RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 VSTM5A8MXK1 200 aa11.6□□□□□ -0.55
COL8A1-201ENST00000261037 FLRT2O43155 660 aa11.6□□□□□ -0.55
COL8A1-201ENST00000261037 KCNJ13O60928 360 aa11.6□□□□□ -0.55
COL8A1-201ENST00000261037 CPNE6O95741 557 aa11.6□□□□□ -0.55
COL8A1-201ENST00000261037 GSRP00390 522 aa11.6□□□□□ -0.55
COL8A1-201ENST00000261037 JUNDP17535 347 aa11.6□□□□□ -0.55
COL8A1-201ENST00000261037 PON2Q15165 354 aa11.6□□□□□ -0.55
COL8A1-201ENST00000261037 OR4D1Q15615 310 aa11.6□□□□□ -0.55
COL8A1-201ENST00000261037 FAM76BQ5HYJ3 339 aa11.6□□□□□ -0.55
COL8A1-201ENST00000261037 RAET1LQ5VY80 246 aa11.6□□□□□ -0.55
COL8A1-201ENST00000261037 DENND1AQ8TEH3 1009 aa11.6□□□□□ -0.55
COL8A1-201ENST00000261037 FCAMRQ8WWV6 532 aa11.6□□□□□ -0.55
COL8A1-201ENST00000261037 TRIB2Q92519 343 aa11.6□□□□□ -0.55
COL8A1-201ENST00000261037 MUS81Q96NY9 551 aa11.6□□□□□ -0.55
COL8A1-201ENST00000261037 C16orf70Q9BSU1 422 aa11.6□□□□□ -0.55
COL8A1-201ENST00000261037 STRADBQ9C0K7 418 aa11.6□□□□□ -0.55
COL8A1-201ENST00000261037 MRPL15Q9P015 296 aaKnown RBP11.6□□□□□ -0.55
COL8A1-201ENST00000261037 TMEM5Q9Y2B1 443 aa11.6□□□□□ -0.55
COL8A1-201ENST00000261037 LTBP3Q9NS15 1303 aa11.6□□□□□ -0.55
COL8A1-201ENST00000261037 NR2C1P13056 603 aa11.6□□□□□ -0.55
COL8A1-201ENST00000261037 GPR4P46093 362 aa11.6□□□□□ -0.55
COL8A1-201ENST00000261037 FNTBP49356 437 aa11.6□□□□□ -0.55
COL8A1-201ENST00000261037 TAS2R43P59537 309 aa11.6□□□□□ -0.55
COL8A1-201ENST00000261037 GALK2Q01415 458 aa11.6□□□□□ -0.55
COL8A1-201ENST00000261037 CHRFAM7AQ494W8 412 aa11.6□□□□□ -0.55
COL8A1-201ENST00000261037 ZNF404Q494X3 552 aa11.6□□□□□ -0.55
COL8A1-201ENST00000261037 SLC36A3Q495N2 470 aa11.6□□□□□ -0.55
COL8A1-201ENST00000261037 RAB11FIP2Q7L804 512 aa11.6□□□□□ -0.55
COL8A1-201ENST00000261037 CD300LFQ8TDQ1 290 aa11.6□□□□□ -0.55
COL8A1-201ENST00000261037 ZNF296Q8WUU4 475 aaPredicted RBP11.6□□□□□ -0.55
COL8A1-201ENST00000261037 OR5P2Q8WZ92 322 aa11.6□□□□□ -0.55
COL8A1-201ENST00000261037 MOAP1Q96BY2 351 aa11.6□□□□□ -0.55
COL8A1-201ENST00000261037 SLC2A13Q96QE2 648 aa11.6□□□□□ -0.55
COL8A1-201ENST00000261037 G6PC3Q9BUM1 346 aa11.6□□□□□ -0.55
COL8A1-201ENST00000261037 EXTL2Q9UBQ6 330 aa11.6□□□□□ -0.55
COL8A1-201ENST00000261037 NUFIP1Q9UHK0 495 aaKnown RBP11.6□□□□□ -0.55
COL8A1-201ENST00000261037 IFT52Q9Y366 437 aa11.6□□□□□ -0.55
COL8A1-201ENST00000261037 RGPD2P0DJD1 1756 aa11.6□□□□□ -0.55
COL8A1-201ENST00000261037 A0A096LPI6 279 aa11.6□□□□□ -0.55
COL8A1-201ENST00000261037 TEX13CA0A0J9YWL9 993 aa11.6□□□□□ -0.55
COL8A1-201ENST00000261037 EEF1E1O43324 174 aaKnown RBP11.6□□□□□ -0.55
COL8A1-201ENST00000261037 MAFKO60675 156 aa11.6□□□□□ -0.55
COL8A1-201ENST00000261037 SOCS5O75159 536 aa11.6□□□□□ -0.55
COL8A1-201ENST00000261037 MPC1LP0DKB6 136 aa11.6□□□□□ -0.55
COL8A1-201ENST00000261037 GTF2F2P13984 249 aa11.6□□□□□ -0.55
COL8A1-201ENST00000261037 TIA1P31483 386 aaKnown RBP eCLIP11.6□□□□□ -0.55
COL8A1-201ENST00000261037 KCNC1P48547 511 aa11.6□□□□□ -0.55
COL8A1-201ENST00000261037 ST3GAL4Q11206 333 aa11.6□□□□□ -0.55
COL8A1-201ENST00000261037 BTBD16Q32M84 506 aa11.6□□□□□ -0.55
COL8A1-201ENST00000261037 ZNF550Q7Z398 422 aa11.6□□□□□ -0.55
COL8A1-201ENST00000261037 PIP5K1AQ99755 562 aa11.6□□□□□ -0.55
COL8A1-201ENST00000261037 C14orf119Q9NWQ9 140 aa11.6□□□□□ -0.55
COL8A1-201ENST00000261037 RNF186Q9NXI6 227 aa11.6□□□□□ -0.55
COL8A1-201ENST00000261037 TUBA8Q9NY65 449 aaPredicted RBP11.6□□□□□ -0.55
COL8A1-201ENST00000261037 A6NCN8 305 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 SFTPBP07988 381 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 PEPDP12955 493 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 DNAJB1P25685 340 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 ACVR1BP36896 505 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 LEPRP48357 1165 aaKnown RBP11.59□□□□□ -0.55
COL8A1-201ENST00000261037 ARSFP54793 590 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 OR4D2P58180 307 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 GRIK2Q13002 908 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 RNF111Q6ZNA4 994 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 USP53Q70EK8 1073 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 NLGN4YQ8NFZ3 816 aaPredicted RBP11.59□□□□□ -0.55
COL8A1-201ENST00000261037 OR4C15Q8NGM1 316 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 KIAA1143Q96AT1 154 aaPredicted RBP11.59□□□□□ -0.55
COL8A1-201ENST00000261037 FAM210AQ96ND0 272 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 NANSQ9NR45 359 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 DHDHQ9UQ10 334 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 PCDHB3Q9Y5E6 796 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 TUBG1P23258 451 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 AK4P27144 223 aaPredicted RBP11.59□□□□□ -0.55
COL8A1-201ENST00000261037 SRYQ05066 204 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 CDK10Q15131 360 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 ATP6AP1Q15904 470 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 ARSKQ6UWY0 536 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 LHFPL3Q86UP9 236 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 ZSWIM9Q86XI8 627 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 ZDHHC14Q8IZN3 488 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 WDTC1Q8N5D0 677 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 COQ8AQ8NI60 647 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 RAD9AQ99638 391 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 NKX2-4Q9H2Z4 354 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 FANCFQ9NPI8 374 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 KDM3BQ7LBC6 1761 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 A0A0U1RQS6 177 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 A0A1W2PPW3 197 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 LRRN3E7EW58 273 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 YES1P07947 543 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 PFKMP08237 780 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 F8A1P23610 371 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 ZFAND4Q86XD8 727 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 TP53INP2Q8IXH6 220 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 OR52P1PQ8NH57 321 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 STOML3Q8TAV4 291 aa11.59□□□□□ -0.55
COL8A1-201ENST00000261037 AKAP1Q92667 903 aaKnown RBP eCLIP11.59□□□□□ -0.55
COL8A1-201ENST00000261037 CPNE2Q96FN4 548 aaPredicted RBP11.59□□□□□ -0.55
COL8A1-201ENST00000261037 DPH7Q9BTV6 452 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms