RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 HTR4Q13639 388 aa17.44■□□□□ 0.38
PDLIM3-201ENST00000284767 ZNF544Q6NX49 715 aa17.44■□□□□ 0.38
PDLIM3-201ENST00000284767 ZNF367Q7RTV3 350 aa17.44■□□□□ 0.38
PDLIM3-201ENST00000284767 LRRTM4Q86VH4 590 aa17.44■□□□□ 0.38
PDLIM3-201ENST00000284767 Q8N9G6 341 aaPredicted RBP17.44■□□□□ 0.38
PDLIM3-201ENST00000284767 CHTF18Q8WVB6 975 aa17.44■□□□□ 0.38
PDLIM3-201ENST00000284767 C17orf50Q8WW18 174 aa17.44■□□□□ 0.38
PDLIM3-201ENST00000284767 MIR1-1HGQ9H1L0 117 aa17.44■□□□□ 0.38
PDLIM3-201ENST00000284767 DPEP2Q9H4A9 486 aa17.44■□□□□ 0.38
PDLIM3-201ENST00000284767 AMBNQ9NP70 447 aa17.44■□□□□ 0.38
PDLIM3-201ENST00000284767 GPR83Q9NYM4 423 aa17.44■□□□□ 0.38
PDLIM3-201ENST00000284767 NOX1Q9Y5S8 564 aa17.44■□□□□ 0.38
PDLIM3-201ENST00000284767 H0YIV9 168 aa17.43■□□□□ 0.38
PDLIM3-201ENST00000284767 ZW10O43264 779 aa17.43■□□□□ 0.38
PDLIM3-201ENST00000284767 PTHP01270 115 aa17.43■□□□□ 0.38
PDLIM3-201ENST00000284767 STSP08842 583 aa17.43■□□□□ 0.38
PDLIM3-201ENST00000284767 GABRB1P18505 474 aa17.43■□□□□ 0.38
PDLIM3-201ENST00000284767 MAGP20916 626 aa17.43■□□□□ 0.38
PDLIM3-201ENST00000284767 CTHP32929 405 aa17.43■□□□□ 0.38
PDLIM3-201ENST00000284767 CRYBA2P53672 197 aa17.43■□□□□ 0.38
PDLIM3-201ENST00000284767 SLBPQ14493 270 aaKnown RBP eCLIP17.43■□□□□ 0.38
PDLIM3-201ENST00000284767 TIMM50Q3ZCQ8 353 aa17.43■□□□□ 0.38
PDLIM3-201ENST00000284767 TMEM31Q5JXX7 168 aa17.43■□□□□ 0.38
PDLIM3-201ENST00000284767 ZNF776Q68DI1 518 aaPredicted RBP17.43■□□□□ 0.38
PDLIM3-201ENST00000284767 C1orf52Q8N6N3 182 aaKnown RBP17.43■□□□□ 0.38
PDLIM3-201ENST00000284767 TFGQ92734 400 aaPredicted RBP17.43■□□□□ 0.38
PDLIM3-201ENST00000284767 CHCHD6Q9BRQ6 235 aa17.43■□□□□ 0.38
PDLIM3-201ENST00000284767 WDR26Q9H7D7 661 aa17.43■□□□□ 0.38
PDLIM3-201ENST00000284767 PRDM8Q9NQV8 689 aa17.43■□□□□ 0.38
PDLIM3-201ENST00000284767 ZNF221Q9UK13 617 aa17.43■□□□□ 0.38
PDLIM3-201ENST00000284767 FZD4Q9ULV1 537 aa17.43■□□□□ 0.38
PDLIM3-201ENST00000284767 CAB39Q9Y376 341 aaPredicted RBP17.43■□□□□ 0.38
PDLIM3-201ENST00000284767 PCDHGA2Q9Y5H1 932 aa17.43■□□□□ 0.38
PDLIM3-201ENST00000284767 A0A1W2PQF6 199 aa17.43■□□□□ 0.38
PDLIM3-201ENST00000284767 A0A1W2PQU0 124 aa17.43■□□□□ 0.38
PDLIM3-201ENST00000284767 ACP5P13686 325 aa17.43■□□□□ 0.38
PDLIM3-201ENST00000284767 PCGF2P35227 344 aa17.43■□□□□ 0.38
PDLIM3-201ENST00000284767 HNF4AP41235 474 aa17.43■□□□□ 0.38
PDLIM3-201ENST00000284767 PNLIPRP1P54315 467 aa17.43■□□□□ 0.38
PDLIM3-201ENST00000284767 ZNF33BQ06732 778 aa17.43■□□□□ 0.38
PDLIM3-201ENST00000284767 HKDC1Q2TB90 917 aa17.43■□□□□ 0.38
PDLIM3-201ENST00000284767 FBXO15Q8NCQ5 510 aaPredicted RBP17.43■□□□□ 0.38
PDLIM3-201ENST00000284767 OR10G2Q8NGC3 310 aa17.43■□□□□ 0.38
PDLIM3-201ENST00000284767 Q96MT0 163 aa17.43■□□□□ 0.38
PDLIM3-201ENST00000284767 RNF167Q9H6Y7 350 aa17.43■□□□□ 0.38
PDLIM3-201ENST00000284767 ZNF226Q9NYT6 803 aa17.43■□□□□ 0.38
PDLIM3-201ENST00000284767 BTBD3Q9Y2F9 522 aa17.43■□□□□ 0.38
PDLIM3-201ENST00000284767 H3BQ06 376 aaPredicted RBP17.42■□□□□ 0.38
PDLIM3-201ENST00000284767 IDH3BO43837 385 aa17.42■□□□□ 0.38
PDLIM3-201ENST00000284767 KLF8O95600 359 aaPredicted RBP17.42■□□□□ 0.38
PDLIM3-201ENST00000284767 NTSR1P30989 418 aa17.42■□□□□ 0.38
PDLIM3-201ENST00000284767 TEAD4Q15561 434 aa17.42■□□□□ 0.38
PDLIM3-201ENST00000284767 SOWAHCQ53LP3 525 aaPredicted RBP17.42■□□□□ 0.38
PDLIM3-201ENST00000284767 PDZD3Q86UT5 571 aa17.42■□□□□ 0.38
PDLIM3-201ENST00000284767 KLHDC8AQ8IYD2 350 aa17.42■□□□□ 0.38
PDLIM3-201ENST00000284767 CLECL1Q8IZS7 167 aa17.42■□□□□ 0.38
PDLIM3-201ENST00000284767 CELF2-AS1Q8N7Q2 184 aa17.42■□□□□ 0.38
PDLIM3-201ENST00000284767 TP53I13Q8NBR0 393 aaPredicted RBP17.42■□□□□ 0.38
PDLIM3-201ENST00000284767 SGPP1Q9BX95 441 aa17.42■□□□□ 0.38
PDLIM3-201ENST00000284767 OSGEPL1Q9H4B0 414 aa17.42■□□□□ 0.38
PDLIM3-201ENST00000284767 ZNF576Q9H609 170 aa17.42■□□□□ 0.38
PDLIM3-201ENST00000284767 CCDC177Q9NQR7 707 aaPredicted RBP17.42■□□□□ 0.38
PDLIM3-201ENST00000284767 MOSPD1Q9UJG1 213 aa17.42■□□□□ 0.38
PDLIM3-201ENST00000284767 TRAPPC4Q9Y296 219 aa17.42■□□□□ 0.38
PDLIM3-201ENST00000284767 A8MVJ9 347 aa17.42■□□□□ 0.38
PDLIM3-201ENST00000284767 KRT75O95678 551 aa17.42■□□□□ 0.38
PDLIM3-201ENST00000284767 ABCB1P08183 1280 aaPredicted RBP17.42■□□□□ 0.38
PDLIM3-201ENST00000284767 IDH2P48735 452 aaKnown RBP17.42■□□□□ 0.38
PDLIM3-201ENST00000284767 RAE1P78406 368 aaKnown RBP17.42■□□□□ 0.38
PDLIM3-201ENST00000284767 ACSM2AQ08AH3 577 aa17.42■□□□□ 0.38
PDLIM3-201ENST00000284767 ST3GAL4Q11206 333 aa17.42■□□□□ 0.38
PDLIM3-201ENST00000284767 ACSM2BQ68CK6 577 aa17.42■□□□□ 0.38
PDLIM3-201ENST00000284767 C19orf48Q6RUI8 117 aa17.42■□□□□ 0.38
PDLIM3-201ENST00000284767 NLGN4XQ8N0W4 816 aa17.42■□□□□ 0.38
PDLIM3-201ENST00000284767 SLC5A8Q8N695 610 aa17.42■□□□□ 0.38
PDLIM3-201ENST00000284767 FLCNQ8NFG4 579 aa17.42■□□□□ 0.38
PDLIM3-201ENST00000284767 TP53INP1Q96A56 240 aa17.42■□□□□ 0.38
PDLIM3-201ENST00000284767 TEX101Q9BY14 249 aa17.42■□□□□ 0.38
PDLIM3-201ENST00000284767 WBP11Q9Y2W2 641 aaKnown RBP17.42■□□□□ 0.38
PDLIM3-201ENST00000284767 GRIP1Q9Y3R0 1128 aa17.42■□□□□ 0.38
PDLIM3-201ENST00000284767 PDZK1P1A8MUH7 402 aa17.41■□□□□ 0.38
PDLIM3-201ENST00000284767 YY2O15391 372 aa17.41■□□□□ 0.38
PDLIM3-201ENST00000284767 SLC31A1O15431 190 aa17.41■□□□□ 0.38
PDLIM3-201ENST00000284767 TGFB1P01137 390 aa17.41■□□□□ 0.38
PDLIM3-201ENST00000284767 HOXB2P14652 356 aa17.41■□□□□ 0.38
PDLIM3-201ENST00000284767 TNFRSF4P43489 277 aa17.41■□□□□ 0.38
PDLIM3-201ENST00000284767 SLC15A1P46059 708 aa17.41■□□□□ 0.38
PDLIM3-201ENST00000284767 CLCNKAP51800 687 aa17.41■□□□□ 0.38
PDLIM3-201ENST00000284767 NUDT6P53370 316 aa17.41■□□□□ 0.38
PDLIM3-201ENST00000284767 OR2B6P58173 313 aa17.41■□□□□ 0.38
PDLIM3-201ENST00000284767 OR6F1Q8NGZ6 308 aa17.41■□□□□ 0.38
PDLIM3-201ENST00000284767 LILRB4Q8NHJ6 448 aa17.41■□□□□ 0.38
PDLIM3-201ENST00000284767 SETD6Q8TBK2 473 aa17.41■□□□□ 0.38
PDLIM3-201ENST00000284767 SNX18Q96RF0 628 aa17.41■□□□□ 0.38
PDLIM3-201ENST00000284767 OR51B5Q9H339 312 aa17.41■□□□□ 0.38
PDLIM3-201ENST00000284767 NDUFAF4Q9P032 175 aa17.41■□□□□ 0.38
PDLIM3-201ENST00000284767 CRNNQ9UBG3 495 aaPredicted RBP17.41■□□□□ 0.38
PDLIM3-201ENST00000284767 BTNL2Q9UIR0 455 aa17.41■□□□□ 0.38
PDLIM3-201ENST00000284767 KCNK6Q9Y257 313 aa17.41■□□□□ 0.38
PDLIM3-201ENST00000284767 DYRK1BQ9Y463 629 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms