RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 MMP12P39900 470 aa12.3□□□□□ -0.44
C9orf3-201ENST00000277198 ST3GAL4Q11206 333 aa12.3□□□□□ -0.44
C9orf3-201ENST00000277198 TMEM196Q5HYL7 178 aa12.3□□□□□ -0.44
C9orf3-201ENST00000277198 COX20Q5RI15 118 aa12.3□□□□□ -0.44
C9orf3-201ENST00000277198 TMEM220Q6QAJ8 160 aa12.3□□□□□ -0.44
C9orf3-201ENST00000277198 SLC44A2Q8IWA5 706 aaPredicted RBP12.3□□□□□ -0.44
C9orf3-201ENST00000277198 SYTL1Q8IYJ3 562 aa12.3□□□□□ -0.44
C9orf3-201ENST00000277198 OR4K1Q8NGD4 311 aa12.3□□□□□ -0.44
C9orf3-201ENST00000277198 NFKBIDQ8NI38 313 aa12.3□□□□□ -0.44
C9orf3-201ENST00000277198 C16orf78Q8WTQ4 265 aa12.3□□□□□ -0.44
C9orf3-201ENST00000277198 SETD7Q8WTS6 366 aaKnown RBP12.3□□□□□ -0.44
C9orf3-201ENST00000277198 OTUB2Q96DC9 234 aa12.3□□□□□ -0.44
C9orf3-201ENST00000277198 NIPSNAP1Q9BPW8 284 aa12.3□□□□□ -0.44
C9orf3-201ENST00000277198 RACGAP1Q9H0H5 632 aa12.3□□□□□ -0.44
C9orf3-201ENST00000277198 SPHK2Q9NRA0 654 aa12.3□□□□□ -0.44
C9orf3-201ENST00000277198 GULP1Q9UBP9 304 aa12.3□□□□□ -0.44
C9orf3-201ENST00000277198 KCND3Q9UK17 655 aa12.3□□□□□ -0.44
C9orf3-201ENST00000277198 C17orf113A0A1B0GUU1 675 aa12.3□□□□□ -0.44
C9orf3-201ENST00000277198 PIPSLA2A3N6 862 aa12.3□□□□□ -0.44
C9orf3-201ENST00000277198 MED26O95402 600 aa12.3□□□□□ -0.44
C9orf3-201ENST00000277198 CBLP22681 906 aa12.3□□□□□ -0.44
C9orf3-201ENST00000277198 CHI3L1P36222 383 aaPredicted RBP12.3□□□□□ -0.44
C9orf3-201ENST00000277198 SLC6A11P48066 632 aa12.3□□□□□ -0.44
C9orf3-201ENST00000277198 NUBP1P53384 320 aa12.3□□□□□ -0.44
C9orf3-201ENST00000277198 CSTF1Q05048 431 aaKnown RBP12.3□□□□□ -0.44
C9orf3-201ENST00000277198 DMWDQ09019 674 aa12.3□□□□□ -0.44
C9orf3-201ENST00000277198 C2orf80Q0P641 193 aa12.3□□□□□ -0.44
C9orf3-201ENST00000277198 DNASE1L3Q13609 305 aa12.3□□□□□ -0.44
C9orf3-201ENST00000277198 SLBPQ14493 270 aaKnown RBP eCLIP12.3□□□□□ -0.44
C9orf3-201ENST00000277198 ARMCX4Q5H9R4 360 aa12.3□□□□□ -0.44
C9orf3-201ENST00000277198 TPRG1LQ5T0D9 272 aa12.3□□□□□ -0.44
C9orf3-201ENST00000277198 ADNP2Q6IQ32 1131 aa12.3□□□□□ -0.44
C9orf3-201ENST00000277198 LIPIQ6XZB0 460 aa12.3□□□□□ -0.44
C9orf3-201ENST00000277198 Q6ZPB1 254 aaPredicted RBP12.3□□□□□ -0.44
C9orf3-201ENST00000277198 OR9A1PQ8NGU1 263 aa12.3□□□□□ -0.44
C9orf3-201ENST00000277198 ZNF514Q96K75 400 aaPredicted RBP12.3□□□□□ -0.44
C9orf3-201ENST00000277198 MRGPRX3Q96LB0 322 aa12.3□□□□□ -0.44
C9orf3-201ENST00000277198 NELL2Q99435 816 aa12.3□□□□□ -0.44
C9orf3-201ENST00000277198 CDADC1Q9BWV3 514 aa12.3□□□□□ -0.44
C9orf3-201ENST00000277198 SIAEQ9HAT2 523 aa12.3□□□□□ -0.44
C9orf3-201ENST00000277198 RLIMQ9NVW2 624 aa12.3□□□□□ -0.44
C9orf3-201ENST00000277198 MARK1Q9P0L2 795 aa12.3□□□□□ -0.44
C9orf3-201ENST00000277198 PNMA8BQ9ULN7 279 aaPredicted RBP12.3□□□□□ -0.44
C9orf3-201ENST00000277198 CFL2Q9Y281 166 aa12.3□□□□□ -0.44
C9orf3-201ENST00000277198 A0A1W2PRB8 838 aa12.29□□□□□ -0.44
C9orf3-201ENST00000277198 ZAR1LA6NP61 321 aa12.29□□□□□ -0.44
C9orf3-201ENST00000277198 TBX19O60806 448 aa12.29□□□□□ -0.44
C9orf3-201ENST00000277198 PLXNA2O75051 1894 aa12.29□□□□□ -0.44
C9orf3-201ENST00000277198 GADD45GO95257 159 aa12.29□□□□□ -0.44
C9orf3-201ENST00000277198 OPN1SWP03999 348 aa12.29□□□□□ -0.44
C9orf3-201ENST00000277198 STSP08842 583 aa12.29□□□□□ -0.44
C9orf3-201ENST00000277198 ELFN1P0C7U0 828 aa12.29□□□□□ -0.44
C9orf3-201ENST00000277198 UQCRC2P22695 453 aa12.29□□□□□ -0.44
C9orf3-201ENST00000277198 SOX6P35712 828 aa12.29□□□□□ -0.44
C9orf3-201ENST00000277198 OPRD1P41143 372 aa12.29□□□□□ -0.44
C9orf3-201ENST00000277198 PTGES3Q15185 160 aaKnown RBP12.29□□□□□ -0.44
C9orf3-201ENST00000277198 DHCR24Q15392 516 aa12.29□□□□□ -0.44
C9orf3-201ENST00000277198 SLC5A12Q1EHB4 618 aa12.29□□□□□ -0.44
C9orf3-201ENST00000277198 LY6G5CQ5SRR4 150 aa12.29□□□□□ -0.44
C9orf3-201ENST00000277198 ZNF648Q5T619 568 aaPredicted RBP12.29□□□□□ -0.44
C9orf3-201ENST00000277198 NXPE4Q6UWF7 544 aa12.29□□□□□ -0.44
C9orf3-201ENST00000277198 GALNT6Q8NCL4 622 aa12.29□□□□□ -0.44
C9orf3-201ENST00000277198 UTP15Q8TED0 518 aaKnown RBP12.29□□□□□ -0.44
C9orf3-201ENST00000277198 SLC5A11Q8WWX8 675 aa12.29□□□□□ -0.44
C9orf3-201ENST00000277198 TXNDC15Q96J42 360 aa12.29□□□□□ -0.44
C9orf3-201ENST00000277198 LINC00615Q96LM1 132 aaPredicted RBP12.29□□□□□ -0.44
C9orf3-201ENST00000277198 DPEP2Q9H4A9 486 aa12.29□□□□□ -0.44
C9orf3-201ENST00000277198 PRM3Q9NNZ6 103 aa12.29□□□□□ -0.44
C9orf3-201ENST00000277198 GPR83Q9NYM4 423 aa12.29□□□□□ -0.44
C9orf3-201ENST00000277198 AHSPQ9NZD4 102 aa12.29□□□□□ -0.44
C9orf3-201ENST00000277198 ZNF229Q9UJW7 825 aa12.29□□□□□ -0.44
C9orf3-201ENST00000277198 IFT52Q9Y366 437 aa12.29□□□□□ -0.44
C9orf3-201ENST00000277198 GPC6Q9Y625 555 aaPredicted RBP12.29□□□□□ -0.44
C9orf3-201ENST00000277198 EP300Q09472 2414 aaPredicted RBP12.29□□□□□ -0.44
C9orf3-201ENST00000277198 PRAMEF25A6NGN4 478 aa12.29□□□□□ -0.44
C9orf3-201ENST00000277198 DSCR3O14972 297 aa12.29□□□□□ -0.44
C9orf3-201ENST00000277198 LAMTOR5O43504 91 aa12.29□□□□□ -0.44
C9orf3-201ENST00000277198 IFNW1P05000 195 aa12.29□□□□□ -0.44
C9orf3-201ENST00000277198 PDHA2P29803 388 aa12.29□□□□□ -0.44
C9orf3-201ENST00000277198 OR1E2P47887 323 aa12.29□□□□□ -0.44
C9orf3-201ENST00000277198 UGT2B15P54855 530 aa12.29□□□□□ -0.44
C9orf3-201ENST00000277198 MPEG1Q2M385 716 aa12.29□□□□□ -0.44
C9orf3-201ENST00000277198 FRMPD2BQ6IN97 320 aa12.29□□□□□ -0.44
C9orf3-201ENST00000277198 REEP3Q6NUK4 255 aa12.29□□□□□ -0.44
C9orf3-201ENST00000277198 ZNF765Q7L2R6 523 aa12.29□□□□□ -0.44
C9orf3-201ENST00000277198 ASCL5Q7RTU5 278 aa12.29□□□□□ -0.44
C9orf3-201ENST00000277198 RNF130Q86XS8 419 aa12.29□□□□□ -0.44
C9orf3-201ENST00000277198 SNX29P2Q8IUI4 249 aa12.29□□□□□ -0.44
C9orf3-201ENST00000277198 LRRC56Q8IYG6 542 aaPredicted RBP12.29□□□□□ -0.44
C9orf3-201ENST00000277198 LILRA3Q8N6C8 439 aaPredicted RBP12.29□□□□□ -0.44
C9orf3-201ENST00000277198 OR52J3Q8NH60 311 aa12.29□□□□□ -0.44
C9orf3-201ENST00000277198 CHAC2Q8WUX2 184 aa12.29□□□□□ -0.44
C9orf3-201ENST00000277198 PDXPQ96GD0 296 aa12.29□□□□□ -0.44
C9orf3-201ENST00000277198 Q96MT0 163 aa12.29□□□□□ -0.44
C9orf3-201ENST00000277198 FAM129BQ96TA1 746 aa12.29□□□□□ -0.44
C9orf3-201ENST00000277198 WRAP53Q9BUR4 548 aaKnown RBP12.29□□□□□ -0.44
C9orf3-201ENST00000277198 C6orf62Q9GZU0 229 aaPredicted RBP12.29□□□□□ -0.44
C9orf3-201ENST00000277198 ZDHHC4Q9NPG8 344 aa12.29□□□□□ -0.44
C9orf3-201ENST00000277198 CLN6Q9NWW5 311 aa12.29□□□□□ -0.44
C9orf3-201ENST00000277198 MS4A12Q9NXJ0 267 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms