RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 PDXPQ96GD0 296 aa6.35□□□□□ -1.39
TMC1-201ENST00000297784 ZNF514Q96K75 400 aaPredicted RBP6.35□□□□□ -1.39
TMC1-201ENST00000297784 GPR174Q9BXC1 333 aa6.35□□□□□ -1.39
TMC1-201ENST00000297784 CD244Q9BZW8 370 aa6.35□□□□□ -1.39
TMC1-201ENST00000297784 MIR1-1HGQ9H1L0 117 aa6.35□□□□□ -1.39
TMC1-201ENST00000297784 NIPAL2Q9H841 368 aa6.35□□□□□ -1.39
TMC1-201ENST00000297784 ACTR8Q9H981 624 aa6.35□□□□□ -1.39
TMC1-201ENST00000297784 TOR4AQ9NXH8 423 aa6.35□□□□□ -1.39
TMC1-201ENST00000297784 NUDT4Q9NZJ9 180 aa6.35□□□□□ -1.39
TMC1-201ENST00000297784 SNX6Q9UNH7 406 aa6.35□□□□□ -1.39
TMC1-201ENST00000297784 INVSQ9Y283 1065 aa6.35□□□□□ -1.39
TMC1-201ENST00000297784 AP3M1Q9Y2T2 418 aa6.35□□□□□ -1.39
TMC1-201ENST00000297784 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.35□□□□□ -1.39
TMC1-201ENST00000297784 PTGDR2Q9Y5Y4 395 aa6.35□□□□□ -1.39
TMC1-201ENST00000297784 TNRC6BQ9UPQ9 1833 aaKnown RBP6.34□□□□□ -1.39
TMC1-201ENST00000297784 M0R082 166 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 AP3D1O14617 1153 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 SEC22BO75396 215 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 SCELO95171 688 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 EML2O95834 649 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 ALPPP05187 535 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 RPLP0P05388 317 aaKnown RBP6.34□□□□□ -1.39
TMC1-201ENST00000297784 C8GP07360 202 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 MAGP20916 626 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 LIPAP38571 399 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 SLC6A12P48065 614 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 RFX2P48378 723 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 DIO3P55073 304 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 MAD2L1BPQ15013 274 aaPredicted RBP6.34□□□□□ -1.39
TMC1-201ENST00000297784 GOLGA7Q7Z5G4 137 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 NRARPQ7Z6K4 114 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 TMEM179BQ7Z7N9 219 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 SYVN1Q86TM6 617 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 LRRTM4Q86VH4 590 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 AMZ2Q86W34 360 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 HS3ST5Q8IZT8 346 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 FBXL6Q8N531 539 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 DEFB119Q8N690 84 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 ZNF540Q8NDQ6 660 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 TMEM159Q96B96 161 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 TEX37Q96LM6 180 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 DMRTB1Q96MA1 342 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 ZCCHC2Q9C0B9 1178 aaKnown RBP6.34□□□□□ -1.39
TMC1-201ENST00000297784 DPEP2Q9H4A9 486 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 MID1IP1Q9NPA3 183 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 B3GNT2Q9NY97 397 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 SLAMF8Q9P0V8 285 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 GIMAP2Q9UG22 337 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 AUP1Q9Y679 476 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 SNRNP200O75643 2136 aaKnown RBP6.34□□□□□ -1.39
TMC1-201ENST00000297784 PRSS38A1L453 326 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 LRRC72A6NJI9 287 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 GPR89AB7ZAQ6 455 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 H3BM21 787 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 GNGT2O14610 69 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 SLC16A5O15375 505 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 PDPK1O15530 556 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 SLC16A8O95907 504 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 RETP07949 1114 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 MSL3P1P0C860 447 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 GPR89BP0CG08 455 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 IL32P24001 234 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 BDKRB1P46663 353 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 ERVPABLB-1P60509 514 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 PROX2Q3B8N5 592 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 TJAP1Q5JTD0 557 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 NDUFAF5Q5TEU4 345 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 MLIPQ5VWP3 458 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 KIAA0895LQ68EN5 471 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 ANKRD34AQ69YU3 496 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 CYP20A1Q6UW02 462 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 CREB3L2Q70SY1 520 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 ABI3BPQ7Z7G0 1075 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 TSPYL5Q86VY4 417 aaPredicted RBP6.34□□□□□ -1.39
TMC1-201ENST00000297784 LRRC56Q8IYG6 542 aaPredicted RBP6.34□□□□□ -1.39
TMC1-201ENST00000297784 DENND6BQ8NEG7 585 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 CCL4L1Q8NHW4 92 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 UBTD2Q8WUN7 234 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 SKA2Q8WVK7 121 aaPredicted RBP6.34□□□□□ -1.39
TMC1-201ENST00000297784 OR1E3Q8WZA6 343 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 NCLNQ969V3 563 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 ZNF583Q96ND8 569 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 OR4K3Q96R72 315 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 PKP4Q99569 1192 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 PITX2Q99697 317 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 NARFLQ9H6Q4 476 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 ZNF556Q9HAH1 456 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 C3orf14Q9HBI5 128 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 EXD2Q9NVH0 621 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 ARL15Q9NXU5 204 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 EIF3KQ9UBQ5 218 aaKnown RBP6.34□□□□□ -1.39
TMC1-201ENST00000297784 KLHL21Q9UJP4 597 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 NDRG4Q9ULP0 352 aaKnown RBP6.34□□□□□ -1.39
TMC1-201ENST00000297784 NEUROG3Q9Y4Z2 214 aa6.34□□□□□ -1.39
TMC1-201ENST00000297784 PRAMEF33A0A0G2JMD5 474 aa6.33□□□□□ -1.4
TMC1-201ENST00000297784 LEUTXA8MZ59 168 aa6.33□□□□□ -1.4
TMC1-201ENST00000297784 TRIM77I1YAP6 450 aa6.33□□□□□ -1.4
TMC1-201ENST00000297784 ARHGEF9O43307 516 aa6.33□□□□□ -1.4
TMC1-201ENST00000297784 FAM20BO75063 409 aa6.33□□□□□ -1.4
TMC1-201ENST00000297784 LCKP06239 509 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms