RNA–Protein interactions for RNA: ENST00000303395.8

SCN1A-201, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-201ENST00000303395 NME6O75414 186 aaPredicted RBP5.05□□□□□ -1.6
SCN1A-201ENST00000303395 AMHP03971 560 aa5.05□□□□□ -1.6
SCN1A-201ENST00000303395 CRHBPP24387 322 aa5.05□□□□□ -1.6
SCN1A-201ENST00000303395 CEBPAP49715 358 aaPredicted RBP5.05□□□□□ -1.6
SCN1A-201ENST00000303395 CLCN7P51798 805 aa5.05□□□□□ -1.6
SCN1A-201ENST00000303395 HK3P52790 923 aa5.05□□□□□ -1.6
SCN1A-201ENST00000303395 HERV-K104P61576 105 aa5.05□□□□□ -1.6
SCN1A-201ENST00000303395 RNF212Q495C1 297 aa5.05□□□□□ -1.6
SCN1A-201ENST00000303395 CPZQ66K79 652 aa5.05□□□□□ -1.6
SCN1A-201ENST00000303395 PIGZQ86VD9 579 aa5.05□□□□□ -1.6
SCN1A-201ENST00000303395 CMIPQ8IY22 773 aa5.05□□□□□ -1.6
SCN1A-201ENST00000303395 STT3BQ8TCJ2 826 aa5.05□□□□□ -1.6
SCN1A-201ENST00000303395 CITED4Q96RK1 184 aa5.05□□□□□ -1.6
SCN1A-201ENST00000303395 PRRT1Q99946 306 aa5.05□□□□□ -1.6
SCN1A-201ENST00000303395 TPK1Q9H3S4 243 aa5.05□□□□□ -1.6
SCN1A-201ENST00000303395 MARCH2Q9P0N8 246 aa5.05□□□□□ -1.6
SCN1A-201ENST00000303395 RGPD5Q99666 1765 aa5.05□□□□□ -1.6
SCN1A-201ENST00000303395 TRIOBPQ9H2D6 2365 aa5.05□□□□□ -1.6
SCN1A-201ENST00000303395 SCN7AQ01118 1682 aa5.05□□□□□ -1.6
SCN1A-201ENST00000303395 TMEM129A0AVI4 362 aa5.05□□□□□ -1.6
SCN1A-201ENST00000303395 GRIN3BO60391 1043 aa5.05□□□□□ -1.6
SCN1A-201ENST00000303395 SLC2A1P11166 492 aa5.05□□□□□ -1.6
SCN1A-201ENST00000303395 SLC26A5P58743 744 aa5.05□□□□□ -1.6
SCN1A-201ENST00000303395 GPX6P59796 221 aa5.05□□□□□ -1.6
SCN1A-201ENST00000303395 TLE2Q04725 743 aa5.05□□□□□ -1.6
SCN1A-201ENST00000303395 DYRK1AQ13627 763 aa5.05□□□□□ -1.6
SCN1A-201ENST00000303395 UBXN2BQ14CS0 331 aa5.05□□□□□ -1.6
SCN1A-201ENST00000303395 LAPTM4AQ15012 233 aa5.05□□□□□ -1.6
SCN1A-201ENST00000303395 TECRLQ5HYJ1 363 aa5.05□□□□□ -1.6
SCN1A-201ENST00000303395 ATAD3CQ5T2N8 411 aa5.05□□□□□ -1.6
SCN1A-201ENST00000303395 PDSS1Q5T2R2 415 aa5.05□□□□□ -1.6
SCN1A-201ENST00000303395 FAM205BPQ63HN1 556 aa5.05□□□□□ -1.6
SCN1A-201ENST00000303395 TPGS2Q68CL5 300 aa5.05□□□□□ -1.6
SCN1A-201ENST00000303395 SLC27A4Q6P1M0 643 aa5.05□□□□□ -1.6
SCN1A-201ENST00000303395 ZNF730Q6ZMV8 503 aa5.05□□□□□ -1.6
SCN1A-201ENST00000303395 PXKQ7Z7A4 578 aa5.05□□□□□ -1.6
SCN1A-201ENST00000303395 ARHGAP12Q8IWW6 846 aa5.05□□□□□ -1.6
SCN1A-201ENST00000303395 SLC34A3Q8N130 599 aa5.05□□□□□ -1.6
SCN1A-201ENST00000303395 PTERQ96BW5 349 aa5.05□□□□□ -1.6
SCN1A-201ENST00000303395 SAMD11Q96NU1 681 aa5.05□□□□□ -1.6
SCN1A-201ENST00000303395 NECTIN4Q96NY8 510 aa5.05□□□□□ -1.6
SCN1A-201ENST00000303395 CDK15Q96Q40 435 aa5.05□□□□□ -1.6
SCN1A-201ENST00000303395 SLC2A13Q96QE2 648 aa5.05□□□□□ -1.6
SCN1A-201ENST00000303395 ZNF649Q9BS31 505 aa5.05□□□□□ -1.6
SCN1A-201ENST00000303395 GPR88Q9GZN0 384 aa5.05□□□□□ -1.6
SCN1A-201ENST00000303395 LIN7CQ9NUP9 197 aaKnown RBP5.05□□□□□ -1.6
SCN1A-201ENST00000303395 ASH2LQ9UBL3 628 aa5.05□□□□□ -1.6
SCN1A-201ENST00000303395 MGAT4CQ9UBM8 478 aa5.05□□□□□ -1.6
SCN1A-201ENST00000303395 ACSL6Q9UKU0 697 aa5.05□□□□□ -1.6
SCN1A-201ENST00000303395 NUP214P35658 2090 aaPredicted RBP5.05□□□□□ -1.6
SCN1A-201ENST00000303395 CBX4O00257 560 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 DLX3O60479 287 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 MPSTP25325 297 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 CSNK1DP48730 415 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 BNIP3Q12983 259 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 TUSC3Q13454 348 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 SFT2D3Q587I9 215 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 CELF3Q5SZQ8 465 aaKnown RBP5.04□□□□□ -1.6
SCN1A-201ENST00000303395 HAGHLQ6PII5 290 aaPredicted RBP5.04□□□□□ -1.6
SCN1A-201ENST00000303395 CEP97Q8IW35 865 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 EFCAB3Q8N7B9 438 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 CHDHQ8NE62 594 aaPredicted RBP5.04□□□□□ -1.6
SCN1A-201ENST00000303395 OR4C6Q8NH72 309 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 FBXO30Q8TB52 745 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 MALSU1Q96EH3 234 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 NPY6RQ99463 290 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 AARSD1Q9BTE6 412 aaKnown RBP5.04□□□□□ -1.6
SCN1A-201ENST00000303395 RNF38Q9H0F5 515 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 TUBG2Q9NRH3 451 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 PARPBPQ9NWS1 579 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 FAM118AQ9NWS6 357 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 CFAP97Q9P2B7 532 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 INTS6Q9UL03 887 aaKnown RBP5.04□□□□□ -1.6
SCN1A-201ENST00000303395 TMEM98Q9Y2Y6 226 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 PEX12O00623 359 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 MID1O15344 667 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 TSPAN12O95859 305 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 T-ENOLP0DO92 83 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 MYCLP1P12525 358 aaPredicted RBP5.04□□□□□ -1.6
SCN1A-201ENST00000303395 THPOP40225 353 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 RPS3AP61247 264 aaKnown RBP5.04□□□□□ -1.6
SCN1A-201ENST00000303395 FRG2Q64ET8 278 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 PLAG1Q6DJT9 500 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 INTS5Q6P9B9 1019 aaKnown RBP5.04□□□□□ -1.6
SCN1A-201ENST00000303395 GJB7Q6PEY0 223 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 PRICKLE2Q7Z3G6 844 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 ACOT1Q86TX2 421 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 LGI4Q8N135 537 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 ATAD1Q8NBU5 361 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 HERVK_113Q902F9 699 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 HSPA12BQ96MM6 686 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 FRG2BQ96QU4 278 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 KXD1Q9BQD3 176 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 YIPF4Q9BSR8 244 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 ZNF416Q9BWM5 594 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 RNF32Q9H0A6 362 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 IGFLR1Q9H665 355 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 NUDT15Q9NV35 164 aa5.04□□□□□ -1.6
SCN1A-201ENST00000303395 AGO1Q9UL18 857 aaKnown RBP5.04□□□□□ -1.6
SCN1A-201ENST00000303395 HSPB11Q9Y547 144 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms