RNA–Protein interactions for RNA: ENST00000302445.7

KARS-201, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best) BASIC

Gene KARS, Length 2,005 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-201ENST00000302445 OPN1SWP03999 348 aa13.2□□□□□ -0.3
KARS-201ENST00000302445 TNFRSF1BP20333 461 aa13.2□□□□□ -0.3
KARS-201ENST00000302445 GALP22466 123 aa13.2□□□□□ -0.3
KARS-201ENST00000302445 TWF1Q12792 350 aa13.2□□□□□ -0.3
KARS-201ENST00000302445 GRK1Q15835 563 aa13.2□□□□□ -0.3
KARS-201ENST00000302445 FAM214AQ32MH5 1076 aa13.2□□□□□ -0.3
KARS-201ENST00000302445 ARMC12Q5T9G4 340 aa13.2□□□□□ -0.3
KARS-201ENST00000302445 NDUFAF5Q5TEU4 345 aa13.2□□□□□ -0.3
KARS-201ENST00000302445 GPR139Q6DWJ6 353 aa13.2□□□□□ -0.3
KARS-201ENST00000302445 RGMBQ6NW40 437 aa13.2□□□□□ -0.3
KARS-201ENST00000302445 CDH24Q86UP0 819 aa13.2□□□□□ -0.3
KARS-201ENST00000302445 ADGRG3Q86Y34 549 aa13.2□□□□□ -0.3
KARS-201ENST00000302445 GPC2Q8N158 579 aa13.2□□□□□ -0.3
KARS-201ENST00000302445 CFAP52Q8N1V2 620 aa13.2□□□□□ -0.3
KARS-201ENST00000302445 CLDN19Q8N6F1 224 aa13.2□□□□□ -0.3
KARS-201ENST00000302445 KLHDC9Q8NEP7 349 aa13.2□□□□□ -0.3
KARS-201ENST00000302445 ZNF431Q8TF32 576 aaPredicted RBP13.2□□□□□ -0.3
KARS-201ENST00000302445 HASPINQ8TF76 798 aa13.2□□□□□ -0.3
KARS-201ENST00000302445 UFD1Q92890 307 aa13.2□□□□□ -0.3
KARS-201ENST00000302445 IL4I1Q96RQ9 567 aa13.2□□□□□ -0.3
KARS-201ENST00000302445 PRR14Q9BWN1 585 aa13.2□□□□□ -0.3
KARS-201ENST00000302445 ZFYVE1Q9HBF4 777 aa13.2□□□□□ -0.3
KARS-201ENST00000302445 FGF20Q9NP95 211 aaPredicted RBP13.2□□□□□ -0.3
KARS-201ENST00000302445 C12orf4Q9NQ89 552 aa13.2□□□□□ -0.3
KARS-201ENST00000302445 GPATCH2Q9NW75 528 aa13.2□□□□□ -0.3
KARS-201ENST00000302445 DNAJC27Q9NZQ0 273 aa13.2□□□□□ -0.3
KARS-201ENST00000302445 GULP1Q9UBP9 304 aa13.2□□□□□ -0.3
KARS-201ENST00000302445 LHX3Q9UBR4 397 aa13.2□□□□□ -0.3
KARS-201ENST00000302445 POLHQ9Y253 713 aa13.2□□□□□ -0.3
KARS-201ENST00000302445 Q9Y3F1 56 aa13.2□□□□□ -0.3
KARS-201ENST00000302445 FKBP7Q9Y680 259 aa13.2□□□□□ -0.3
KARS-201ENST00000302445 CLCA3PQ9Y6N3 262 aa13.2□□□□□ -0.3
KARS-201ENST00000302445 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.19□□□□□ -0.3
KARS-201ENST00000302445 GLYATL1P3A0A0U1RQE8 302 aa13.19□□□□□ -0.3
KARS-201ENST00000302445 I3L521 148 aa13.19□□□□□ -0.3
KARS-201ENST00000302445 CHP2O43745 196 aa13.19□□□□□ -0.3
KARS-201ENST00000302445 SLC34A2O95436 690 aa13.19□□□□□ -0.3
KARS-201ENST00000302445 DHFRP00374 187 aa13.19□□□□□ -0.3
KARS-201ENST00000302445 OR4Q2P0C623 313 aa13.19□□□□□ -0.3
KARS-201ENST00000302445 CLEC2LP0C7M8 214 aa13.19□□□□□ -0.3
KARS-201ENST00000302445 POU2F1P14859 743 aa13.19□□□□□ -0.3
KARS-201ENST00000302445 SLC6A1P30531 599 aa13.19□□□□□ -0.3
KARS-201ENST00000302445 PNLIPRP1P54315 467 aa13.19□□□□□ -0.3
KARS-201ENST00000302445 CHIT1Q13231 466 aa13.19□□□□□ -0.3
KARS-201ENST00000302445 ZNF177Q13360 481 aaPredicted RBP13.19□□□□□ -0.3
KARS-201ENST00000302445 NDUFA9Q16795 377 aa13.19□□□□□ -0.3
KARS-201ENST00000302445 CD276Q5ZPR3 534 aa13.19□□□□□ -0.3
KARS-201ENST00000302445 KLHDC8AQ8IYD2 350 aa13.19□□□□□ -0.3
KARS-201ENST00000302445 OR52I1Q8NGK6 324 aa13.19□□□□□ -0.3
KARS-201ENST00000302445 NFKBIDQ8NI38 313 aa13.19□□□□□ -0.3
KARS-201ENST00000302445 SORCS2Q96PQ0 1159 aa13.19□□□□□ -0.3
KARS-201ENST00000302445 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.19□□□□□ -0.3
KARS-201ENST00000302445 RC3H2Q9HBD1 1191 aaKnown RBP13.19□□□□□ -0.3
KARS-201ENST00000302445 C11orf16Q9NQ32 467 aa13.19□□□□□ -0.3
KARS-201ENST00000302445 CUEDC1Q9NWM3 386 aaPredicted RBP13.19□□□□□ -0.3
KARS-201ENST00000302445 ZSCAN32Q9NX65 697 aa13.19□□□□□ -0.3
KARS-201ENST00000302445 NCKAP1Q9Y2A7 1128 aa13.19□□□□□ -0.3
KARS-201ENST00000302445 PCDHB7Q9Y5E2 793 aa13.19□□□□□ -0.3
KARS-201ENST00000302445 PLXNB3Q9ULL4 1909 aa13.19□□□□□ -0.3
KARS-201ENST00000302445 PRAMEF33A0A0G2JMD5 474 aa13.18□□□□□ -0.3
KARS-201ENST00000302445 J3KTA2 159 aa13.18□□□□□ -0.3
KARS-201ENST00000302445 WWP2O00308 870 aa13.18□□□□□ -0.3
KARS-201ENST00000302445 FABP7O15540 132 aa13.18□□□□□ -0.3
KARS-201ENST00000302445 TSPAN3O60637 253 aa13.18□□□□□ -0.3
KARS-201ENST00000302445 PRAMEF10O60809 474 aa13.18□□□□□ -0.3
KARS-201ENST00000302445 OR56A5P0C7T3 313 aa13.18□□□□□ -0.3
KARS-201ENST00000302445 ANXA3P12429 323 aa13.18□□□□□ -0.3
KARS-201ENST00000302445 ETFAP13804 333 aa13.18□□□□□ -0.3
KARS-201ENST00000302445 SPAM1P38567 509 aa13.18□□□□□ -0.3
KARS-201ENST00000302445 GPR15P49685 360 aa13.18□□□□□ -0.3
KARS-201ENST00000302445 XKP51811 444 aa13.18□□□□□ -0.3
KARS-201ENST00000302445 SMIM11AP58511 58 aa13.18□□□□□ -0.3
KARS-201ENST00000302445 ARF5P84085 180 aa13.18□□□□□ -0.3
KARS-201ENST00000302445 RAB40BQ12829 278 aa13.18□□□□□ -0.3
KARS-201ENST00000302445 TAF10Q12962 218 aa13.18□□□□□ -0.3
KARS-201ENST00000302445 IL18Q14116 193 aa13.18□□□□□ -0.3
KARS-201ENST00000302445 ZXDCQ2QGD7 858 aaPredicted RBP13.18□□□□□ -0.3
KARS-201ENST00000302445 SDHAF4Q5VUM1 108 aa13.18□□□□□ -0.3
KARS-201ENST00000302445 CD300LDQ6UXZ3 194 aa13.18□□□□□ -0.3
KARS-201ENST00000302445 GPR142Q7Z601 462 aa13.18□□□□□ -0.3
KARS-201ENST00000302445 FAM217AQ8IXS0 508 aa13.18□□□□□ -0.3
KARS-201ENST00000302445 OR52P1PQ8NH57 321 aa13.18□□□□□ -0.3
KARS-201ENST00000302445 ASB11Q8WXH4 323 aa13.18□□□□□ -0.3
KARS-201ENST00000302445 B3GNT4Q9C0J1 378 aa13.18□□□□□ -0.3
KARS-201ENST00000302445 MED28Q9H204 178 aa13.18□□□□□ -0.3
KARS-201ENST00000302445 PPA2Q9H2U2 334 aa13.18□□□□□ -0.3
KARS-201ENST00000302445 SLC28A3Q9HAS3 691 aa13.18□□□□□ -0.3
KARS-201ENST00000302445 GALNT9Q9HCQ5 603 aa13.18□□□□□ -0.3
KARS-201ENST00000302445 IL26Q9NPH9 171 aa13.18□□□□□ -0.3
KARS-201ENST00000302445 B3GAT2Q9NPZ5 323 aa13.18□□□□□ -0.3
KARS-201ENST00000302445 EXOSC1Q9Y3B2 195 aaKnown RBP13.18□□□□□ -0.3
KARS-201ENST00000302445 PCDHB9Q9Y5E1 797 aa13.18□□□□□ -0.3
KARS-201ENST00000302445 SPIN1Q9Y657 262 aaPredicted RBP13.18□□□□□ -0.3
KARS-201ENST00000302445 CSNK1G3Q9Y6M4 447 aa13.18□□□□□ -0.3
KARS-201ENST00000302445 A0A0U1RQF3 1178 aa13.18□□□□□ -0.3
KARS-201ENST00000302445 A0A1B0GVI7 797 aa13.18□□□□□ -0.3
KARS-201ENST00000302445 RPS10-NUDT3A0A1W2PQS6 291 aa13.18□□□□□ -0.3
KARS-201ENST00000302445 TRBC2A0A5B9 178 aa13.18□□□□□ -0.3
KARS-201ENST00000302445 MGAT4DA6NG13 374 aa13.18□□□□□ -0.3
KARS-201ENST00000302445 HEPACAM2A8MVW5 462 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms