RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 CBSLP0DN79 551 aa15.2■□□□□ 0.02
SHANK3-201ENST00000262795 CBSP35520 551 aa15.2■□□□□ 0.02
SHANK3-201ENST00000262795 UBXN10Q96LJ8 280 aa15.2■□□□□ 0.02
SHANK3-201ENST00000262795 SMURF2Q9HAU4 748 aa15.2■□□□□ 0.02
SHANK3-201ENST00000262795 DECR2Q9NUI1 292 aa15.2■□□□□ 0.02
SHANK3-201ENST00000262795 ANKMY1Q9P2S6 941 aa15.2■□□□□ 0.02
SHANK3-201ENST00000262795 A8MV72 311 aaPredicted RBP15.19■□□□□ 0.02
SHANK3-201ENST00000262795 TBPL1P62380 186 aa15.19■□□□□ 0.02
SHANK3-201ENST00000262795 VRK1Q99986 396 aaPredicted RBP15.19■□□□□ 0.02
SHANK3-201ENST00000262795 AIFM2Q9BRQ8 373 aa15.19■□□□□ 0.02
SHANK3-201ENST00000262795 RLN2P04090 185 aa15.19■□□□□ 0.02
SHANK3-201ENST00000262795 CHRNB2P17787 502 aa15.19■□□□□ 0.02
SHANK3-201ENST00000262795 RIDAP52758 137 aaKnown RBP15.19■□□□□ 0.02
SHANK3-201ENST00000262795 KLF10Q13118 480 aa15.19■□□□□ 0.02
SHANK3-201ENST00000262795 SERINC3Q13530 473 aa15.19■□□□□ 0.02
SHANK3-201ENST00000262795 BATFQ16520 125 aa15.19■□□□□ 0.02
SHANK3-201ENST00000262795 ACSBG2Q5FVE4 666 aa15.19■□□□□ 0.02
SHANK3-201ENST00000262795 ZNF641Q96N77 438 aaPredicted RBP15.19■□□□□ 0.02
SHANK3-201ENST00000262795 RTKNQ9BST9 563 aa15.19■□□□□ 0.02
SHANK3-201ENST00000262795 CITO14578 2027 aa15.19■□□□□ 0.02
SHANK3-201ENST00000262795 ALOX15BO15296 676 aa15.19■□□□□ 0.02
SHANK3-201ENST00000262795 BMP4P12644 408 aa15.19■□□□□ 0.02
SHANK3-201ENST00000262795 EEFSECP57772 596 aaKnown RBP15.19■□□□□ 0.02
SHANK3-201ENST00000262795 LACTB2Q53H82 288 aaPredicted RBP15.19■□□□□ 0.02
SHANK3-201ENST00000262795 OR10G2Q8NGC3 310 aa15.19■□□□□ 0.02
SHANK3-201ENST00000262795 SLC6A15Q9H2J7 730 aa15.19■□□□□ 0.02
SHANK3-201ENST00000262795 PCDHGA2Q9Y5H1 932 aa15.19■□□□□ 0.02
SHANK3-201ENST00000262795 NOTOA8MTQ0 251 aa15.19■□□□□ 0.02
SHANK3-201ENST00000262795 TPOP07202 933 aa15.19■□□□□ 0.02
SHANK3-201ENST00000262795 GADD45AP24522 165 aa15.19■□□□□ 0.02
SHANK3-201ENST00000262795 NAA10P41227 235 aaPredicted RBP15.19■□□□□ 0.02
SHANK3-201ENST00000262795 FRMD7Q6ZUT3 714 aa15.19■□□□□ 0.02
SHANK3-201ENST00000262795 WDR20Q8TBZ3 569 aa15.19■□□□□ 0.02
SHANK3-201ENST00000262795 KCNN1Q92952 543 aa15.19■□□□□ 0.02
SHANK3-201ENST00000262795 MUCL1Q96DR8 90 aa15.19■□□□□ 0.02
SHANK3-201ENST00000262795 SALL3Q9BXA9 1300 aa15.19■□□□□ 0.02
SHANK3-201ENST00000262795 TCRBV7S3A2A0A539 114 aa15.19■□□□□ 0.02
SHANK3-201ENST00000262795 SHOXO15266 292 aa15.19■□□□□ 0.02
SHANK3-201ENST00000262795 SCGB2A1O75556 95 aa15.19■□□□□ 0.02
SHANK3-201ENST00000262795 ANGPTL1O95841 491 aa15.19■□□□□ 0.02
SHANK3-201ENST00000262795 DOC2AQ14183 400 aa15.19■□□□□ 0.02
SHANK3-201ENST00000262795 PPP1R3BQ86XI6 285 aa15.19■□□□□ 0.02
SHANK3-201ENST00000262795 PHC2Q8IXK0 858 aa15.19■□□□□ 0.02
SHANK3-201ENST00000262795 AQP11Q8NBQ7 271 aa15.19■□□□□ 0.02
SHANK3-201ENST00000262795 PIP5K1AQ99755 562 aa15.19■□□□□ 0.02
SHANK3-201ENST00000262795 ABCG2Q9UNQ0 655 aa15.19■□□□□ 0.02
SHANK3-201ENST00000262795 MYO10Q9HD67 2058 aa15.18■□□□□ 0.02
SHANK3-201ENST00000262795 ARPC2O15144 300 aa15.18■□□□□ 0.02
SHANK3-201ENST00000262795 PRAMEF11O60813 436 aa15.18■□□□□ 0.02
SHANK3-201ENST00000262795 CD9P21926 228 aa15.18■□□□□ 0.02
SHANK3-201ENST00000262795 IL1R2P27930 398 aa15.18■□□□□ 0.02
SHANK3-201ENST00000262795 DEFB109BQ30KR1 87 aa15.18■□□□□ 0.02
SHANK3-201ENST00000262795 TRABD2AQ86V40 505 aa15.18■□□□□ 0.02
SHANK3-201ENST00000262795 SNX29P2Q8IUI4 249 aa15.18■□□□□ 0.02
SHANK3-201ENST00000262795 TRAM1L1Q8N609 369 aa15.18■□□□□ 0.02
SHANK3-201ENST00000262795 HCFC2Q9Y5Z7 792 aa15.18■□□□□ 0.02
SHANK3-201ENST00000262795 FAM240BA0A1B0GVZ2 78 aa15.18■□□□□ 0.02
SHANK3-201ENST00000262795 TMEM233B4DJY2 109 aa15.18■□□□□ 0.02
SHANK3-201ENST00000262795 GABRDO14764 452 aa15.18■□□□□ 0.02
SHANK3-201ENST00000262795 FSCN2O14926 492 aa15.18■□□□□ 0.02
SHANK3-201ENST00000262795 COL6A2P12110 1019 aa15.18■□□□□ 0.02
SHANK3-201ENST00000262795 HERVK_113P63132 956 aa15.18■□□□□ 0.02
SHANK3-201ENST00000262795 DTX3Q8N9I9 347 aa15.18■□□□□ 0.02
SHANK3-201ENST00000262795 CPNE2Q96FN4 548 aaPredicted RBP15.18■□□□□ 0.02
SHANK3-201ENST00000262795 BARD1Q99728 777 aaKnown RBP15.18■□□□□ 0.02
SHANK3-201ENST00000262795 ERVK-6Q9BXR3 956 aa15.18■□□□□ 0.02
SHANK3-201ENST00000262795 ZNF395Q9H8N7 513 aaPredicted RBP15.18■□□□□ 0.02
SHANK3-201ENST00000262795 TNFRSF10DQ9UBN6 386 aa15.18■□□□□ 0.02
SHANK3-201ENST00000262795 MCTS1Q9ULC4 181 aaKnown RBP15.18■□□□□ 0.02
SHANK3-201ENST00000262795 CACNA1FO60840 1977 aa15.18■□□□□ 0.02
SHANK3-201ENST00000262795 EGFP01133 1207 aa15.18■□□□□ 0.02
SHANK3-201ENST00000262795 H1F0P07305 194 aaKnown RBP15.18■□□□□ 0.02
SHANK3-201ENST00000262795 KCNE1P15382 129 aa15.18■□□□□ 0.02
SHANK3-201ENST00000262795 VAMP1P23763 118 aa15.18■□□□□ 0.02
SHANK3-201ENST00000262795 LEPRP48357 1165 aaKnown RBP15.18■□□□□ 0.02
SHANK3-201ENST00000262795 RPS26P62854 115 aaKnown RBP15.18■□□□□ 0.02
SHANK3-201ENST00000262795 ABRAXAS2Q15018 415 aa15.18■□□□□ 0.02
SHANK3-201ENST00000262795 SF3B4Q15427 424 aaKnown RBP eCLIP15.18■□□□□ 0.021e-6■■□□□ 12.8
SHANK3-201ENST00000262795 ZADH2Q8N4Q0 377 aa15.18■□□□□ 0.02
SHANK3-201ENST00000262795 AGXT2Q9BYV1 514 aa15.18■□□□□ 0.02
SHANK3-201ENST00000262795 ZNF442Q9H7R0 627 aa15.18■□□□□ 0.02
SHANK3-201ENST00000262795 TFPTP0C1Z6 253 aa15.18■□□□□ 0.02
SHANK3-201ENST00000262795 TFB2MQ9H5Q4 396 aaKnown RBP15.18■□□□□ 0.02
SHANK3-201ENST00000262795 MVB12BQ9H7P6 319 aa15.18■□□□□ 0.02
SHANK3-201ENST00000262795 GJE1A6NN92 205 aa15.18■□□□□ 0.02
SHANK3-201ENST00000262795 PRPS1L1P21108 318 aa15.18■□□□□ 0.02
SHANK3-201ENST00000262795 NKPD1Q17RQ9 610 aa15.18■□□□□ 0.02
SHANK3-201ENST00000262795 ASB18Q6ZVZ8 466 aa15.18■□□□□ 0.02
SHANK3-201ENST00000262795 LARP4Q71RC2 724 aaKnown RBP eCLIP15.18■□□□□ 0.02
SHANK3-201ENST00000262795 OR2L2Q8NH16 312 aa15.18■□□□□ 0.02
SHANK3-201ENST00000262795 SLC25A44Q96H78 314 aaPredicted RBP15.18■□□□□ 0.02
SHANK3-201ENST00000262795 ERMAPQ96PL5 475 aaPredicted RBP15.18■□□□□ 0.02
SHANK3-201ENST00000262795 ZNF471Q9BX82 626 aaPredicted RBP15.18■□□□□ 0.02
SHANK3-201ENST00000262795 ZNF700Q9H0M5 742 aa15.18■□□□□ 0.02
SHANK3-201ENST00000262795 A0A0A6YYC8 382 aaPredicted RBP15.18■□□□□ 0.02
SHANK3-201ENST00000262795 C17orf105B2RV13 164 aa15.18■□□□□ 0.02
SHANK3-201ENST00000262795 I3L1I5 382 aaPredicted RBP15.18■□□□□ 0.02
SHANK3-201ENST00000262795 PON3Q15166 354 aa15.18■□□□□ 0.02
SHANK3-201ENST00000262795 ARL5BQ96KC2 179 aa15.18■□□□□ 0.02
SHANK3-201ENST00000262795 TMEM74Q96NL1 305 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms