RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 CAMK2AQ9UQM7 478 aa10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 A0A0A6YYC8 382 aaPredicted RBP10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 I3L1I5 382 aaPredicted RBP10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 CERS1P27544 350 aa10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 SMSP52788 366 aa10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 PGGT1BP53609 377 aa10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 INHBCP55103 352 aa10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 PCLAFQ15004 111 aa10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 FAM160A2Q8N612 972 aaPredicted RBP10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 CTRCQ99895 268 aa10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 STOX2Q9P2F5 926 aaPredicted RBP10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 RDH16O75452 317 aa10.23□□□□□ -0.77
SYNPO2-201ENST00000307142 GATBO75879 557 aaKnown RBP10.23□□□□□ -0.77
SYNPO2-201ENST00000307142 ABLIM3O94929 683 aa10.23□□□□□ -0.77
SYNPO2-201ENST00000307142 RLN1P04808 185 aa10.23□□□□□ -0.77
SYNPO2-201ENST00000307142 SCN1BQ07699 218 aa10.23□□□□□ -0.77
SYNPO2-201ENST00000307142 RAB39AQ14964 217 aa10.23□□□□□ -0.77
SYNPO2-201ENST00000307142 OR4D1Q15615 310 aa10.23□□□□□ -0.77
SYNPO2-201ENST00000307142 NPTX1Q15818 432 aa10.23□□□□□ -0.77
SYNPO2-201ENST00000307142 EXOC3L2Q2M3D2 409 aa10.23□□□□□ -0.77
SYNPO2-201ENST00000307142 LRIF1Q5T3J3 769 aa10.23□□□□□ -0.77
SYNPO2-201ENST00000307142 MEIOBQ8N635 442 aa10.23□□□□□ -0.77
SYNPO2-201ENST00000307142 UFD1Q92890 307 aa10.23□□□□□ -0.77
SYNPO2-201ENST00000307142 ANKRD27Q96NW4 1050 aa10.23□□□□□ -0.77
SYNPO2-201ENST00000307142 CHID1Q9BWS9 393 aa10.23□□□□□ -0.77
SYNPO2-201ENST00000307142 SMPD3Q9NY59 655 aaPredicted RBP10.23□□□□□ -0.77
SYNPO2-201ENST00000307142 RHCGQ9UBD6 479 aa10.23□□□□□ -0.77
SYNPO2-201ENST00000307142 MAN2B2Q9Y2E5 1009 aa10.23□□□□□ -0.77
SYNPO2-201ENST00000307142 PLOD3O60568 738 aa10.23□□□□□ -0.77
SYNPO2-201ENST00000307142 DRD2P14416 443 aa10.23□□□□□ -0.77
SYNPO2-201ENST00000307142 ARHGDIBP52566 201 aa10.23□□□□□ -0.77
SYNPO2-201ENST00000307142 TMEM44Q2T9K0 475 aa10.23□□□□□ -0.77
SYNPO2-201ENST00000307142 OR5K1Q8NHB7 308 aa10.23□□□□□ -0.77
SYNPO2-201ENST00000307142 PCDHAC1Q9H158 963 aa10.23□□□□□ -0.77
SYNPO2-201ENST00000307142 OBP2AQ9NY56 170 aa10.23□□□□□ -0.77
SYNPO2-201ENST00000307142 USP3Q9Y6I4 520 aa10.23□□□□□ -0.77
SYNPO2-201ENST00000307142 FER1L6Q2WGJ9 1857 aa10.23□□□□□ -0.77
SYNPO2-201ENST00000307142 ATAD5Q96QE3 1844 aa10.23□□□□□ -0.77
SYNPO2-201ENST00000307142 H3BUI4 141 aa10.23□□□□□ -0.77
SYNPO2-201ENST00000307142 CD68P34810 354 aaPredicted RBP10.23□□□□□ -0.77
SYNPO2-201ENST00000307142 RHEBL1Q8TAI7 183 aa10.23□□□□□ -0.77
SYNPO2-201ENST00000307142 MCHR1Q99705 422 aa10.23□□□□□ -0.77
SYNPO2-201ENST00000307142 GNG8Q9UK08 70 aa10.23□□□□□ -0.77
SYNPO2-201ENST00000307142 AP1M2Q9Y6Q5 423 aa10.23□□□□□ -0.77
SYNPO2-201ENST00000307142 PLXNB2O15031 1838 aa10.23□□□□□ -0.77
SYNPO2-201ENST00000307142 SNPHO15079 494 aa10.23□□□□□ -0.77
SYNPO2-201ENST00000307142 PSIP1O75475 530 aaKnown RBP10.23□□□□□ -0.77
SYNPO2-201ENST00000307142 GSTM3P21266 225 aa10.23□□□□□ -0.77
SYNPO2-201ENST00000307142 FAM86B1Q8N7N1 296 aa10.23□□□□□ -0.77
SYNPO2-201ENST00000307142 PELI2Q9HAT8 420 aa10.23□□□□□ -0.77
SYNPO2-201ENST00000307142 DFNA5O60443 496 aa10.23□□□□□ -0.77
SYNPO2-201ENST00000307142 DNAJA1P31689 397 aaKnown RBP10.23□□□□□ -0.77
SYNPO2-201ENST00000307142 TPMTP51580 245 aa10.23□□□□□ -0.77
SYNPO2-201ENST00000307142 FAM180BQ6P0A1 224 aa10.23□□□□□ -0.77
SYNPO2-201ENST00000307142 TSSK4Q6SA08 328 aa10.23□□□□□ -0.77
SYNPO2-201ENST00000307142 FAM131AQ6UXB0 335 aa10.23□□□□□ -0.77
SYNPO2-201ENST00000307142 TIFABQ6ZNK6 161 aa10.23□□□□□ -0.77
SYNPO2-201ENST00000307142 LAPTM4BQ86VI4 370 aa10.23□□□□□ -0.77
SYNPO2-201ENST00000307142 APLFQ8IW19 511 aaPredicted RBP10.23□□□□□ -0.77
SYNPO2-201ENST00000307142 CBR4Q8N4T8 237 aa10.23□□□□□ -0.77
SYNPO2-201ENST00000307142 PYURFQ96I23 114 aa10.23□□□□□ -0.77
SYNPO2-201ENST00000307142 CXCL16Q9H2A7 254 aa10.23□□□□□ -0.77
SYNPO2-201ENST00000307142 MUTYHQ9UIF7 546 aa10.23□□□□□ -0.77
SYNPO2-201ENST00000307142 NFS1Q9Y697 457 aa10.23□□□□□ -0.77
SYNPO2-201ENST00000307142 ZBTB22O15209 634 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 ZNF821O75541 412 aaPredicted RBP10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 PVRP15151 417 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 CD46P15529 392 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 SLC6A6P31641 620 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 SFTPDP35247 375 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 RACK1P63244 317 aaKnown RBP10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 MADCAM1Q13477 382 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 LARP4Q71RC2 724 aaKnown RBP eCLIP10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 FAM117AQ9C073 453 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 PCDH10Q9P2E7 1040 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 DNAJB9Q9UBS3 223 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 GIMAP2Q9UG22 337 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 CCDC182A6NF36 153 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 H3BML4 177 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 VILLO15195 856 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 TCN2P20062 427 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 MSX1P28360 303 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 RRADP55042 308 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 OR12D2P58182 307 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 FAM189BP81408 668 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 TECRLQ5HYJ1 363 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 NDUFAF5Q5TEU4 345 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 UNQ6126/PRO20091Q6UXV3 157 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 ZNF627Q7L945 461 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 KCMF1Q9P0J7 381 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 WRBO00258 174 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 HSD3B1P14060 373 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 HSD3B2P26439 372 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 GDF1P27539 372 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 ACSL1P33121 698 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 ZNF630Q2M218 657 aaPredicted RBP10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 ZNF101Q8IZC7 436 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 IFI44Q8TCB0 444 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 AGAP11Q8TF27 550 aa10.22□□□□□ -0.77
SYNPO2-201ENST00000307142 ZNF778Q96MU6 729 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms