RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 TBC1D3KA0A087X1G2 549 aa10.97□□□□□ -0.65
PTPN2-201ENST00000309660 TBC1D3FA6NER0 549 aaPredicted RBP10.97□□□□□ -0.65
PTPN2-201ENST00000309660 SOBPA7XYQ1 873 aa10.97□□□□□ -0.65
PTPN2-201ENST00000309660 TBC1D3LB9A6J9 549 aa10.97□□□□□ -0.65
PTPN2-201ENST00000309660 TBC1D3HP0C7X1 549 aa10.97□□□□□ -0.65
PTPN2-201ENST00000309660 SERPINB10P48595 397 aa10.97□□□□□ -0.65
PTPN2-201ENST00000309660 PUM1Q14671 1186 aaKnown RBP eCLIP10.97□□□□□ -0.65
PTPN2-201ENST00000309660 INAQ16352 499 aa10.97□□□□□ -0.65
PTPN2-201ENST00000309660 C9orf50Q5SZB4 431 aa10.97□□□□□ -0.65
PTPN2-201ENST00000309660 C10orf62Q5T681 223 aaPredicted RBP10.97□□□□□ -0.65
PTPN2-201ENST00000309660 SYT6Q5T7P8 510 aaPredicted RBP10.97□□□□□ -0.65
PTPN2-201ENST00000309660 NDUFAF5Q5TEU4 345 aa10.97□□□□□ -0.65
PTPN2-201ENST00000309660 TBC1D3GQ6DHY5 549 aa10.97□□□□□ -0.65
PTPN2-201ENST00000309660 TBC1D3CQ6IPX1 549 aa10.97□□□□□ -0.65
PTPN2-201ENST00000309660 TBC1D3Q8IZP1 549 aaPredicted RBP10.97□□□□□ -0.65
PTPN2-201ENST00000309660 RGMAQ96B86 450 aa10.97□□□□□ -0.65
PTPN2-201ENST00000309660 COX14Q96I36 57 aa10.97□□□□□ -0.65
PTPN2-201ENST00000309660 CHCHD6Q9BRQ6 235 aa10.97□□□□□ -0.65
PTPN2-201ENST00000309660 DPH7Q9BTV6 452 aa10.97□□□□□ -0.65
PTPN2-201ENST00000309660 ITPAQ9BY32 194 aa10.97□□□□□ -0.65
PTPN2-201ENST00000309660 KLHL31Q9H511 634 aa10.97□□□□□ -0.65
PTPN2-201ENST00000309660 RERGLQ9H628 205 aa10.97□□□□□ -0.65
PTPN2-201ENST00000309660 RNF167Q9H6Y7 350 aa10.97□□□□□ -0.65
PTPN2-201ENST00000309660 ATXN8OSP0DMR3 200 aa10.97□□□□□ -0.65
PTPN2-201ENST00000309660 GADD45AP24522 165 aa10.97□□□□□ -0.65
PTPN2-201ENST00000309660 CNR2P34972 360 aa10.97□□□□□ -0.65
PTPN2-201ENST00000309660 PBX2P40425 430 aa10.97□□□□□ -0.65
PTPN2-201ENST00000309660 NCBP2P52298 156 aaKnown RBP eCLIP10.97□□□□□ -0.65
PTPN2-201ENST00000309660 LIM2P55344 173 aa10.97□□□□□ -0.65
PTPN2-201ENST00000309660 CDC42P60953 191 aa10.97□□□□□ -0.65
PTPN2-201ENST00000309660 PIN1Q13526 163 aaPredicted RBP10.97□□□□□ -0.65
PTPN2-201ENST00000309660 KLHL17Q6TDP4 642 aa10.97□□□□□ -0.65
PTPN2-201ENST00000309660 ADAMTSL4Q6UY14 1074 aa10.97□□□□□ -0.65
PTPN2-201ENST00000309660 TRUB1Q8WWH5 349 aaKnown RBP10.97□□□□□ -0.65
PTPN2-201ENST00000309660 IPCEF1Q8WWN9 437 aaPredicted RBP10.97□□□□□ -0.65
PTPN2-201ENST00000309660 OR5P2Q8WZ92 322 aa10.97□□□□□ -0.65
PTPN2-201ENST00000309660 MYDGFQ969H8 173 aa10.97□□□□□ -0.65
PTPN2-201ENST00000309660 ARMC5Q96C12 935 aa10.97□□□□□ -0.65
PTPN2-201ENST00000309660 MTERF3Q96E29 417 aa10.97□□□□□ -0.65
PTPN2-201ENST00000309660 ZBED6CLQ96FA7 236 aaPredicted RBP10.97□□□□□ -0.65
PTPN2-201ENST00000309660 COX4I2Q96KJ9 171 aa10.97□□□□□ -0.65
PTPN2-201ENST00000309660 PITX2Q99697 317 aa10.97□□□□□ -0.65
PTPN2-201ENST00000309660 ZNF717Q9BY31 904 aaPredicted RBP10.97□□□□□ -0.65
PTPN2-201ENST00000309660 GABARAPL3Q9BY60 117 aa10.97□□□□□ -0.65
PTPN2-201ENST00000309660 PHPT1Q9NRX4 125 aaPredicted RBP10.97□□□□□ -0.65
PTPN2-201ENST00000309660 THAP10Q9P2Z0 257 aaPredicted RBP10.97□□□□□ -0.65
PTPN2-201ENST00000309660 PCDHGA2Q9Y5H1 932 aa10.97□□□□□ -0.65
PTPN2-201ENST00000309660 TRANK1O15050 2925 aa10.96□□□□□ -0.65
PTPN2-201ENST00000309660 M0R3H8 397 aa10.96□□□□□ -0.65
PTPN2-201ENST00000309660 TNNI3P19429 210 aa10.96□□□□□ -0.65
PTPN2-201ENST00000309660 XCR1P46094 333 aa10.96□□□□□ -0.65
PTPN2-201ENST00000309660 CRISP3P54108 245 aa10.96□□□□□ -0.65
PTPN2-201ENST00000309660 RPA4Q13156 261 aa10.96□□□□□ -0.65
PTPN2-201ENST00000309660 LASP1Q14847 261 aaKnown RBP10.96□□□□□ -0.65
PTPN2-201ENST00000309660 MLF2Q15773 248 aaPredicted RBP10.96□□□□□ -0.65
PTPN2-201ENST00000309660 CRB2Q5IJ48 1285 aa10.96□□□□□ -0.65
PTPN2-201ENST00000309660 Q6ZNX1 250 aa10.96□□□□□ -0.65
PTPN2-201ENST00000309660 DCDC5Q6ZRR9 648 aa10.96□□□□□ -0.65
PTPN2-201ENST00000309660 IKBIPQ70UQ0 350 aa10.96□□□□□ -0.65
PTPN2-201ENST00000309660 CCDC116Q8IYX3 515 aa10.96□□□□□ -0.65
PTPN2-201ENST00000309660 DNAJC22Q8N4W6 341 aa10.96□□□□□ -0.65
PTPN2-201ENST00000309660 HERVK_113Q902F9 699 aa10.96□□□□□ -0.65
PTPN2-201ENST00000309660 RAB7BQ96AH8 199 aa10.96□□□□□ -0.65
PTPN2-201ENST00000309660 TEFMQ96QE5 360 aaKnown RBP10.96□□□□□ -0.65
PTPN2-201ENST00000309660 WFDC6Q9BQY6 131 aa10.96□□□□□ -0.65
PTPN2-201ENST00000309660 QRSL1Q9H0R6 528 aaKnown RBP10.96□□□□□ -0.65
PTPN2-201ENST00000309660 DCSTAMPQ9H295 470 aa10.96□□□□□ -0.65
PTPN2-201ENST00000309660 POLE4Q9NR33 117 aa10.96□□□□□ -0.65
PTPN2-201ENST00000309660 WBP1LQ9NX94 342 aa10.96□□□□□ -0.65
PTPN2-201ENST00000309660 HEATR5BQ9P2D3 2071 aa10.96□□□□□ -0.65
PTPN2-201ENST00000309660 A0A1W2PQU0 124 aa10.96□□□□□ -0.66
PTPN2-201ENST00000309660 TRIM64BA6NI03 449 aa10.96□□□□□ -0.66
PTPN2-201ENST00000309660 CLCA1A8K7I4 914 aa10.96□□□□□ -0.66
PTPN2-201ENST00000309660 ISM1B1AKI9 464 aa10.96□□□□□ -0.66
PTPN2-201ENST00000309660 B4GALT2O60909 372 aa10.96□□□□□ -0.66
PTPN2-201ENST00000309660 APODP05090 189 aa10.96□□□□□ -0.66
PTPN2-201ENST00000309660 GRK3P35626 688 aa10.96□□□□□ -0.66
PTPN2-201ENST00000309660 BUD31P41223 144 aaPredicted RBP10.96□□□□□ -0.66
PTPN2-201ENST00000309660 RPS3AP61247 264 aaKnown RBP10.96□□□□□ -0.66
PTPN2-201ENST00000309660 CSNK1G2P78368 415 aa10.96□□□□□ -0.66
PTPN2-201ENST00000309660 EEF1A2Q05639 463 aaKnown RBP10.96□□□□□ -0.66
PTPN2-201ENST00000309660 FGL2Q14314 439 aa10.96□□□□□ -0.66
PTPN2-201ENST00000309660 DGLUCYQ7Z3D6 616 aa10.96□□□□□ -0.66
PTPN2-201ENST00000309660 DEPDC4Q8N2C3 294 aa10.96□□□□□ -0.66
PTPN2-201ENST00000309660 OR4C15Q8NGM1 316 aa10.96□□□□□ -0.66
PTPN2-201ENST00000309660 RHOXF1Q8NHV9 184 aa10.96□□□□□ -0.66
PTPN2-201ENST00000309660 MCFD2Q8NI22 146 aa10.96□□□□□ -0.66
PTPN2-201ENST00000309660 PSMA8Q8TAA3 256 aa10.96□□□□□ -0.66
PTPN2-201ENST00000309660 YIPF6Q96EC8 236 aa10.96□□□□□ -0.66
PTPN2-201ENST00000309660 QRFPRQ96P65 431 aa10.96□□□□□ -0.66
PTPN2-201ENST00000309660 FCRL4Q96PJ5 515 aa10.96□□□□□ -0.66
PTPN2-201ENST00000309660 HDAC8Q9BY41 377 aa10.96□□□□□ -0.66
PTPN2-201ENST00000309660 EXOSC4Q9NPD3 245 aaKnown RBP10.96□□□□□ -0.66
PTPN2-201ENST00000309660 ZNF226Q9NYT6 803 aa10.96□□□□□ -0.66
PTPN2-201ENST00000309660 DNAJC27Q9NZQ0 273 aa10.96□□□□□ -0.66
PTPN2-201ENST00000309660 PCDHGB1Q9Y5G3 927 aa10.96□□□□□ -0.66
PTPN2-201ENST00000309660 PRUNE2Q8WUY3 3088 aa10.96□□□□□ -0.66
PTPN2-201ENST00000309660 A0A1W2PS29 197 aa10.96□□□□□ -0.66
PTPN2-201ENST00000309660 OR2A25A4D2G3 310 aa10.96□□□□□ -0.66
PTPN2-201ENST00000309660 PTHP01270 115 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms