RNA–Protein interactions for RNA: ENST00000293406.7

LSM12-201, Transcript of LSM12 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM12, Length 2,308 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-201ENST00000293406 IKBIPQ70UQ0 350 aa18.25■□□□□ 0.51
LSM12-201ENST00000293406 CFAP206Q8IYR0 622 aa18.25■□□□□ 0.51
LSM12-201ENST00000293406 FBXO15Q8NCQ5 510 aaPredicted RBP18.25■□□□□ 0.51
LSM12-201ENST00000293406 PROKR2Q8NFJ6 384 aa18.25■□□□□ 0.51
LSM12-201ENST00000293406 GPR32P1Q8NGA4 272 aa18.25■□□□□ 0.51
LSM12-201ENST00000293406 LILRB4Q8NHJ6 448 aa18.25■□□□□ 0.51
LSM12-201ENST00000293406 AP2M1Q96CW1 435 aa18.25■□□□□ 0.51
LSM12-201ENST00000293406 ST6GAL2Q96JF0 529 aa18.25■□□□□ 0.51
LSM12-201ENST00000293406 SORBS1Q9BX66 1292 aaKnown RBP18.25■□□□□ 0.51
LSM12-201ENST00000293406 TSSK6Q9BXA6 273 aa18.25■□□□□ 0.51
LSM12-201ENST00000293406 TIGARQ9NQ88 270 aa18.25■□□□□ 0.51
LSM12-201ENST00000293406 A0A1W2PQ09 198 aa18.24■□□□□ 0.51
LSM12-201ENST00000293406 SLC35F4A4IF30 521 aa18.24■□□□□ 0.51
LSM12-201ENST00000293406 TEX28O15482 410 aa18.24■□□□□ 0.51
LSM12-201ENST00000293406 MXD1Q05195 221 aa18.24■□□□□ 0.51
LSM12-201ENST00000293406 MLLT11Q13015 90 aaPredicted RBP18.24■□□□□ 0.51
LSM12-201ENST00000293406 TRIM60Q495X7 471 aa18.24■□□□□ 0.51
LSM12-201ENST00000293406 TCTN3Q6NUS6 607 aa18.24■□□□□ 0.51
LSM12-201ENST00000293406 WDR53Q7Z5U6 358 aaPredicted RBP18.24■□□□□ 0.51
LSM12-201ENST00000293406 BCDIN3DQ7Z5W3 292 aaKnown RBP18.24■□□□□ 0.51
LSM12-201ENST00000293406 TECPR1Q7Z6L1 1165 aa18.24■□□□□ 0.51
LSM12-201ENST00000293406 TMC8Q8IU68 726 aa18.24■□□□□ 0.51
LSM12-201ENST00000293406 HORMAD2Q8N7B1 307 aa18.24■□□□□ 0.51
LSM12-201ENST00000293406 TCEANCQ8N8B7 351 aa18.24■□□□□ 0.51
LSM12-201ENST00000293406 ZNF740Q8NDX6 193 aa18.24■□□□□ 0.51
LSM12-201ENST00000293406 OR8J1Q8NGP2 316 aa18.24■□□□□ 0.51
LSM12-201ENST00000293406 SLC6A18Q96N87 628 aa18.24■□□□□ 0.51
LSM12-201ENST00000293406 POLR2J3Q9H1A7 115 aaKnown RBP18.24■□□□□ 0.51
LSM12-201ENST00000293406 ICKQ9UPZ9 632 aa18.24■□□□□ 0.51
LSM12-201ENST00000293406 SCN5AQ14524 2016 aa18.24■□□□□ 0.51
LSM12-201ENST00000293406 IQCMA0A1B0GVH7 501 aa18.24■□□□□ 0.51
LSM12-201ENST00000293406 ANKDD1BA6NHY2 528 aa18.24■□□□□ 0.51
LSM12-201ENST00000293406 A8MV72 311 aaPredicted RBP18.24■□□□□ 0.51
LSM12-201ENST00000293406 FAAHO00519 579 aa18.24■□□□□ 0.51
LSM12-201ENST00000293406 MYL12BO14950 172 aa18.24■□□□□ 0.51
LSM12-201ENST00000293406 TPST2O60704 377 aa18.24■□□□□ 0.51
LSM12-201ENST00000293406 SEMA7AO75326 666 aa18.24■□□□□ 0.51
LSM12-201ENST00000293406 H1F0P07305 194 aaKnown RBP18.24■□□□□ 0.51
LSM12-201ENST00000293406 ITGB7P26010 798 aa18.24■□□□□ 0.51
LSM12-201ENST00000293406 LARS2Q15031 903 aaKnown RBP18.24■□□□□ 0.51
LSM12-201ENST00000293406 TAB1Q15750 504 aa18.24■□□□□ 0.51
LSM12-201ENST00000293406 POM121L1PQ3SYA9 428 aa18.24■□□□□ 0.51
LSM12-201ENST00000293406 MFSD4BQ5TF39 518 aa18.24■□□□□ 0.51
LSM12-201ENST00000293406 LIPKQ5VXJ0 399 aa18.24■□□□□ 0.51
LSM12-201ENST00000293406 GPR65Q8IYL9 337 aa18.24■□□□□ 0.51
LSM12-201ENST00000293406 OR9A1PQ8NGU1 263 aa18.24■□□□□ 0.51
LSM12-201ENST00000293406 TMEM19Q96HH6 336 aa18.24■□□□□ 0.51
LSM12-201ENST00000293406 SLC46A2Q9BY10 475 aa18.24■□□□□ 0.51
LSM12-201ENST00000293406 DOCK6Q96HP0 2047 aa18.23■□□□□ 0.51
LSM12-201ENST00000293406 MEIOCA2RUB1 952 aa18.23■□□□□ 0.51
LSM12-201ENST00000293406 SH3BP5O60239 455 aa18.23■□□□□ 0.51
LSM12-201ENST00000293406 CDRT1O95170 752 aa18.23■□□□□ 0.51
LSM12-201ENST00000293406 GSTM5P46439 218 aa18.23■□□□□ 0.51
LSM12-201ENST00000293406 TAP2Q03519 686 aa18.23■□□□□ 0.51
LSM12-201ENST00000293406 SCN1BQ07699 218 aa18.23■□□□□ 0.51
LSM12-201ENST00000293406 HEPACAMQ14CZ8 416 aa18.23■□□□□ 0.51
LSM12-201ENST00000293406 PAQR6Q6TCH4 344 aa18.23■□□□□ 0.51
LSM12-201ENST00000293406 DEF8Q6ZN54 512 aa18.23■□□□□ 0.51
LSM12-201ENST00000293406 PHC2Q8IXK0 858 aa18.23■□□□□ 0.51
LSM12-201ENST00000293406 RAET1EQ8TD07 263 aa18.23■□□□□ 0.51
LSM12-201ENST00000293406 NEURL3Q96EH8 262 aa18.23■□□□□ 0.51
LSM12-201ENST00000293406 DMRTB1Q96MA1 342 aa18.23■□□□□ 0.51
LSM12-201ENST00000293406 A4GALTQ9NPC4 353 aa18.23■□□□□ 0.51
LSM12-201ENST00000293406 CCL26Q9Y258 94 aa18.23■□□□□ 0.51
LSM12-201ENST00000293406 TFECO14948 347 aaPredicted RBP18.23■□□□□ 0.51
LSM12-201ENST00000293406 HOXC11O43248 304 aaPredicted RBP18.23■□□□□ 0.51
LSM12-201ENST00000293406 TBRG1Q3YBR2 411 aa18.23■□□□□ 0.51
LSM12-201ENST00000293406 FAM131AQ6UXB0 335 aa18.23■□□□□ 0.51
LSM12-201ENST00000293406 ADIPOR2Q86V24 386 aa18.23■□□□□ 0.51
LSM12-201ENST00000293406 TEFMQ96QE5 360 aaKnown RBP18.23■□□□□ 0.51
LSM12-201ENST00000293406 NDEL1Q9GZM8 345 aa18.23■□□□□ 0.51
LSM12-201ENST00000293406 MYOFQ9NZM1 2061 aa18.23■□□□□ 0.51
LSM12-201ENST00000293406 LRG1P02750 347 aa18.22■□□□□ 0.51
LSM12-201ENST00000293406 ELFN1P0C7U0 828 aa18.22■□□□□ 0.51
LSM12-201ENST00000293406 CA8P35219 290 aa18.22■□□□□ 0.51
LSM12-201ENST00000293406 WDR5P61964 334 aaKnown RBP18.22■□□□□ 0.51
LSM12-201ENST00000293406 DAB2P98082 770 aa18.22■□□□□ 0.51
LSM12-201ENST00000293406 TARDBPQ13148 414 aaKnown RBP eCLIP18.22■□□□□ 0.512e-7■■■■■ 28
LSM12-201ENST00000293406 RNLSQ5VYX0 342 aa18.22■□□□□ 0.51
LSM12-201ENST00000293406 SAXO2Q658L1 398 aa18.22■□□□□ 0.51
LSM12-201ENST00000293406 PGBD2Q6P3X8 592 aa18.22■□□□□ 0.51
LSM12-201ENST00000293406 DPPA4Q7L190 304 aa18.22■□□□□ 0.51
LSM12-201ENST00000293406 RBM45Q8IUH3 476 aaKnown RBP18.22■□□□□ 0.51
LSM12-201ENST00000293406 CELF5Q8N6W0 485 aaKnown RBP18.22■□□□□ 0.51
LSM12-201ENST00000293406 ASCC1Q8N9N2 400 aaKnown RBP18.22■□□□□ 0.51
LSM12-201ENST00000293406 SLC25A46Q96AG3 418 aa18.22■□□□□ 0.51
LSM12-201ENST00000293406 SLC22A4Q9H015 551 aa18.22■□□□□ 0.51
LSM12-201ENST00000293406 SEMA3GQ9NS98 782 aa18.22■□□□□ 0.51
LSM12-201ENST00000293406 KLHL20Q9Y2M5 609 aa18.22■□□□□ 0.51
LSM12-201ENST00000293406 HMX3A6NHT5 357 aa18.22■□□□□ 0.51
LSM12-201ENST00000293406 HEPACAM2A8MVW5 462 aa18.22■□□□□ 0.51
LSM12-201ENST00000293406 PQBP1O60828 265 aaKnown RBP18.22■□□□□ 0.51
LSM12-201ENST00000293406 OPRD1P41143 372 aa18.22■□□□□ 0.51
LSM12-201ENST00000293406 MANFP55145 182 aaKnown RBP18.22■□□□□ 0.51
LSM12-201ENST00000293406 OCLNQ16625 522 aa18.22■□□□□ 0.51
LSM12-201ENST00000293406 TMIGD1Q6UXZ0 262 aa18.22■□□□□ 0.51
LSM12-201ENST00000293406 CYB5D2Q8WUJ1 264 aa18.22■□□□□ 0.51
LSM12-201ENST00000293406 RAB8BQ92930 207 aa18.22■□□□□ 0.51
LSM12-201ENST00000293406 UBE2E3Q969T4 207 aa18.22■□□□□ 0.51
LSM12-201ENST00000293406 DHRS1Q96LJ7 313 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms