RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 BLOC1S1P78537 153 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 NFATC3Q12968 1075 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 PMS2P3Q13401 168 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 COL9A3Q14050 684 aaPredicted RBP7.86□□□□□ -1.15
VPS41-202ENST00000310301 CLCA4Q14CN2 919 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 MAPK14Q16539 360 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 PAQR3Q6TCH7 311 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 ENPP7Q6UWV6 458 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 METTL21AQ8WXB1 218 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 PMEPA1Q969W9 287 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 ELSPBP1Q96BH3 223 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 ACTR6Q9GZN1 396 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 FTSJ1Q9UET6 329 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 GLS2Q9UI32 602 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 KAT6AQ92794 2004 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 OR6C74A6NCV1 312 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 PROM1O43490 865 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 MT-ND5P03915 603 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 ZNF35P13682 527 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 RGS6P49758 472 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 MLLT10P55197 1068 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 FAM109BQ6ICB4 259 aaPredicted RBP7.86□□□□□ -1.15
VPS41-202ENST00000310301 LINC00471Q8N535 108 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 ZNF565Q8N9K5 539 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 OR2AP1Q8NGE2 309 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 OR14K1Q8NGZ2 314 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 THEM6Q8WUY1 208 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 TFAP2BQ92481 460 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 OSBPL2Q9H1P3 480 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 SIX2Q9NPC8 291 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 PCDHB16Q9NRJ7 776 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 VPS29Q9UBQ0 182 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 ZFR2Q9UPR6 939 aaKnown RBP7.86□□□□□ -1.15
VPS41-202ENST00000310301 A0A1B0GVT2 93 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 WNT9AO14904 365 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 RCBTB2O95199 551 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 IFNA17P01571 189 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 IL12BP29460 328 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 CNR2P34972 360 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 ALDH3B2P48448 385 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 FGFBP1Q14512 234 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 ELP2Q6IA86 826 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 C22orf42Q6IC83 251 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 Q7L0L9 218 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 TSPAN33Q86UF1 283 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 OR7D4Q8NG98 312 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 SUN3Q8TAQ9 357 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 RHBDD1Q8TEB9 315 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 EDAQ92838 391 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 CLSTN3Q9BQT9 956 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 TTTY10Q9BZA0 68 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 SUV39H2Q9H5I1 410 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 TMEM59LQ9UK28 342 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 TRIM64A6NGJ6 449 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 TRIM64BA6NI03 449 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 MT-ND2P03891 347 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 G6PDP11413 515 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 GGT5P36269 586 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 CDK6Q00534 326 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 NTRK2Q16620 822 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 RPS27LQ71UM5 84 aaKnown RBP7.86□□□□□ -1.15
VPS41-202ENST00000310301 CARM1Q86X55 608 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 BEST3Q8N1M1 668 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 FTMTQ8N4E7 242 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 LMX1AQ8TE12 382 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 CYP2S1Q96SQ9 504 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 SSX3Q99909 188 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 SMG9Q9H0W8 520 aaKnown RBP7.86□□□□□ -1.15
VPS41-202ENST00000310301 VNN3Q9NY84 501 aa7.86□□□□□ -1.15
VPS41-202ENST00000310301 AJAP1Q9UKB5 411 aaPredicted RBP7.86□□□□□ -1.15
VPS41-202ENST00000310301 SOCS2O14508 198 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 SEMA4FO95754 770 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 PAK4O96013 591 aaPredicted RBP7.85□□□□□ -1.15
VPS41-202ENST00000310301 KLK3P07288 261 aaPredicted RBP7.85□□□□□ -1.15
VPS41-202ENST00000310301 IL3P08700 152 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 HTR1AP08908 422 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 UNGP13051 313 aaPredicted RBP7.85□□□□□ -1.15
VPS41-202ENST00000310301 HSD11B1P28845 292 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 ADH7P40394 386 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 HLCSP50747 726 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 DSC1Q08554 894 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 KCNJ11Q14654 390 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 PCBP2Q15366 365 aaKnown RBP eCLIP7.85□□□□□ -1.153e-8■■■■■ 34.3
VPS41-202ENST00000310301 MSS51Q4VC12 460 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 PHF19Q5T6S3 580 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 GPRC6AQ5T6X5 926 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 ACBD4Q8NC06 268 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 SLC35B2Q8TB61 432 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 SLC25A36Q96CQ1 311 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 NUS1Q96E22 293 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 RPL10LQ96L21 214 aaKnown RBP7.85□□□□□ -1.15
VPS41-202ENST00000310301 TREX2Q9BQ50 279 aaPredicted RBP7.85□□□□□ -1.15
VPS41-202ENST00000310301 SLC5A7Q9GZV3 580 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 CPNE5Q9HCH3 593 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 ZCCHC3Q9NUD5 404 aaKnown RBP7.85□□□□□ -1.15
VPS41-202ENST00000310301 MRPL15Q9P015 296 aaKnown RBP7.85□□□□□ -1.15
VPS41-202ENST00000310301 CDC14AQ9UNH5 594 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 HEMK1Q9Y5R4 338 aaPredicted RBP7.85□□□□□ -1.15
VPS41-202ENST00000310301 TRBV23OR9-2A0A075B6M9 112 aa7.85□□□□□ -1.15
VPS41-202ENST00000310301 BHMG1C9JSJ3 638 aaPredicted RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms