RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 TMEM198Q66K66 360 aa12.9□□□□□ -0.34
TRIM56-201ENST00000306085 OR56A3Q8NH54 315 aa12.9□□□□□ -0.34
TRIM56-201ENST00000306085 DNAJB8Q8NHS0 232 aa12.9□□□□□ -0.34
TRIM56-201ENST00000306085 CYP2S1Q96SQ9 504 aa12.9□□□□□ -0.34
TRIM56-201ENST00000306085 TRPM1Q7Z4N2 1603 aa12.9□□□□□ -0.34
TRIM56-201ENST00000306085 ASTN1O14525 1302 aa12.9□□□□□ -0.34
TRIM56-201ENST00000306085 HOXD8P13378 290 aaPredicted RBP12.9□□□□□ -0.34
TRIM56-201ENST00000306085 PRPH2P23942 346 aa12.9□□□□□ -0.34
TRIM56-201ENST00000306085 NPRL3Q12980 569 aa12.9□□□□□ -0.34
TRIM56-201ENST00000306085 CYBRD1Q53TN4 286 aa12.9□□□□□ -0.34
TRIM56-201ENST00000306085 MON1BQ7L1V2 547 aa12.9□□□□□ -0.34
TRIM56-201ENST00000306085 THAP4Q8WY91 577 aa12.9□□□□□ -0.34
TRIM56-201ENST00000306085 AKT1S1Q96B36 256 aa12.9□□□□□ -0.34
TRIM56-201ENST00000306085 CNTN6Q9UQ52 1028 aa12.9□□□□□ -0.34
TRIM56-201ENST00000306085 PTCH2Q9Y6C5 1203 aa12.9□□□□□ -0.34
TRIM56-201ENST00000306085 ARHGAP19Q14CB8 494 aa12.9□□□□□ -0.34
TRIM56-201ENST00000306085 ZNF829Q3KNS6 432 aaPredicted RBP12.9□□□□□ -0.34
TRIM56-201ENST00000306085 TMEM41BQ5BJD5 291 aa12.9□□□□□ -0.34
TRIM56-201ENST00000306085 ALDH16A1Q8IZ83 802 aa12.9□□□□□ -0.34
TRIM56-201ENST00000306085 RXFP3Q9NSD7 469 aa12.9□□□□□ -0.34
TRIM56-201ENST00000306085 STT3AP46977 705 aa12.9□□□□□ -0.34
TRIM56-201ENST00000306085 NT5DC1Q5TFE4 455 aa12.9□□□□□ -0.34
TRIM56-201ENST00000306085 CMTM1Q8IZ96 169 aa12.9□□□□□ -0.34
TRIM56-201ENST00000306085 CCDC71LQ8N9Z2 235 aa12.9□□□□□ -0.34
TRIM56-201ENST00000306085 IL21RQ9HBE5 538 aa12.9□□□□□ -0.34
TRIM56-201ENST00000306085 SACM1LQ9NTJ5 587 aa12.9□□□□□ -0.34
TRIM56-201ENST00000306085 CDC14AQ9UNH5 594 aa12.9□□□□□ -0.34
TRIM56-201ENST00000306085 ROBO2Q9HCK4 1378 aa12.9□□□□□ -0.34
TRIM56-201ENST00000306085 UBFD1O14562 309 aaKnown RBP12.9□□□□□ -0.34
TRIM56-201ENST00000306085 ATE1O95260 518 aa12.9□□□□□ -0.34
TRIM56-201ENST00000306085 SNRNP70P08621 437 aaKnown RBP12.9□□□□□ -0.34
TRIM56-201ENST00000306085 OR1E2P47887 323 aa12.9□□□□□ -0.34
TRIM56-201ENST00000306085 RAB41Q5JT25 222 aa12.9□□□□□ -0.34
TRIM56-201ENST00000306085 HS3ST5Q8IZT8 346 aa12.9□□□□□ -0.34
TRIM56-201ENST00000306085 MMP27Q9H306 513 aa12.9□□□□□ -0.34
TRIM56-201ENST00000306085 CARS2Q9HA77 564 aaKnown RBP12.9□□□□□ -0.34
TRIM56-201ENST00000306085 CRB1P82279 1406 aa12.9□□□□□ -0.34
TRIM56-201ENST00000306085 GLOD5A6NK44 160 aa12.9□□□□□ -0.34
TRIM56-201ENST00000306085 ARVCFO00192 962 aa12.9□□□□□ -0.34
TRIM56-201ENST00000306085 WDR20Q8TBZ3 569 aa12.9□□□□□ -0.34
TRIM56-201ENST00000306085 CPXM1Q96SM3 734 aa12.9□□□□□ -0.34
TRIM56-201ENST00000306085 SLC2A8Q9NY64 477 aa12.9□□□□□ -0.34
TRIM56-201ENST00000306085 PUS1Q9Y606 427 aaKnown RBP eCLIP12.9□□□□□ -0.34
TRIM56-201ENST00000306085 SULT1C2O00338 296 aa12.9□□□□□ -0.34
TRIM56-201ENST00000306085 CDC123O75794 336 aaPredicted RBP12.9□□□□□ -0.34
TRIM56-201ENST00000306085 RSC1A1Q92681 617 aa12.9□□□□□ -0.34
TRIM56-201ENST00000306085 SCML2Q9UQR0 700 aa12.9□□□□□ -0.34
TRIM56-201ENST00000306085 PRDM15P57071 1507 aaPredicted RBP12.9□□□□□ -0.34
TRIM56-201ENST00000306085 ACP5P13686 325 aa12.9□□□□□ -0.34
TRIM56-201ENST00000306085 DGKQP52824 942 aa12.9□□□□□ -0.34
TRIM56-201ENST00000306085 ID2Q02363 134 aa12.9□□□□□ -0.34
TRIM56-201ENST00000306085 TTLL10Q6ZVT0 673 aa12.9□□□□□ -0.34
TRIM56-201ENST00000306085 YTHDF1Q9BYJ9 559 aaKnown RBP12.9□□□□□ -0.34
TRIM56-201ENST00000306085 CERS4Q9HA82 394 aa12.9□□□□□ -0.34
TRIM56-201ENST00000306085 DVL1O14640 695 aa12.9□□□□□ -0.35
TRIM56-201ENST00000306085 SLC7A4O43246 635 aa12.9□□□□□ -0.35
TRIM56-201ENST00000306085 TACR2P21452 398 aa12.9□□□□□ -0.35
TRIM56-201ENST00000306085 NRIP1P48552 1158 aa12.9□□□□□ -0.35
TRIM56-201ENST00000306085 DVL1P1P54792 670 aaPredicted RBP12.9□□□□□ -0.35
TRIM56-201ENST00000306085 PCBP1Q15365 356 aaKnown RBP eCLIP12.9□□□□□ -0.35
TRIM56-201ENST00000306085 GTF2H5Q6ZYL4 71 aa12.9□□□□□ -0.35
TRIM56-201ENST00000306085 KCTD20Q7Z5Y7 419 aa12.9□□□□□ -0.35
TRIM56-201ENST00000306085 TRAM1L1Q8N609 369 aa12.9□□□□□ -0.35
TRIM56-201ENST00000306085 RIOX1Q9H6W3 641 aa12.9□□□□□ -0.35
TRIM56-201ENST00000306085 FKRPQ9H9S5 495 aa12.9□□□□□ -0.35
TRIM56-201ENST00000306085 SOCS2O14508 198 aa12.89□□□□□ -0.35
TRIM56-201ENST00000306085 SLC31A2O15432 143 aa12.89□□□□□ -0.35
TRIM56-201ENST00000306085 UCHL1P09936 223 aa12.89□□□□□ -0.35
TRIM56-201ENST00000306085 FCER1GP30273 86 aa12.89□□□□□ -0.35
TRIM56-201ENST00000306085 INAVAQ3KP66 663 aa12.89□□□□□ -0.35
TRIM56-201ENST00000306085 GLIS3Q8NEA6 775 aa12.89□□□□□ -0.35
TRIM56-201ENST00000306085 CNOT9Q92600 299 aaKnown RBP12.89□□□□□ -0.35
TRIM56-201ENST00000306085 KLK3P07288 261 aaPredicted RBP12.89□□□□□ -0.35
TRIM56-201ENST00000306085 GJB1P08034 283 aa12.89□□□□□ -0.35
TRIM56-201ENST00000306085 TMEM126BQ8IUX1 230 aa12.89□□□□□ -0.35
TRIM56-201ENST00000306085 ART1P52961 327 aa12.89□□□□□ -0.35
TRIM56-201ENST00000306085 FAM199XQ6PEV8 388 aaPredicted RBP12.89□□□□□ -0.35
TRIM56-201ENST00000306085 ENPP7Q6UWV6 458 aa12.89□□□□□ -0.35
TRIM56-201ENST00000306085 SERPINA12Q8IW75 414 aa12.89□□□□□ -0.35
TRIM56-201ENST00000306085 PRICKLE3O43900 615 aaPredicted RBP12.89□□□□□ -0.35
TRIM56-201ENST00000306085 ZNF780AO75290 641 aaPredicted RBP12.89□□□□□ -0.35
TRIM56-201ENST00000306085 PBX2P40425 430 aa12.89□□□□□ -0.35
TRIM56-201ENST00000306085 CDK6Q00534 326 aa12.89□□□□□ -0.35
TRIM56-201ENST00000306085 SMYD5Q6GMV2 418 aa12.89□□□□□ -0.35
TRIM56-201ENST00000306085 SLC22A18Q96BI1 424 aa12.89□□□□□ -0.35
TRIM56-201ENST00000306085 RADILQ96JH8 1075 aa12.89□□□□□ -0.35
TRIM56-201ENST00000306085 MANSC4A6NHS7 340 aaPredicted RBP12.89□□□□□ -0.35
TRIM56-201ENST00000306085 PRKCAP17252 672 aa12.89□□□□□ -0.35
TRIM56-201ENST00000306085 OR4F3Q6IEY1 312 aa12.89□□□□□ -0.35
TRIM56-201ENST00000306085 NIPA1Q7RTP0 329 aa12.89□□□□□ -0.35
TRIM56-201ENST00000306085 IL17RCQ8NAC3 791 aa12.89□□□□□ -0.35
TRIM56-201ENST00000306085 GNPDA2Q8TDQ7 276 aa12.89□□□□□ -0.35
TRIM56-201ENST00000306085 CHTF18Q8WVB6 975 aa12.89□□□□□ -0.35
TRIM56-201ENST00000306085 MSI2Q96DH6 328 aaKnown RBP12.89□□□□□ -0.35
TRIM56-201ENST00000306085 RPS10-NUDT3A0A1W2PQS6 291 aa12.89□□□□□ -0.35
TRIM56-201ENST00000306085 RFPL2O75678 378 aa12.89□□□□□ -0.35
TRIM56-201ENST00000306085 RPS10P46783 165 aaKnown RBP12.89□□□□□ -0.35
TRIM56-201ENST00000306085 OR51Q1Q8NH59 317 aa12.89□□□□□ -0.35
TRIM56-201ENST00000306085 AKTIPQ9H8T0 292 aa12.89□□□□□ -0.35
TRIM56-201ENST00000306085 SNAPINO95295 136 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms