RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 CCM2Q9BSQ5 444 aa9.9□□□□□ -0.82
SKA1-201ENST00000285116 UCK2Q9BZX2 261 aa9.9□□□□□ -0.82
SKA1-201ENST00000285116 EXOSC4Q9NPD3 245 aaKnown RBP9.9□□□□□ -0.82
SKA1-201ENST00000285116 DUSP12Q9UNI6 340 aa9.9□□□□□ -0.82
SKA1-201ENST00000285116 LSM2Q9Y333 95 aaKnown RBP9.9□□□□□ -0.82
SKA1-201ENST00000285116 ENPP4Q9Y6X5 453 aa9.9□□□□□ -0.82
SKA1-201ENST00000285116 KIAA1549LQ6ZVL6 1849 aa9.9□□□□□ -0.83
SKA1-201ENST00000285116 PRAMEF25A6NGN4 478 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 PITPNM1O00562 1244 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 NPC1O15118 1278 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 GPR37L1O60883 481 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 OR2B3O76000 313 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 SOD2P04179 222 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 CTSAP10619 480 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 CSF2RAP15509 400 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 POLR2LP62875 67 aaKnown RBP9.89□□□□□ -0.83
SKA1-201ENST00000285116 ZNF763Q0D2J5 394 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 SCARB2Q14108 478 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 TAF12Q16514 161 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 TRIM40Q6P9F5 258 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 AGTRAPQ6RW13 159 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 IKBIPQ70UQ0 350 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 GLRX5Q86SX6 157 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 TRIM69Q86WT6 500 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 TRAM1L1Q8N609 369 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 OR7G3Q8NG95 312 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 ENKURQ8TC29 256 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 BTN2A2Q8WVV5 523 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 APOBEC4Q8WW27 367 aaKnown RBP9.89□□□□□ -0.83
SKA1-201ENST00000285116 OR4K3Q96R72 315 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 SLC22A12Q96S37 553 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 GTPBP2Q9BX10 602 aaKnown RBP9.89□□□□□ -0.83
SKA1-201ENST00000285116 PRRG3Q9BZD7 231 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 BRD9Q9H8M2 597 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 TAS2R16Q9NYV7 291 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 MBD1Q9UIS9 605 aaPredicted RBP9.89□□□□□ -0.83
SKA1-201ENST00000285116 PCM1Q15154 2024 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.89□□□□□ -0.83
SKA1-201ENST00000285116 GRXCR1A8MXD5 290 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 LEUTXA8MZ59 168 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 ETHE1O95571 254 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 SCG5P05408 212 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 UQCRC1P31930 480 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 EPHB3P54753 998 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 SPIBQ01892 262 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 BTBD16Q32M84 506 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 ZNF658BQ4V348 819 aaPredicted RBP9.89□□□□□ -0.83
SKA1-201ENST00000285116 PDZK1Q5T2W1 519 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 SLCO4C1Q6ZQN7 724 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 GPR65Q8IYL9 337 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 OR4M1Q8NGD0 313 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 WDR36Q8NI36 951 aaKnown RBP9.89□□□□□ -0.83
SKA1-201ENST00000285116 UTP15Q8TED0 518 aaKnown RBP9.89□□□□□ -0.83
SKA1-201ENST00000285116 PPP1R16AQ96I34 528 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 NIPSNAP1Q9BPW8 284 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 NARFLQ9H6Q4 476 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 SGK2Q9HBY8 427 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 RLIMQ9NVW2 624 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 ING3Q9NXR8 418 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 SEC14L4Q9UDX3 406 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 ICKQ9UPZ9 632 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 MTCL1Q9Y4B5 1905 aaKnown RBP9.89□□□□□ -0.83
SKA1-201ENST00000285116 SLC5A10A0PJK1 596 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 OR5K3A6NET4 321 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 MGAT4DA6NG13 374 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 TBX19O60806 448 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 TMCC2O75069 709 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 CCNB2O95067 398 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 CSF3P09919 207 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 FURINP09958 794 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 CYP2A6P11509 494 aaPredicted RBP9.89□□□□□ -0.83
SKA1-201ENST00000285116 ZNF8P17098 575 aaPredicted RBP9.89□□□□□ -0.83
SKA1-201ENST00000285116 ITGB7P26010 798 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 CD70P32970 193 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 KIR2DL3P43628 341 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 GPR19Q15760 415 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 BRAT1Q6PJG6 821 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 AMIGO1Q86WK6 493 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 SPPL2AQ8TCT8 520 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 OMA1Q96E52 524 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 OPALINQ96PE5 141 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 EPHX3Q9H6B9 360 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 ZNF334Q9HCZ1 680 aaPredicted RBP9.89□□□□□ -0.83
SKA1-201ENST00000285116 SNTG1Q9NSN8 517 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 CLN6Q9NWW5 311 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 B4GALT6Q9UBX8 382 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 ZNF451Q9Y4E5 1061 aa9.89□□□□□ -0.83
SKA1-201ENST00000285116 ZNF670-ZNF695F2Z2N8 137 aa9.88□□□□□ -0.83
SKA1-201ENST00000285116 PDPK1O15530 556 aa9.88□□□□□ -0.83
SKA1-201ENST00000285116 LGI1O95970 557 aa9.88□□□□□ -0.83
SKA1-201ENST00000285116 ADAP00813 363 aa9.88□□□□□ -0.83
SKA1-201ENST00000285116 CATP04040 527 aaKnown RBP9.88□□□□□ -0.83
SKA1-201ENST00000285116 CSF2P04141 144 aa9.88□□□□□ -0.83
SKA1-201ENST00000285116 ACADMP11310 421 aa9.88□□□□□ -0.83
SKA1-201ENST00000285116 ALAS2P22557 587 aa9.88□□□□□ -0.83
SKA1-201ENST00000285116 PSMA1P25786 263 aaKnown RBP9.88□□□□□ -0.83
SKA1-201ENST00000285116 VIPR1P32241 457 aa9.88□□□□□ -0.83
SKA1-201ENST00000285116 CDH12P55289 794 aa9.88□□□□□ -0.83
SKA1-201ENST00000285116 TAGLNQ01995 201 aaKnown RBP9.88□□□□□ -0.83
SKA1-201ENST00000285116 LARS2Q15031 903 aaKnown RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms