RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 PREPP48147 710 aa13.18□□□□□ -0.3
MKS1-201ENST00000313863 SLC9A3P48764 834 aa13.18□□□□□ -0.3
MKS1-201ENST00000313863 MC1RQ01726 317 aa13.18□□□□□ -0.3
MKS1-201ENST00000313863 CNTN1Q12860 1018 aa13.18□□□□□ -0.3
MKS1-201ENST00000313863 COX10Q12887 443 aa13.18□□□□□ -0.3
MKS1-201ENST00000313863 CCSMST1Q4G0I0 132 aa13.18□□□□□ -0.3
MKS1-201ENST00000313863 GPAT3Q53EU6 434 aa13.18□□□□□ -0.3
MKS1-201ENST00000313863 CEACAM20Q6UY09 585 aa13.18□□□□□ -0.3
MKS1-201ENST00000313863 PHC2Q8IXK0 858 aa13.18□□□□□ -0.3
MKS1-201ENST00000313863 FAM26EQ8N5C1 309 aa13.18□□□□□ -0.3
MKS1-201ENST00000313863 ZNF557Q8N988 423 aaPredicted RBP13.18□□□□□ -0.3
MKS1-201ENST00000313863 APOBEC4Q8WW27 367 aaKnown RBP13.18□□□□□ -0.3
MKS1-201ENST00000313863 RIPOR3Q96MK2 946 aa13.18□□□□□ -0.3
MKS1-201ENST00000313863 FRMD6Q96NE9 622 aa13.18□□□□□ -0.3
MKS1-201ENST00000313863 POLDIP3Q9BY77 421 aaKnown RBP13.18□□□□□ -0.3
MKS1-201ENST00000313863 IL21Q9HBE4 155 aa13.18□□□□□ -0.3
MKS1-201ENST00000313863 ISYNA1Q9NPH2 558 aa13.18□□□□□ -0.3
MKS1-201ENST00000313863 SNX11Q9Y5W9 270 aa13.18□□□□□ -0.3
MKS1-201ENST00000313863 TRAV19A0A0A6YYK7 116 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 TMEM202A6NGA9 273 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 STK25O00506 426 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 SH3BP5O60239 455 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 ALX3O95076 343 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 MYL12AP19105 171 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 MYL9P24844 172 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 AZGP1P25311 298 aaKnown RBP13.17□□□□□ -0.3
MKS1-201ENST00000313863 HLA-DMAP28067 261 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 DMPKQ09013 629 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 HYAL2Q12891 473 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 QPRTQ15274 297 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 DUSP7Q16829 419 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 SLC35F1Q5T1Q4 408 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 KIAA1211LQ6NV74 962 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 Q6ZVL8 140 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 USP30Q70CQ3 517 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 RASGEF1AQ8N9B8 481 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 WDR48Q8TAF3 677 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 CREB3L4Q8TEY5 395 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 ZNF480Q8WV37 535 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 OR5P2Q8WZ92 322 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 GLYATL1Q969I3 302 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 TMEM169Q96HH4 297 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 DIRAS2Q96HU8 199 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 KCTD7Q96MP8 289 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 SGPP1Q9BX95 441 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 EPHX3Q9H6B9 360 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 RNF121Q9H920 327 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 ANKRA2Q9H9E1 313 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 TIGARQ9NQ88 270 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 TXNL4BQ9NX01 149 aaKnown RBP13.17□□□□□ -0.3
MKS1-201ENST00000313863 CLEC2DQ9UHP7 191 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 TET1Q8NFU7 2136 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 FFAR1O14842 300 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 TBX19O60806 448 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 C1orf105O95561 183 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 RECKO95980 971 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 TGFB1P01137 390 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 KLK1P06870 262 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 IL3P08700 152 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 TSPAN19P0C672 248 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 NR2F6P10588 404 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 NPPBP16860 134 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 XPAP23025 273 aaPredicted RBP13.17□□□□□ -0.3
MKS1-201ENST00000313863 LIM2P55344 173 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 DAB2P98082 770 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 CHRNEQ04844 493 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 PUM1Q14671 1186 aaKnown RBP eCLIP13.17□□□□□ -0.3
MKS1-201ENST00000313863 GPNMBQ14956 572 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 MPEG1Q2M385 716 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 LRRC73Q5JTD7 316 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 LCN1P1Q5VSP4 162 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 SAXO2Q658L1 398 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 NXPE4Q6UWF7 544 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 CD300LDQ6UXZ3 194 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 VASH1Q7L8A9 365 aaPredicted RBP13.17□□□□□ -0.3
MKS1-201ENST00000313863 DDX53Q86TM3 631 aaKnown RBP13.17□□□□□ -0.3
MKS1-201ENST00000313863 LAPTM4BQ86VI4 370 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 PEX5LQ8IYB4 626 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 TCEANCQ8N8B7 351 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 ENKURQ8TC29 256 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 SLC5A11Q8WWX8 675 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 ZNF354BQ96LW1 612 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 NELL2Q99435 816 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 MCOLN1Q9GZU1 580 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 OR51B5Q9H339 312 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 NEUROD4Q9HD90 331 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 ABCB9Q9NP78 766 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 SPG21Q9NZD8 308 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 GSTK1Q9Y2Q3 226 aa13.17□□□□□ -0.3
MKS1-201ENST00000313863 MTCL1Q9Y4B5 1905 aaKnown RBP13.17□□□□□ -0.3
MKS1-201ENST00000313863 AP3D1O14617 1153 aa13.16□□□□□ -0.3
MKS1-201ENST00000313863 TFECO14948 347 aaPredicted RBP13.16□□□□□ -0.3
MKS1-201ENST00000313863 ARHGEF9O43307 516 aa13.16□□□□□ -0.3
MKS1-201ENST00000313863 HCN1O60741 890 aa13.16□□□□□ -0.3
MKS1-201ENST00000313863 MMP20O60882 483 aa13.16□□□□□ -0.3
MKS1-201ENST00000313863 GUCY1B2O75343 617 aa13.16□□□□□ -0.3
MKS1-201ENST00000313863 HBQ1P09105 142 aa13.16□□□□□ -0.3
MKS1-201ENST00000313863 ACADMP11310 421 aa13.16□□□□□ -0.3
MKS1-201ENST00000313863 PTBP1P26599 531 aaKnown RBP eCLIP13.16□□□□□ -0.3
MKS1-201ENST00000313863 GABRR2P28476 465 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms