RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 CEP68Q76N32 757 aa11.58□□□□□ -0.56
SMG6-201ENST00000263073 TMCO2Q7Z6W1 182 aaPredicted RBP11.58□□□□□ -0.56
SMG6-201ENST00000263073 ZNF527Q8NB42 609 aa11.58□□□□□ -0.56
SMG6-201ENST00000263073 NPY6RQ99463 290 aa11.58□□□□□ -0.56
SMG6-201ENST00000263073 SMOC2Q9H3U7 446 aa11.58□□□□□ -0.56
SMG6-201ENST00000263073 C5AR2Q9P296 337 aa11.58□□□□□ -0.56
SMG6-201ENST00000263073 SCP2D1Q9UJQ7 156 aa11.58□□□□□ -0.56
SMG6-201ENST00000263073 STK19P49842 368 aaPredicted RBP11.57□□□□□ -0.56
SMG6-201ENST00000263073 OR8J3Q8NGG0 315 aa11.57□□□□□ -0.56
SMG6-201ENST00000263073 POLDIP3Q9BY77 421 aaKnown RBP11.57□□□□□ -0.56
SMG6-201ENST00000263073 GPRC5BQ9NZH0 403 aa11.57□□□□□ -0.56
SMG6-201ENST00000263073 POU2F3Q9UKI9 436 aa11.57□□□□□ -0.56
SMG6-201ENST00000263073 DNAJC15Q9Y5T4 150 aa11.57□□□□□ -0.56
SMG6-201ENST00000263073 HYKKA2RU49 373 aa11.57□□□□□ -0.56
SMG6-201ENST00000263073 AGAP5A6NIR3 686 aa11.57□□□□□ -0.56
SMG6-201ENST00000263073 PRMT3O60678 531 aa11.57□□□□□ -0.56
SMG6-201ENST00000263073 GSTM2P28161 218 aa11.57□□□□□ -0.56
SMG6-201ENST00000263073 HOXC12P31275 282 aa11.57□□□□□ -0.56
SMG6-201ENST00000263073 ARSDP51689 593 aa11.57□□□□□ -0.56
SMG6-201ENST00000263073 RELAQ04206 551 aa11.57□□□□□ -0.56
SMG6-201ENST00000263073 ARHGAP1Q07960 439 aa11.57□□□□□ -0.56
SMG6-201ENST00000263073 SNED1Q8TER0 1413 aa11.57□□□□□ -0.56
SMG6-201ENST00000263073 FZD3Q9NPG1 666 aa11.57□□□□□ -0.56
SMG6-201ENST00000263073 ZDHHC4Q9NPG8 344 aa11.57□□□□□ -0.56
SMG6-201ENST00000263073 A0A096LPI6 279 aa11.57□□□□□ -0.56
SMG6-201ENST00000263073 FAM171A2A8MVW0 826 aa11.57□□□□□ -0.56
SMG6-201ENST00000263073 RBBP9O75884 186 aa11.57□□□□□ -0.56
SMG6-201ENST00000263073 PVALBP20472 110 aaPredicted RBP11.57□□□□□ -0.56
SMG6-201ENST00000263073 FOXA1P55317 472 aa11.57□□□□□ -0.56
SMG6-201ENST00000263073 NRG3P56975 720 aa11.57□□□□□ -0.56
SMG6-201ENST00000263073 SLC26A5P58743 744 aa11.57□□□□□ -0.56
SMG6-201ENST00000263073 TRAM2Q15035 370 aa11.57□□□□□ -0.56
SMG6-201ENST00000263073 CES4AQ5XG92 561 aa11.57□□□□□ -0.56
SMG6-201ENST00000263073 SLC27A4Q6P1M0 643 aa11.57□□□□□ -0.56
SMG6-201ENST00000263073 LRRTM4Q86VH4 590 aa11.57□□□□□ -0.56
SMG6-201ENST00000263073 TMEM126BQ8IUX1 230 aa11.57□□□□□ -0.56
SMG6-201ENST00000263073 OR51L1Q8NGJ5 315 aa11.57□□□□□ -0.56
SMG6-201ENST00000263073 SYNPO2LQ9H987 977 aa11.57□□□□□ -0.56
SMG6-201ENST00000263073 AIG1Q9NVV5 245 aa11.57□□□□□ -0.56
SMG6-201ENST00000263073 EMC3Q9P0I2 261 aa11.57□□□□□ -0.56
SMG6-201ENST00000263073 PIGRP01833 764 aa11.57□□□□□ -0.56
SMG6-201ENST00000263073 PRKACAP17612 351 aa11.57□□□□□ -0.56
SMG6-201ENST00000263073 AK4P27144 223 aaPredicted RBP11.57□□□□□ -0.56
SMG6-201ENST00000263073 SLC6A6P31641 620 aa11.57□□□□□ -0.56
SMG6-201ENST00000263073 HNF1BP35680 557 aa11.57□□□□□ -0.56
SMG6-201ENST00000263073 CRISP1P54107 249 aa11.57□□□□□ -0.56
SMG6-201ENST00000263073 FAM110CQ1W6H9 321 aa11.57□□□□□ -0.56
SMG6-201ENST00000263073 BLOC1S3Q6QNY0 202 aa11.57□□□□□ -0.56
SMG6-201ENST00000263073 ZSWIM9Q86XI8 627 aa11.57□□□□□ -0.56
SMG6-201ENST00000263073 TEX19Q8NA77 164 aa11.57□□□□□ -0.56
SMG6-201ENST00000263073 BORCS6Q96GS4 357 aa11.57□□□□□ -0.56
SMG6-201ENST00000263073 ZNF599Q96NL3 588 aa11.57□□□□□ -0.56
SMG6-201ENST00000263073 IL12RB2Q99665 862 aa11.57□□□□□ -0.56
SMG6-201ENST00000263073 OR51E2Q9H255 320 aa11.57□□□□□ -0.56
SMG6-201ENST00000263073 CD93Q9NPY3 652 aa11.57□□□□□ -0.56
SMG6-201ENST00000263073 YIPF1Q9Y548 306 aa11.57□□□□□ -0.56
SMG6-201ENST00000263073 A6NHS1 94 aa11.57□□□□□ -0.56
SMG6-201ENST00000263073 KCNJ13O60928 360 aa11.57□□□□□ -0.56
SMG6-201ENST00000263073 ARSAP15289 507 aa11.57□□□□□ -0.56
SMG6-201ENST00000263073 SSTR2P30874 369 aa11.57□□□□□ -0.56
SMG6-201ENST00000263073 HOXD12P35452 270 aa11.57□□□□□ -0.56
SMG6-201ENST00000263073 NIPAL4Q0D2K0 466 aa11.57□□□□□ -0.56
SMG6-201ENST00000263073 SNTB2Q13425 540 aaKnown RBP11.57□□□□□ -0.56
SMG6-201ENST00000263073 SERINC3Q13530 473 aa11.57□□□□□ -0.56
SMG6-201ENST00000263073 Q6ZVL8 140 aa11.57□□□□□ -0.56
SMG6-201ENST00000263073 RELL1Q8IUW5 271 aa11.57□□□□□ -0.56
SMG6-201ENST00000263073 THAP3Q8WTV1 239 aaPredicted RBP11.57□□□□□ -0.56
SMG6-201ENST00000263073 ASF1BQ9NVP2 202 aa11.57□□□□□ -0.56
SMG6-201ENST00000263073 TRBV2A0A0J9YWF9 115 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 CAPN14A8MX76 684 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 S1PR4O95977 384 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 THEGLP0DJG4 465 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 GNRHRP30968 328 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 HTR6P50406 440 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 PAGE3Q5JUK9 113 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 KBTBD6Q86V97 674 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 OR4N5Q8IXE1 308 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 SLC44A3Q8N4M1 653 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 Q8N9G6 341 aaPredicted RBP11.56□□□□□ -0.56
SMG6-201ENST00000263073 IGSF8Q969P0 613 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 ZNF486Q96H40 463 aaPredicted RBP11.56□□□□□ -0.56
SMG6-201ENST00000263073 ZNF382Q96SR6 550 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 NAA50Q9GZZ1 169 aaKnown RBP11.56□□□□□ -0.56
SMG6-201ENST00000263073 AGPAT2O15120 278 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 TSPAN6O43657 245 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 RGS9O75916 674 aaPredicted RBP11.56□□□□□ -0.56
SMG6-201ENST00000263073 HAPLN1P10915 354 aaPredicted RBP11.56□□□□□ -0.56
SMG6-201ENST00000263073 UQCRC2P22695 453 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 KDELR2P33947 212 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 GABRA3P34903 492 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 FLYWCH1Q4VC44 716 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 BEST3Q8N1M1 668 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 MTG2Q9H4K7 406 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 B4GALT6Q9UBX8 382 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 PCDHGB6Q9Y5F9 930 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 NUAK1O60285 661 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 PRAMEF11O60813 436 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 BCAS1O75363 584 aaPredicted RBP11.56□□□□□ -0.56
SMG6-201ENST00000263073 CBSLP0DN79 551 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 CD9P21926 228 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms