RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 SLCO1B1Q9Y6L6 691 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 COL4A3Q01955 1670 aa4.31□□□□□ -1.72
CD44-202ENST00000278385 MGAMO43451 1857 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 PLXNB2O15031 1838 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 ZNF236Q9UL36 1845 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 ASTN1O14525 1302 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 TRAV25A0A0B4J276 109 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 A0A1W2PPQ1 181 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 GRID2IPA4D2P6 1211 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 ANKRD66B4E2M5 251 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 MDM4O15151 490 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 ADAM12O43184 909 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 GRID2O43424 1007 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 RNF13O43567 381 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 CHMP2AO43633 222 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 CLN5O75503 358 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 NXPH3O95157 252 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 PIGNO95427 931 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 GAS8O95995 478 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 RPSAP08865 295 aaKnown RBP4.3□□□□□ -1.72
CD44-202ENST00000278385 ALDOCP09972 364 aaKnown RBP4.3□□□□□ -1.72
CD44-202ENST00000278385 CALM1P0DP23 149 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 CALM2P0DP24 149 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 CALM3P0DP25 149 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 RRASP10301 218 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 ZNF44P15621 663 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 HNF1AP20823 631 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 TGM2P21980 687 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 EPHB2P29323 1055 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 EVI2BP34910 448 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 OR1D2P34982 312 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 SPAM1P38567 509 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 PRCPP42785 496 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 NSFP46459 744 aaKnown RBP4.3□□□□□ -1.72
CD44-202ENST00000278385 ATP12AP54707 1039 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 ADPRHP54922 357 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 SELPLGQ14242 412 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 GK2Q14410 553 aaPredicted RBP4.3□□□□□ -1.72
CD44-202ENST00000278385 NECTIN1Q15223 517 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 PTPRRQ15256 657 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 SHHQ15465 462 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 CARTPTQ16568 116 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 FAM76BQ5HYJ3 339 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 C6orf10Q5SRN2 563 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 FAM173BQ6P4H8 233 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 ANKRD16Q6P6B7 361 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 LRRC8BQ6P9F7 803 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 VWA1Q6PCB0 445 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 CXCL17Q6UXB2 119 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 COLCA1Q6ZS62 124 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 STOX1Q6ZVD7 989 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 ANO5Q75V66 913 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 TMPRSS9Q7Z410 1059 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 NRARPQ7Z6K4 114 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 VTCN1Q7Z7D3 282 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 KIAA1328Q86T90 577 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 LUZP2Q86TE4 346 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 FAM131BQ86XD5 332 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 FOXRED2Q8IWF2 684 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 MB21D2Q8IYB1 491 aaPredicted RBP4.3□□□□□ -1.72
CD44-202ENST00000278385 ADGRF3Q8IZF5 1079 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 TMEM199Q8N511 208 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 SLC25A41Q8N5S1 370 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 KIAA0895Q8NCT3 520 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 ADPRHL1Q8NDY3 354 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 CDC26Q8NHZ8 85 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 CHPT1Q8WUD6 406 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 CIDECQ96AQ7 238 aaPredicted RBP4.3□□□□□ -1.72
CD44-202ENST00000278385 ORAI1Q96D31 301 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 SPDL1Q96EA4 605 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 ELMO2Q96JJ3 720 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 ZNF48Q96MX3 618 aaPredicted RBP4.3□□□□□ -1.72
CD44-202ENST00000278385 INPP4AQ96PE3 977 aaPredicted RBP4.3□□□□□ -1.72
CD44-202ENST00000278385 TAAR1Q96RJ0 339 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 RASL10BQ96S79 203 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 MYADMQ96S97 322 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 OSBPL9Q96SU4 736 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 SEPHS2Q99611 448 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 FAM110AQ9BQ89 295 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 ACBD6Q9BR61 282 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 TRMOQ9BU70 441 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 ACTRT3Q9BYD9 372 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 CPVLQ9H3G5 476 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 RAD21L1Q9H4I0 556 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 CATSPERBQ9H7T0 1116 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 SFXN1Q9H9B4 322 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 CALHM2Q9HA72 323 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 SLC28A3Q9HAS3 691 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 BPIFA1Q9NP55 256 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 SYBUQ9NX95 663 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 SLC17A6Q9P2U8 582 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 UXTQ9UBK9 157 aaPredicted RBP4.3□□□□□ -1.72
CD44-202ENST00000278385 RNF14Q9UBS8 474 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 SERTAD3Q9UJW9 196 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 TBX21Q9UL17 535 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 PCDHA12Q9UN75 941 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 ERVK-19Q9WJR5 959 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 SLC22A14Q9Y267 594 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 IFT52Q9Y366 437 aa4.3□□□□□ -1.72
CD44-202ENST00000278385 SH3GLB1Q9Y371 365 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms