□□□□□ -0.09
PDLIM5-202ENST00000318007 SOAT1P35610 550 aa14.47□□□□□ -0.09
PDLIM5-202ENST00000318007 PLA2G5P39877 138 aa14.47□□□□□ -0.09
PDLIM5-202ENST00000318007 MANFP55145 182 aaKnown RBP14.47□□□□□ -0.09
PDLIM5-202ENST00000318007 WNT3P56703 355 aa14.47□□□□□ -0.09
PDLIM5-202ENST00000318007 NIPAL1Q6NVV3 410 aa14.47□□□□□ -0.09
PDLIM5-202ENST00000318007 C6orf15Q6UXA7 325 aaPredicted RBP14.47□□□□□ -0.09
PDLIM5-202ENST00000318007 CCDC121Q6ZUS5 278 aa14.47□□□□□ -0.09
PDLIM5-202ENST00000318007 LANCL3Q6ZV70 420 aa14.47□□□□□ -0.09
PDLIM5-202ENST00000318007 OR4K14Q8NGD5 310 aa14.47□□□□□ -0.09
PDLIM5-202ENST00000318007 OR4A15Q8NGL6 344 aa14.47□□□□□ -0.09
PDLIM5-202ENST00000318007 OR9A2Q8NGT5 310 aa14.47□□□□□ -0.09
PDLIM5-202ENST00000318007 RP9Q8TA86 221 aaKnown RBP14.47□□□□□ -0.09
PDLIM5-202ENST00000318007 PNPT1Q8TCS8 783 aaKnown RBP14.47□□□□□ -0.09
PDLIM5-202ENST00000318007 NAF1Q96HR8 494 aaKnown RBP14.47□□□□□ -0.09
PDLIM5-202ENST00000318007 SCNM1Q9BWG6 230 aa14.47□□□□□ -0.09
PDLIM5-202ENST00000318007 SLC52A3Q9NQ40 469 aa14.47□□□□□ -0.09
PDLIM5-202ENST00000318007 LANCL2Q9NS86 450 aa14.47□□□□□ -0.09
PDLIM5-202ENST00000318007 ATAD3AQ9NVI7 634 aa14.47□□□□□ -0.09
PDLIM5-202ENST00000318007 GPN3Q9UHW5 284 aaPredicted RBP14.47□□□□□ -0.09
PDLIM5-202ENST00000318007 ATP6V1HQ9UI12 483 aa14.47□□□□□ -0.09
PDLIM5-202ENST00000318007 ACSL6Q9UKU0 697 aa14.47□□□□□ -0.09
PDLIM5-202ENST00000318007 ERVK-11Q9UQG0 969 aa14.47□□□□□ -0.09
PDLIM5-202ENST00000318007 MRPS33Q9Y291 106 aaKnown RBP14.47□□□□□ -0.09
PDLIM5-202ENST00000318007 NUP214P35658 2090 aaPredicted RBP14.46□□□□□ -0.09
PDLIM5-202ENST00000318007 IGHV3-20A0A0C4DH32 117 aa14.46□□□□□ -0.09
PDLIM5-202ENST00000318007 A0A1W2PRB8 838 aa14.46□□□□□ -0.09
PDLIM5-202ENST00000318007 CLDN4O14493 209 aa14.46□□□□□ -0.09
PDLIM5-202ENST00000318007 MRASO14807 208 aa14.46□□□□□ -0.09
PDLIM5-202ENST00000318007 BRINP1O60477 761 aa14.46□□□□□ -0.09
PDLIM5-202ENST00000318007 ANP32DO95626 131 aa14.46□□□□□ -0.09
PDLIM5-202ENST00000318007 IFNA16P05015 189 aa14.46□□□□□ -0.09
PDLIM5-202ENST00000318007 GPC1P35052 558 aa14.46□□□□□ -0.09
PDLIM5-202ENST00000318007 SOX11P35716 441 aa14.46□□□□□ -0.09
PDLIM5-202ENST00000318007 HBA1P69905 142 aa14.46□□□□□ -0.09
PDLIM5-202ENST00000318007 SLC25A3Q00325 362 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms