RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 TFGQ92734 400 aaPredicted RBP13.48□□□□□ -0.25
VRK3-201ENST00000316763 PLEKHA8Q96JA3 519 aa13.48□□□□□ -0.25
VRK3-201ENST00000316763 SPACA7Q96KW9 195 aa13.48□□□□□ -0.25
VRK3-201ENST00000316763 WDR92Q96MX6 357 aa13.48□□□□□ -0.25
VRK3-201ENST00000316763 ORAI3Q9BRQ5 295 aa13.48□□□□□ -0.25
VRK3-201ENST00000316763 PELI2Q9HAT8 420 aa13.48□□□□□ -0.25
VRK3-201ENST00000316763 NECTIN3Q9NQS3 549 aa13.48□□□□□ -0.25
VRK3-201ENST00000316763 C1GALT1Q9NS00 363 aa13.48□□□□□ -0.25
VRK3-201ENST00000316763 GPATCH2Q9NW75 528 aa13.48□□□□□ -0.25
VRK3-201ENST00000316763 TDRKHQ9Y2W6 561 aaKnown RBP13.48□□□□□ -0.25
VRK3-201ENST00000316763 TESMINQ9Y4I5 508 aa13.48□□□□□ -0.25
VRK3-201ENST00000316763 LYVE1Q9Y5Y7 322 aa13.48□□□□□ -0.25
VRK3-201ENST00000316763 THADAQ6YHU6 1953 aa13.48□□□□□ -0.25
VRK3-201ENST00000316763 ZNF318Q5VUA4 2279 aa13.47□□□□□ -0.25
VRK3-201ENST00000316763 GABARAPO95166 117 aa13.47□□□□□ -0.25
VRK3-201ENST00000316763 IL3P08700 152 aa13.47□□□□□ -0.25
VRK3-201ENST00000316763 ZNF12P17014 697 aa13.47□□□□□ -0.25
VRK3-201ENST00000316763 BCKDHBP21953 392 aa13.47□□□□□ -0.25
VRK3-201ENST00000316763 UQCRC2P22695 453 aa13.47□□□□□ -0.25
VRK3-201ENST00000316763 BMXP51813 675 aa13.47□□□□□ -0.25
VRK3-201ENST00000316763 SPIBQ01892 262 aa13.47□□□□□ -0.25
VRK3-201ENST00000316763 SPCS2Q15005 226 aa13.47□□□□□ -0.25
VRK3-201ENST00000316763 CRB2Q5IJ48 1285 aa13.47□□□□□ -0.25
VRK3-201ENST00000316763 SYT6Q5T7P8 510 aaPredicted RBP13.47□□□□□ -0.25
VRK3-201ENST00000316763 PAGE2Q7Z2X7 111 aa13.47□□□□□ -0.25
VRK3-201ENST00000316763 SLC9B2Q86UD5 537 aa13.47□□□□□ -0.25
VRK3-201ENST00000316763 RNF130Q86XS8 419 aa13.47□□□□□ -0.25
VRK3-201ENST00000316763 DEFB119Q8N690 84 aa13.47□□□□□ -0.25
VRK3-201ENST00000316763 LMNTD1Q8N9Z9 388 aa13.47□□□□□ -0.25
VRK3-201ENST00000316763 OR1E3Q8WZA6 343 aa13.47□□□□□ -0.25
VRK3-201ENST00000316763 ABTB1Q969K4 478 aaPredicted RBP13.47□□□□□ -0.25
VRK3-201ENST00000316763 AIF1LQ9BQI0 150 aa13.47□□□□□ -0.25
VRK3-201ENST00000316763 NLNQ9BYT8 704 aa13.47□□□□□ -0.25
VRK3-201ENST00000316763 PCBD2Q9H0N5 130 aa13.47□□□□□ -0.25
VRK3-201ENST00000316763 SPNS1Q9H2V7 528 aa13.47□□□□□ -0.25
VRK3-201ENST00000316763 THSD1Q9NS62 852 aa13.47□□□□□ -0.25
VRK3-201ENST00000316763 TBCCD1Q9NVR7 557 aa13.47□□□□□ -0.25
VRK3-201ENST00000316763 ICKQ9UPZ9 632 aa13.47□□□□□ -0.25
VRK3-201ENST00000316763 POFUT2Q9Y2G5 429 aa13.47□□□□□ -0.25
VRK3-201ENST00000316763 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.47□□□□□ -0.25
VRK3-201ENST00000316763 FAM32AQ9Y421 112 aaKnown RBP13.47□□□□□ -0.25
VRK3-201ENST00000316763 MAP4K5Q9Y4K4 846 aa13.47□□□□□ -0.25
VRK3-201ENST00000316763 A0A1W2PPC4 97 aa13.47□□□□□ -0.25
VRK3-201ENST00000316763 A8MVJ9 347 aa13.47□□□□□ -0.25
VRK3-201ENST00000316763 TMEM229AB2RXF0 380 aa13.47□□□□□ -0.25
VRK3-201ENST00000316763 E9PQ18 207 aa13.47□□□□□ -0.25
VRK3-201ENST00000316763 SEMA3DO95025 777 aa13.47□□□□□ -0.25
VRK3-201ENST00000316763 MT-ND2P03891 347 aa13.47□□□□□ -0.25
VRK3-201ENST00000316763 OPN1SWP03999 348 aa13.47□□□□□ -0.25
VRK3-201ENST00000316763 SP9P0CG40 484 aa13.47□□□□□ -0.25
VRK3-201ENST00000316763 ARAFP10398 606 aa13.47□□□□□ -0.25
VRK3-201ENST00000316763 SERPINB1P30740 379 aa13.47□□□□□ -0.25
VRK3-201ENST00000316763 MAP2K4P45985 399 aa13.47□□□□□ -0.25
VRK3-201ENST00000316763 RABIFP47224 123 aa13.47□□□□□ -0.25
VRK3-201ENST00000316763 SRSF5Q13243 272 aaKnown RBP13.47□□□□□ -0.25
VRK3-201ENST00000316763 CTF1Q16619 201 aa13.47□□□□□ -0.25
VRK3-201ENST00000316763 ENPP7Q6UWV6 458 aa13.47□□□□□ -0.25
VRK3-201ENST00000316763 CCDC81Q6ZN84 652 aa13.47□□□□□ -0.25
VRK3-201ENST00000316763 Q6ZNX1 250 aa13.47□□□□□ -0.25
VRK3-201ENST00000316763 Q6ZSR6 202 aa13.47□□□□□ -0.25
VRK3-201ENST00000316763 FAM129CQ86XR2 697 aa13.47□□□□□ -0.25
VRK3-201ENST00000316763 ZNF740Q8NDX6 193 aa13.47□□□□□ -0.25
VRK3-201ENST00000316763 OR10G2Q8NGC3 310 aa13.47□□□□□ -0.25
VRK3-201ENST00000316763 OR5AR1Q8NGP9 310 aa13.47□□□□□ -0.25
VRK3-201ENST00000316763 PDXPQ96GD0 296 aa13.47□□□□□ -0.25
VRK3-201ENST00000316763 QRFPRQ96P65 431 aa13.47□□□□□ -0.25
VRK3-201ENST00000316763 IL17FQ96PD4 163 aa13.47□□□□□ -0.25
VRK3-201ENST00000316763 OR2M4Q96R27 311 aa13.47□□□□□ -0.25
VRK3-201ENST00000316763 ZNF300Q96RE9 604 aaPredicted RBP13.47□□□□□ -0.25
VRK3-201ENST00000316763 PCED1AQ9H1Q7 454 aa13.47□□□□□ -0.25
VRK3-201ENST00000316763 RHBGQ9H310 441 aa13.47□□□□□ -0.25
VRK3-201ENST00000316763 ZNF556Q9HAH1 456 aa13.47□□□□□ -0.25
VRK3-201ENST00000316763 RASSF1Q9NS23 344 aa13.47□□□□□ -0.25
VRK3-201ENST00000316763 GPR27Q9NS67 375 aa13.47□□□□□ -0.25
VRK3-201ENST00000316763 PNMA8BQ9ULN7 279 aaPredicted RBP13.47□□□□□ -0.25
VRK3-201ENST00000316763 WDR37Q9Y2I8 494 aa13.47□□□□□ -0.25
VRK3-201ENST00000316763 GON4LQ3T8J9 2241 aa13.46□□□□□ -0.25
VRK3-201ENST00000316763 M0R3G1 203 aa13.46□□□□□ -0.25
VRK3-201ENST00000316763 GALR2O43603 387 aaPredicted RBP13.46□□□□□ -0.25
VRK3-201ENST00000316763 SLC35G4P0C7Q5 338 aa13.46□□□□□ -0.25
VRK3-201ENST00000316763 PSMB9P28065 219 aa13.46□□□□□ -0.25
VRK3-201ENST00000316763 EPHA2P29317 976 aa13.46□□□□□ -0.25
VRK3-201ENST00000316763 KRT20P35900 424 aa13.46□□□□□ -0.25
VRK3-201ENST00000316763 GGT2P36268 569 aa13.46□□□□□ -0.25
VRK3-201ENST00000316763 RANBP1P43487 201 aa13.46□□□□□ -0.25
VRK3-201ENST00000316763 SERPINB10P48595 397 aa13.46□□□□□ -0.25
VRK3-201ENST00000316763 CLCNKAP51800 687 aa13.46□□□□□ -0.25
VRK3-201ENST00000316763 CASP9P55211 416 aa13.46□□□□□ -0.25
VRK3-201ENST00000316763 RPL6Q02878 288 aaKnown RBP13.46□□□□□ -0.25
VRK3-201ENST00000316763 EEF1A2Q05639 463 aaKnown RBP13.46□□□□□ -0.25
VRK3-201ENST00000316763 AQP6Q13520 282 aa13.46□□□□□ -0.25
VRK3-201ENST00000316763 CLCA4Q14CN2 919 aa13.46□□□□□ -0.25
VRK3-201ENST00000316763 SLC5A12Q1EHB4 618 aa13.46□□□□□ -0.25
VRK3-201ENST00000316763 MICAQ29983 383 aa13.46□□□□□ -0.25
VRK3-201ENST00000316763 MPEG1Q2M385 716 aa13.46□□□□□ -0.25
VRK3-201ENST00000316763 ZNF528Q3MIS6 628 aa13.46□□□□□ -0.25
VRK3-201ENST00000316763 SLC36A4Q6YBV0 504 aa13.46□□□□□ -0.25
VRK3-201ENST00000316763 LINC00299Q6ZSB3 139 aa13.46□□□□□ -0.25
VRK3-201ENST00000316763 P2RY8Q86VZ1 359 aa13.46□□□□□ -0.25
VRK3-201ENST00000316763 ARMC8Q8IUR7 673 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms