RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 GPN3Q9UHW5 284 aaPredicted RBP14.86□□□□□ -0.03
CCDC90B-201ENST00000260054 UTS2RQ9UKP6 389 aa14.86□□□□□ -0.03
CCDC90B-201ENST00000260054 MKL2Q9ULH7 1088 aa14.86□□□□□ -0.03
CCDC90B-201ENST00000260054 CAPN7Q9Y6W3 813 aa14.86□□□□□ -0.03
CCDC90B-201ENST00000260054 ASPMQ8IZT6 3477 aa14.86□□□□□ -0.03
CCDC90B-201ENST00000260054 FAM234BA2RU67 622 aa14.85□□□□□ -0.03
CCDC90B-201ENST00000260054 BLACEA4D250 179 aa14.85□□□□□ -0.03
CCDC90B-201ENST00000260054 TGFBR3LH3BV60 316 aa14.85□□□□□ -0.03
CCDC90B-201ENST00000260054 CLDN4O14493 209 aa14.85□□□□□ -0.03
CCDC90B-201ENST00000260054 ERAL1O75616 437 aaKnown RBP14.85□□□□□ -0.03
CCDC90B-201ENST00000260054 RECKO95980 971 aa14.85□□□□□ -0.03
CCDC90B-201ENST00000260054 MAOAP21397 527 aa14.85□□□□□ -0.03
CCDC90B-201ENST00000260054 ADSLP30566 484 aaPredicted RBP14.85□□□□□ -0.03
CCDC90B-201ENST00000260054 RPL3P39023 403 aaKnown RBP14.85□□□□□ -0.03
CCDC90B-201ENST00000260054 POLR2JP52435 117 aaKnown RBP14.85□□□□□ -0.03
CCDC90B-201ENST00000260054 DGKQP52824 942 aa14.85□□□□□ -0.03
CCDC90B-201ENST00000260054 HSD17B7P56937 341 aa14.85□□□□□ -0.03
CCDC90B-201ENST00000260054 RHAGQ02094 409 aa14.85□□□□□ -0.03
CCDC90B-201ENST00000260054 ID2Q02363 134 aa14.85□□□□□ -0.03
CCDC90B-201ENST00000260054 FOLH1Q04609 750 aa14.85□□□□□ -0.03
CCDC90B-201ENST00000260054 SLC13A2Q13183 592 aa14.85□□□□□ -0.03
CCDC90B-201ENST00000260054 RCAN2Q14206 197 aa14.85□□□□□ -0.03
CCDC90B-201ENST00000260054 ZNF750Q32MQ0 723 aa14.85□□□□□ -0.03
CCDC90B-201ENST00000260054 PGS1Q32NB8 556 aa14.85□□□□□ -0.03
CCDC90B-201ENST00000260054 CPTPQ5TA50 214 aa14.85□□□□□ -0.03
CCDC90B-201ENST00000260054 MFSD4BQ5TF39 518 aa14.85□□□□□ -0.03
CCDC90B-201ENST00000260054 GK5Q6ZS86 529 aa14.85□□□□□ -0.03
CCDC90B-201ENST00000260054 R3HCC1LQ7Z5L2 792 aaKnown RBP14.85□□□□□ -0.03
CCDC90B-201ENST00000260054 TREML1Q86YW5 311 aa14.85□□□□□ -0.03
CCDC90B-201ENST00000260054 FITM2Q8N6M3 262 aa14.85□□□□□ -0.03
CCDC90B-201ENST00000260054 ENDOVQ8N8Q3 282 aaKnown RBP14.85□□□□□ -0.03
CCDC90B-201ENST00000260054 GLB1L3Q8NCI6 653 aaPredicted RBP14.85□□□□□ -0.03
CCDC90B-201ENST00000260054 STARD8Q92502 1023 aa14.85□□□□□ -0.03
CCDC90B-201ENST00000260054 NKD1Q969G9 470 aa14.85□□□□□ -0.03
CCDC90B-201ENST00000260054 KLHL29Q96CT2 875 aa14.85□□□□□ -0.03
CCDC90B-201ENST00000260054 COQ8BQ96D53 544 aa14.85□□□□□ -0.03
CCDC90B-201ENST00000260054 ERP27Q96DN0 273 aa14.85□□□□□ -0.03
CCDC90B-201ENST00000260054 CNRIP1Q96F85 164 aaPredicted RBP14.85□□□□□ -0.03
CCDC90B-201ENST00000260054 ZNF578Q96N58 590 aaPredicted RBP14.85□□□□□ -0.03
CCDC90B-201ENST00000260054 ZBTB18Q99592 522 aa14.85□□□□□ -0.03
CCDC90B-201ENST00000260054 VN1R1Q9GZP7 353 aa14.85□□□□□ -0.03
CCDC90B-201ENST00000260054 WDR54Q9H977 334 aa14.85□□□□□ -0.03
CCDC90B-201ENST00000260054 NECTIN3Q9NQS3 549 aa14.85□□□□□ -0.03
CCDC90B-201ENST00000260054 MRGBPQ9NV56 204 aa14.85□□□□□ -0.03
CCDC90B-201ENST00000260054 CROTQ9UKG9 612 aa14.85□□□□□ -0.03
CCDC90B-201ENST00000260054 MAPRE3Q9UPY8 281 aa14.85□□□□□ -0.03
CCDC90B-201ENST00000260054 LOC101059948A0A1B0GTJ6 334 aa14.84□□□□□ -0.03
CCDC90B-201ENST00000260054 MYOCOSA0A1B0GUC4 107 aa14.84□□□□□ -0.03
CCDC90B-201ENST00000260054 TERTO14746 1132 aaKnown RBP14.84□□□□□ -0.03
CCDC90B-201ENST00000260054 CTNSO60931 367 aa14.84□□□□□ -0.03
CCDC90B-201ENST00000260054 KLF7O75840 302 aaPredicted RBP14.84□□□□□ -0.03
CCDC90B-201ENST00000260054 C8orf89P0DMQ9 161 aa14.84□□□□□ -0.03
CCDC90B-201ENST00000260054 PHC1P78364 1004 aa14.84□□□□□ -0.03
CCDC90B-201ENST00000260054 TGIF1Q15583 401 aa14.84□□□□□ -0.03
CCDC90B-201ENST00000260054 OR4F3Q6IEY1 312 aa14.84□□□□□ -0.03
CCDC90B-201ENST00000260054 BLOC1S3Q6QNY0 202 aa14.84□□□□□ -0.03
CCDC90B-201ENST00000260054 QSOX2Q6ZRP7 698 aa14.84□□□□□ -0.03
CCDC90B-201ENST00000260054 OR8J2Q8NGG1 315 aa14.84□□□□□ -0.03
CCDC90B-201ENST00000260054 CIDECQ96AQ7 238 aaPredicted RBP14.84□□□□□ -0.03
CCDC90B-201ENST00000260054 PRPF18Q99633 342 aaKnown RBP14.84□□□□□ -0.03
CCDC90B-201ENST00000260054 SLC52A3Q9NQ40 469 aa14.84□□□□□ -0.03
CCDC90B-201ENST00000260054 SLC35C2Q9NQQ7 365 aa14.84□□□□□ -0.03
CCDC90B-201ENST00000260054 TMEM45AQ9NWC5 275 aa14.84□□□□□ -0.03
CCDC90B-201ENST00000260054 NXT1Q9UKK6 140 aaKnown RBP14.84□□□□□ -0.03
CCDC90B-201ENST00000260054 MMACHCQ9Y4U1 282 aa14.84□□□□□ -0.03
CCDC90B-201ENST00000260054 CCDC88CQ9P219 2028 aa14.84□□□□□ -0.03
CCDC90B-201ENST00000260054 IGKV3D-11A0A0A0MRZ8 115 aa14.84□□□□□ -0.03
CCDC90B-201ENST00000260054 CAPN14A8MX76 684 aa14.84□□□□□ -0.03
CCDC90B-201ENST00000260054 IDSB3KWA1 339 aa14.84□□□□□ -0.03
CCDC90B-201ENST00000260054 NR5A2O00482 541 aa14.84□□□□□ -0.03
CCDC90B-201ENST00000260054 SLC22A2O15244 555 aa14.84□□□□□ -0.03
CCDC90B-201ENST00000260054 PGRP06401 933 aa14.84□□□□□ -0.03
CCDC90B-201ENST00000260054 LIPCP11150 499 aa14.84□□□□□ -0.03
CCDC90B-201ENST00000260054 CAPN3P20807 821 aa14.84□□□□□ -0.03
CCDC90B-201ENST00000260054 EFNA1P20827 205 aaPredicted RBP14.84□□□□□ -0.03
CCDC90B-201ENST00000260054 F8A1P23610 371 aa14.84□□□□□ -0.03
CCDC90B-201ENST00000260054 KIR3DL1P43629 444 aa14.84□□□□□ -0.03
CCDC90B-201ENST00000260054 WNT3P56703 355 aa14.84□□□□□ -0.03
CCDC90B-201ENST00000260054 SRSF11Q05519 484 aaKnown RBP14.84□□□□□ -0.03
CCDC90B-201ENST00000260054 DUSP2Q05923 314 aa14.84□□□□□ -0.03
CCDC90B-201ENST00000260054 DPY19L1Q2PZI1 675 aa14.84□□□□□ -0.03
CCDC90B-201ENST00000260054 TBC1D25Q3MII6 688 aa14.84□□□□□ -0.03
CCDC90B-201ENST00000260054 OR4K14Q8NGD5 310 aa14.84□□□□□ -0.03
CCDC90B-201ENST00000260054 TSLPQ969D9 159 aa14.84□□□□□ -0.03
CCDC90B-201ENST00000260054 VPS33AQ96AX1 596 aa14.84□□□□□ -0.03
CCDC90B-201ENST00000260054 ZNF681Q96N22 645 aa14.84□□□□□ -0.03
CCDC90B-201ENST00000260054 PTCHD1Q96NR3 888 aa14.84□□□□□ -0.03
CCDC90B-201ENST00000260054 DUSP26Q9BV47 211 aa14.84□□□□□ -0.03
CCDC90B-201ENST00000260054 SLAMF7Q9NQ25 335 aa14.84□□□□□ -0.03
CCDC90B-201ENST00000260054 PSME2Q9UL46 239 aa14.84□□□□□ -0.03
CCDC90B-201ENST00000260054 RRP15Q9Y3B9 282 aaKnown RBP14.84□□□□□ -0.03
CCDC90B-201ENST00000260054 NUP210LQ5VU65 1888 aa14.83□□□□□ -0.03
CCDC90B-201ENST00000260054 CROCCQ5TZA2 2017 aa14.83□□□□□ -0.04
CCDC90B-201ENST00000260054 SCN2BO60939 215 aa14.83□□□□□ -0.04
CCDC90B-201ENST00000260054 GPR75O95800 540 aa14.83□□□□□ -0.04
CCDC90B-201ENST00000260054 IL6P05231 212 aa14.83□□□□□ -0.04
CCDC90B-201ENST00000260054 RAB40ALP0C0E4 278 aa14.83□□□□□ -0.04
CCDC90B-201ENST00000260054 PPP2R1BP30154 601 aa14.83□□□□□ -0.04
CCDC90B-201ENST00000260054 S100A3P33764 101 aa14.83□□□□□ -0.04
CCDC90B-201ENST00000260054 DLSTP36957 453 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms