RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 TUBA3CQ13748 450 aa11.18□□□□□ -0.62
RHO-201ENST00000296271 TMEM196Q5HYL7 178 aa11.18□□□□□ -0.62
RHO-201ENST00000296271 C18orf63Q68DL7 685 aa11.18□□□□□ -0.62
RHO-201ENST00000296271 CREB3L4Q8TEY5 395 aa11.18□□□□□ -0.62
RHO-201ENST00000296271 RAB7BQ96AH8 199 aa11.18□□□□□ -0.62
RHO-201ENST00000296271 PITX2Q99697 317 aa11.18□□□□□ -0.62
RHO-201ENST00000296271 PLGRKTQ9HBL7 147 aa11.18□□□□□ -0.62
RHO-201ENST00000296271 ICKQ9UPZ9 632 aa11.18□□□□□ -0.62
RHO-201ENST00000296271 GMEB1Q9Y692 573 aa11.18□□□□□ -0.62
RHO-201ENST00000296271 TBC1D3DA0A087WVF3 549 aa11.17□□□□□ -0.62
RHO-201ENST00000296271 TBC1D3IA0A087WXS9 549 aa11.17□□□□□ -0.62
RHO-201ENST00000296271 TBC1D3EA0A087X179 549 aa11.17□□□□□ -0.62
RHO-201ENST00000296271 TBC1D3KA0A087X1G2 549 aa11.17□□□□□ -0.62
RHO-201ENST00000296271 TBC1D3FA6NER0 549 aaPredicted RBP11.17□□□□□ -0.62
RHO-201ENST00000296271 TBC1D3LB9A6J9 549 aa11.17□□□□□ -0.62
RHO-201ENST00000296271 ANHXE9PGG2 379 aa11.17□□□□□ -0.62
RHO-201ENST00000296271 APODP05090 189 aa11.17□□□□□ -0.62
RHO-201ENST00000296271 STSP08842 583 aa11.17□□□□□ -0.62
RHO-201ENST00000296271 TBC1D3HP0C7X1 549 aa11.17□□□□□ -0.62
RHO-201ENST00000296271 GRK5P34947 590 aa11.17□□□□□ -0.62
RHO-201ENST00000296271 RANBP1P43487 201 aa11.17□□□□□ -0.62
RHO-201ENST00000296271 PCBP4P57723 403 aaKnown RBP11.17□□□□□ -0.62
RHO-201ENST00000296271 HYAL2Q12891 473 aa11.17□□□□□ -0.62
RHO-201ENST00000296271 RPA4Q13156 261 aa11.17□□□□□ -0.62
RHO-201ENST00000296271 FADDQ13158 208 aa11.17□□□□□ -0.62
RHO-201ENST00000296271 KRT33BQ14525 404 aa11.17□□□□□ -0.62
RHO-201ENST00000296271 CRB2Q5IJ48 1285 aa11.17□□□□□ -0.62
RHO-201ENST00000296271 NDUFAF5Q5TEU4 345 aa11.17□□□□□ -0.62
RHO-201ENST00000296271 SAXO2Q658L1 398 aa11.17□□□□□ -0.62
RHO-201ENST00000296271 TBC1D3GQ6DHY5 549 aa11.17□□□□□ -0.62
RHO-201ENST00000296271 TBC1D3CQ6IPX1 549 aa11.17□□□□□ -0.62
RHO-201ENST00000296271 TBC1D3Q8IZP1 549 aaPredicted RBP11.17□□□□□ -0.62
RHO-201ENST00000296271 AQP11Q8NBQ7 271 aa11.17□□□□□ -0.62
RHO-201ENST00000296271 XAGE5Q8WWM1 108 aa11.17□□□□□ -0.62
RHO-201ENST00000296271 UBE2E3Q969T4 207 aa11.17□□□□□ -0.62
RHO-201ENST00000296271 SPATA9Q9BWV2 254 aa11.17□□□□□ -0.62
RHO-201ENST00000296271 GABARAPL3Q9BY60 117 aa11.17□□□□□ -0.62
RHO-201ENST00000296271 GLIPR2Q9H4G4 154 aa11.17□□□□□ -0.62
RHO-201ENST00000296271 SCN3BQ9NY72 215 aa11.17□□□□□ -0.62
RHO-201ENST00000296271 TMEM9Q9P0T7 183 aa11.17□□□□□ -0.62
RHO-201ENST00000296271 FBXW2Q9UKT8 454 aa11.17□□□□□ -0.62
RHO-201ENST00000296271 TPRKBQ9Y3C4 175 aa11.17□□□□□ -0.62
RHO-201ENST00000296271 ATG4BQ9Y4P1 393 aa11.17□□□□□ -0.62
RHO-201ENST00000296271 KCNE3Q9Y6H6 103 aa11.17□□□□□ -0.62
RHO-201ENST00000296271 LRIT2A6NDA9 550 aa11.17□□□□□ -0.62
RHO-201ENST00000296271 ADAM23O75077 832 aa11.17□□□□□ -0.62
RHO-201ENST00000296271 DNAJB6O75190 326 aa11.17□□□□□ -0.62
RHO-201ENST00000296271 GADD45GO95257 159 aa11.17□□□□□ -0.62
RHO-201ENST00000296271 GGT2P36268 569 aa11.17□□□□□ -0.62
RHO-201ENST00000296271 SSR2P43308 183 aa11.17□□□□□ -0.62
RHO-201ENST00000296271 PHEXP78562 749 aa11.17□□□□□ -0.62
RHO-201ENST00000296271 REEP3Q6NUK4 255 aa11.17□□□□□ -0.62
RHO-201ENST00000296271 DEF8Q6ZN54 512 aa11.17□□□□□ -0.62
RHO-201ENST00000296271 ANKRD13BQ86YJ7 626 aa11.17□□□□□ -0.62
RHO-201ENST00000296271 SIMC1Q8NDZ2 872 aa11.17□□□□□ -0.62
RHO-201ENST00000296271 FNDC8Q8TC99 324 aa11.17□□□□□ -0.62
RHO-201ENST00000296271 APOBEC4Q8WW27 367 aaKnown RBP11.17□□□□□ -0.62
RHO-201ENST00000296271 GGHQ92820 318 aa11.17□□□□□ -0.62
RHO-201ENST00000296271 YIPF6Q96EC8 236 aa11.17□□□□□ -0.62
RHO-201ENST00000296271 PDXPQ96GD0 296 aa11.17□□□□□ -0.62
RHO-201ENST00000296271 C16orf58Q96GQ5 468 aa11.17□□□□□ -0.62
RHO-201ENST00000296271 PLEKHA8Q96JA3 519 aa11.17□□□□□ -0.62
RHO-201ENST00000296271 CNDP2Q96KP4 475 aaKnown RBP11.17□□□□□ -0.62
RHO-201ENST00000296271 COPS4Q9BT78 406 aa11.17□□□□□ -0.62
RHO-201ENST00000296271 TRMT61BQ9BVS5 477 aaKnown RBP11.17□□□□□ -0.62
RHO-201ENST00000296271 SLC17A9Q9BYT1 436 aa11.17□□□□□ -0.62
RHO-201ENST00000296271 BTBD1Q9H0C5 482 aa11.17□□□□□ -0.62
RHO-201ENST00000296271 C6orf106Q9H6K1 298 aaPredicted RBP11.17□□□□□ -0.62
RHO-201ENST00000296271 NMNAT1Q9HAN9 279 aaPredicted RBP11.17□□□□□ -0.62
RHO-201ENST00000296271 TRPV4Q9HBA0 871 aa11.17□□□□□ -0.62
RHO-201ENST00000296271 M0R3H8 397 aa11.16□□□□□ -0.62
RHO-201ENST00000296271 ADAMDEC1O15204 470 aa11.16□□□□□ -0.62
RHO-201ENST00000296271 ERI3O43414 337 aaKnown RBP11.16□□□□□ -0.62
RHO-201ENST00000296271 RNGTTO60942 597 aaKnown RBP11.16□□□□□ -0.62
RHO-201ENST00000296271 CLPXO76031 633 aa11.16□□□□□ -0.62
RHO-201ENST00000296271 POU2F2P09086 479 aa11.16□□□□□ -0.62
RHO-201ENST00000296271 TGFBR2P37173 567 aa11.16□□□□□ -0.62
RHO-201ENST00000296271 LIMS1P48059 325 aa11.16□□□□□ -0.62
RHO-201ENST00000296271 CCT3P49368 545 aaKnown RBP11.16□□□□□ -0.62
RHO-201ENST00000296271 PRDX1Q06830 199 aaKnown RBP11.16□□□□□ -0.62
RHO-201ENST00000296271 HYAL1Q12794 435 aa11.16□□□□□ -0.62
RHO-201ENST00000296271 SGCGQ13326 291 aa11.16□□□□□ -0.62
RHO-201ENST00000296271 ATP1A4Q13733 1029 aa11.16□□□□□ -0.62
RHO-201ENST00000296271 PTGES3Q15185 160 aaKnown RBP11.16□□□□□ -0.62
RHO-201ENST00000296271 ZNF630Q2M218 657 aaPredicted RBP11.16□□□□□ -0.62
RHO-201ENST00000296271 PROX2Q3B8N5 592 aa11.16□□□□□ -0.62
RHO-201ENST00000296271 OR4C11Q6IEV9 310 aa11.16□□□□□ -0.62
RHO-201ENST00000296271 CCDC80Q76M96 950 aa11.16□□□□□ -0.62
RHO-201ENST00000296271 TRIM73Q86UV7 250 aa11.16□□□□□ -0.62
RHO-201ENST00000296271 CCDC116Q8IYX3 515 aa11.16□□□□□ -0.62
RHO-201ENST00000296271 OR4E2Q8NGC2 313 aa11.16□□□□□ -0.62
RHO-201ENST00000296271 LZICQ8WZA0 190 aa11.16□□□□□ -0.62
RHO-201ENST00000296271 NEURL3Q96EH8 262 aa11.16□□□□□ -0.62
RHO-201ENST00000296271 COL21A1Q96P44 957 aa11.16□□□□□ -0.62
RHO-201ENST00000296271 ALPK1Q96QP1 1244 aa11.16□□□□□ -0.62
RHO-201ENST00000296271 PIP5K1AQ99755 562 aa11.16□□□□□ -0.62
RHO-201ENST00000296271 ROGDIQ9GZN7 287 aa11.16□□□□□ -0.62
RHO-201ENST00000296271 MVB12BQ9H7P6 319 aa11.16□□□□□ -0.62
RHO-201ENST00000296271 PELI2Q9HAT8 420 aa11.16□□□□□ -0.62
RHO-201ENST00000296271 TRPC4Q9UBN4 977 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms