RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 OR51A7Q8NH64 312 aa13.36□□□□□ -0.27
PRKCB-201ENST00000303531 ZC3H10Q96K80 434 aaKnown RBP13.36□□□□□ -0.27
PRKCB-201ENST00000303531 C2orf74A8MZ97 194 aa13.36□□□□□ -0.27
PRKCB-201ENST00000303531 C11orf98E9PRG8 122 aa13.36□□□□□ -0.27
PRKCB-201ENST00000303531 EMC8O43402 210 aa13.36□□□□□ -0.27
PRKCB-201ENST00000303531 FOXD2O60548 495 aaPredicted RBP13.36□□□□□ -0.27
PRKCB-201ENST00000303531 TRAPPC6AO75865 159 aa13.36□□□□□ -0.27
PRKCB-201ENST00000303531 CLDN8P56748 225 aa13.36□□□□□ -0.27
PRKCB-201ENST00000303531 PON2Q15165 354 aa13.36□□□□□ -0.27
PRKCB-201ENST00000303531 ZNF181Q2M3W8 571 aa13.36□□□□□ -0.27
PRKCB-201ENST00000303531 CASTOR1Q8WTX7 329 aa13.36□□□□□ -0.27
PRKCB-201ENST00000303531 L3HYPDHQ96EM0 354 aa13.36□□□□□ -0.27
PRKCB-201ENST00000303531 RNF38Q9H0F5 515 aa13.36□□□□□ -0.27
PRKCB-201ENST00000303531 PRTFDC1Q9NRG1 225 aa13.36□□□□□ -0.27
PRKCB-201ENST00000303531 RDH8Q9NYR8 311 aa13.36□□□□□ -0.27
PRKCB-201ENST00000303531 ACSL6Q9UKU0 697 aa13.36□□□□□ -0.27
PRKCB-201ENST00000303531 FEZF1A0PJY2 475 aa13.36□□□□□ -0.27
PRKCB-201ENST00000303531 HTR3EA5X5Y0 456 aa13.36□□□□□ -0.27
PRKCB-201ENST00000303531 SPARCP09486 303 aa13.36□□□□□ -0.27
PRKCB-201ENST00000303531 RHCEP18577 417 aa13.36□□□□□ -0.27
PRKCB-201ENST00000303531 CD97P48960 835 aa13.36□□□□□ -0.27
PRKCB-201ENST00000303531 HK3P52790 923 aa13.36□□□□□ -0.27
PRKCB-201ENST00000303531 RPA4Q13156 261 aa13.36□□□□□ -0.27
PRKCB-201ENST00000303531 CLCA4Q14CN2 919 aa13.36□□□□□ -0.27
PRKCB-201ENST00000303531 UAP1L1Q3KQV9 507 aa13.36□□□□□ -0.27
PRKCB-201ENST00000303531 C1orf94Q6P1W5 598 aa13.36□□□□□ -0.27
PRKCB-201ENST00000303531 HUS1BQ8NHY5 278 aa13.36□□□□□ -0.27
PRKCB-201ENST00000303531 MAPK15Q8TD08 544 aa13.36□□□□□ -0.27
PRKCB-201ENST00000303531 CREB3L1Q96BA8 519 aa13.36□□□□□ -0.27
PRKCB-201ENST00000303531 LRIG1Q96JA1 1093 aa13.36□□□□□ -0.27
PRKCB-201ENST00000303531 MGLLQ99685 303 aa13.36□□□□□ -0.27
PRKCB-201ENST00000303531 MYH7P12883 1935 aa13.36□□□□□ -0.27
PRKCB-201ENST00000303531 RGPD8O14715 1765 aaPredicted RBP13.36□□□□□ -0.27
PRKCB-201ENST00000303531 TTC34A8MYJ7 566 aa13.36□□□□□ -0.27
PRKCB-201ENST00000303531 H0YJX3 145 aa13.36□□□□□ -0.27
PRKCB-201ENST00000303531 SCAMP2O15127 329 aaKnown RBP13.36□□□□□ -0.27
PRKCB-201ENST00000303531 GABBR2O75899 941 aa13.36□□□□□ -0.27
PRKCB-201ENST00000303531 OR7A10O76100 309 aa13.36□□□□□ -0.27
PRKCB-201ENST00000303531 PABPC4LP0CB38 370 aaKnown RBP13.36□□□□□ -0.27
PRKCB-201ENST00000303531 PRSS56P0CW18 603 aa13.36□□□□□ -0.27
PRKCB-201ENST00000303531 GGT1P19440 569 aa13.36□□□□□ -0.27
PRKCB-201ENST00000303531 PVALBP20472 110 aaPredicted RBP13.36□□□□□ -0.27
PRKCB-201ENST00000303531 C22orf42Q6IC83 251 aa13.36□□□□□ -0.27
PRKCB-201ENST00000303531 CHRDL2Q6WN34 429 aa13.36□□□□□ -0.27
PRKCB-201ENST00000303531 C6orf120Q7Z4R8 191 aa13.36□□□□□ -0.27
PRKCB-201ENST00000303531 WDR37Q9Y2I8 494 aa13.36□□□□□ -0.27
PRKCB-201ENST00000303531 PHRF1Q9P1Y6 1649 aaKnown RBP13.36□□□□□ -0.27
PRKCB-201ENST00000303531 KIAA0513O60268 411 aa13.35□□□□□ -0.27
PRKCB-201ENST00000303531 FHP07954 510 aa13.35□□□□□ -0.27
PRKCB-201ENST00000303531 RPS21P63220 83 aaKnown RBP13.35□□□□□ -0.27
PRKCB-201ENST00000303531 FAM214AQ32MH5 1076 aa13.35□□□□□ -0.27
PRKCB-201ENST00000303531 ITPRIPL2Q3MIP1 535 aa13.35□□□□□ -0.27
PRKCB-201ENST00000303531 P4HA3Q7Z4N8 544 aa13.35□□□□□ -0.27
PRKCB-201ENST00000303531 GALNT10Q86SR1 603 aa13.35□□□□□ -0.27
PRKCB-201ENST00000303531 ISCA2Q86U28 154 aa13.35□□□□□ -0.27
PRKCB-201ENST00000303531 SLC44A3Q8N4M1 653 aa13.35□□□□□ -0.27
PRKCB-201ENST00000303531 P2RY13Q9BPV8 354 aa13.35□□□□□ -0.27
PRKCB-201ENST00000303531 FBXL3Q9UKT7 428 aa13.35□□□□□ -0.27
PRKCB-201ENST00000303531 VNN2O95498 520 aa13.35□□□□□ -0.27
PRKCB-201ENST00000303531 KLK3P07288 261 aaPredicted RBP13.35□□□□□ -0.27
PRKCB-201ENST00000303531 MAGEA8P43361 318 aa13.35□□□□□ -0.27
PRKCB-201ENST00000303531 OR8J1Q8NGP2 316 aa13.35□□□□□ -0.27
PRKCB-201ENST00000303531 SUN3Q8TAQ9 357 aa13.35□□□□□ -0.27
PRKCB-201ENST00000303531 GATAD2BQ8WXI9 593 aa13.35□□□□□ -0.27
PRKCB-201ENST00000303531 THRSPQ92748 146 aa13.35□□□□□ -0.27
PRKCB-201ENST00000303531 RTP4Q96DX8 246 aa13.35□□□□□ -0.27
PRKCB-201ENST00000303531 ZNF700Q9H0M5 742 aa13.35□□□□□ -0.27
PRKCB-201ENST00000303531 ABCD2Q9UBJ2 740 aa13.35□□□□□ -0.27
PRKCB-201ENST00000303531 PCTPQ9UKL6 214 aa13.35□□□□□ -0.27
PRKCB-201ENST00000303531 A0A1W2PP55 124 aa13.35□□□□□ -0.27
PRKCB-201ENST00000303531 A0A1W2PPK0 400 aa13.35□□□□□ -0.27
PRKCB-201ENST00000303531 EEF1E1O43324 174 aaKnown RBP13.35□□□□□ -0.27
PRKCB-201ENST00000303531 PFKLP17858 780 aa13.35□□□□□ -0.27
PRKCB-201ENST00000303531 NAA10P41227 235 aaPredicted RBP13.35□□□□□ -0.27
PRKCB-201ENST00000303531 HSD17B12Q53GQ0 312 aa13.35□□□□□ -0.27
PRKCB-201ENST00000303531 LCN8Q6JVE9 175 aa13.35□□□□□ -0.27
PRKCB-201ENST00000303531 AKAP1Q92667 903 aaKnown RBP eCLIP13.35□□□□□ -0.27
PRKCB-201ENST00000303531 GMEB2Q9UKD1 530 aa13.35□□□□□ -0.27
PRKCB-201ENST00000303531 A0A1W2PPL8 197 aa13.35□□□□□ -0.27
PRKCB-201ENST00000303531 G3V2L1 256 aa13.35□□□□□ -0.27
PRKCB-201ENST00000303531 ADH7P40394 386 aa13.35□□□□□ -0.27
PRKCB-201ENST00000303531 DEFB134Q4QY38 66 aa13.35□□□□□ -0.27
PRKCB-201ENST00000303531 CEACAM19Q7Z692 300 aa13.35□□□□□ -0.27
PRKCB-201ENST00000303531 CHCHD4Q8N4Q1 142 aa13.35□□□□□ -0.27
PRKCB-201ENST00000303531 ZNF565Q8N9K5 539 aa13.35□□□□□ -0.27
PRKCB-201ENST00000303531 GOLM1Q8NBJ4 401 aa13.35□□□□□ -0.27
PRKCB-201ENST00000303531 LSM14AQ8ND56 463 aaKnown RBP13.35□□□□□ -0.27
PRKCB-201ENST00000303531 FUBP1Q96AE4 644 aaKnown RBP13.35□□□□□ -0.27
PRKCB-201ENST00000303531 FAM83CQ9BQN1 747 aa13.35□□□□□ -0.27
PRKCB-201ENST00000303531 PHLPP1O60346 1717 aa13.35□□□□□ -0.27
PRKCB-201ENST00000303531 CSTAP01040 98 aa13.35□□□□□ -0.27
PRKCB-201ENST00000303531 HOXA11P31270 313 aaPredicted RBP13.35□□□□□ -0.27
PRKCB-201ENST00000303531 HMGCLP35914 325 aa13.35□□□□□ -0.27
PRKCB-201ENST00000303531 GCGRP47871 477 aa13.35□□□□□ -0.27
PRKCB-201ENST00000303531 ASRGL1Q7L266 308 aa13.35□□□□□ -0.27
PRKCB-201ENST00000303531 KLHDC7BQ96G42 594 aa13.35□□□□□ -0.27
PRKCB-201ENST00000303531 G6PC3Q9BUM1 346 aa13.35□□□□□ -0.27
PRKCB-201ENST00000303531 SLC2A4RGQ9NR83 387 aa13.35□□□□□ -0.27
PRKCB-201ENST00000303531 IGSF5Q9NSI5 407 aa13.35□□□□□ -0.27
PRKCB-201ENST00000303531 GSKIPQ9P0R6 139 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms