RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 OR6C68A6NDL8 312 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 BTNL10A8MVZ5 291 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 DLGAP1O14490 977 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 TCF21O43680 179 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 LZTS3O60299 673 aaPredicted RBP7.41□□□□□ -1.22
GPNMB-201ENST00000258733 KDM4BO94953 1096 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 LDLRP01130 860 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 FGBP02675 491 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 THBS1P07996 1170 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 HTR1AP08908 422 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 LCP1P13796 627 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 CD19P15391 556 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 HOXC8P31273 242 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 CHRNA3P32297 505 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 NRIP1P48552 1158 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 CASP7P55210 303 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 MAD2L1Q13257 205 aaPredicted RBP7.41□□□□□ -1.22
GPNMB-201ENST00000258733 ARL6IP1Q15041 203 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 RNF151Q2KHN1 245 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 ABLIM2Q6H8Q1 611 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 VWA1Q6PCB0 445 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 DPPA4Q7L190 304 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 THAP5Q7Z6K1 395 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 B3GNT8Q7Z7M8 397 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 ZNF679Q8IYX0 411 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 DHRSXQ8N5I4 330 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 SLC44A5Q8NCS7 719 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 ASB15Q8WXK1 588 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 EXTL1Q92935 676 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 FBXL20Q96IG2 436 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 NPAS2Q99743 824 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 MECRQ9BV79 373 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 SMOC1Q9H4F8 434 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 TSPAN16Q9UKR8 245 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 ZNRF3Q9ULT6 936 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 PCDHB11Q9Y5F2 797 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 A3GALT2U3KPV4 340 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 TRPM3Q9HCF6 1732 aaPredicted RBP7.4□□□□□ -1.22
GPNMB-201ENST00000258733 SPATA31A1Q5TZJ5 1347 aa7.4□□□□□ -1.22
GPNMB-201ENST00000258733 SPATA31A5Q5VU36 1347 aa7.4□□□□□ -1.22
GPNMB-201ENST00000258733 SPATA31A7Q8IWB4 1347 aa7.4□□□□□ -1.22
GPNMB-201ENST00000258733 IRS2Q9Y4H2 1338 aa7.4□□□□□ -1.22
GPNMB-201ENST00000258733 LNP1A1A4G5 178 aa7.4□□□□□ -1.22
GPNMB-201ENST00000258733 CDRT15L2A8MXV6 281 aa7.4□□□□□ -1.22
GPNMB-201ENST00000258733 E5RJQ4 531 aa7.4□□□□□ -1.22
GPNMB-201ENST00000258733 PRR23D1E9PI22 279 aaPredicted RBP7.4□□□□□ -1.22
GPNMB-201ENST00000258733 C6orf229H3BNL8 230 aa7.4□□□□□ -1.22
GPNMB-201ENST00000258733 MKRN2OSH3BPM6 223 aa7.4□□□□□ -1.22
GPNMB-201ENST00000258733 M0R296 226 aa7.4□□□□□ -1.22
GPNMB-201ENST00000258733 SCN2BO60939 215 aa7.4□□□□□ -1.22
GPNMB-201ENST00000258733 CA11O75493 328 aa7.4□□□□□ -1.22
GPNMB-201ENST00000258733 SOD2P04179 222 aa7.4□□□□□ -1.22
GPNMB-201ENST00000258733 CLEC3BP05452 202 aa7.4□□□□□ -1.22
GPNMB-201ENST00000258733 UQCRFS1P1P0C7P4 283 aa7.4□□□□□ -1.22
GPNMB-201ENST00000258733 SLC35G4P0C7Q5 338 aa7.4□□□□□ -1.22
GPNMB-201ENST00000258733 PRR23D2P0DMB1 279 aaPredicted RBP7.4□□□□□ -1.22
GPNMB-201ENST00000258733 MAPTP10636 758 aaKnown RBP7.4□□□□□ -1.22
GPNMB-201ENST00000258733 TSPAN8P19075 237 aa7.4□□□□□ -1.22
GPNMB-201ENST00000258733 HOXA13P31271 388 aaPredicted RBP7.4□□□□□ -1.22
GPNMB-201ENST00000258733 NAA10P41227 235 aaPredicted RBP7.4□□□□□ -1.22
GPNMB-201ENST00000258733 YWHAHQ04917 246 aaPredicted RBP7.4□□□□□ -1.22
GPNMB-201ENST00000258733 FOXM1Q08050 763 aa7.4□□□□□ -1.22
GPNMB-201ENST00000258733 GAB1Q13480 694 aa7.4□□□□□ -1.22
GPNMB-201ENST00000258733 PRPSAP1Q14558 356 aa7.4□□□□□ -1.22
GPNMB-201ENST00000258733 SURF1Q15526 300 aa7.4□□□□□ -1.22
GPNMB-201ENST00000258733 SPANXN2Q5MJ10 180 aa7.4□□□□□ -1.22
GPNMB-201ENST00000258733 GPRC6AQ5T6X5 926 aa7.4□□□□□ -1.22
GPNMB-201ENST00000258733 CDPF1Q6NVV7 123 aa7.4□□□□□ -1.22
GPNMB-201ENST00000258733 ADAT2Q7Z6V5 191 aaKnown RBP7.4□□□□□ -1.22
GPNMB-201ENST00000258733 ISCA2Q86U28 154 aa7.4□□□□□ -1.22
GPNMB-201ENST00000258733 ZNF444Q8N0Y2 327 aaPredicted RBP7.4□□□□□ -1.22
GPNMB-201ENST00000258733 SYNE4Q8N205 404 aa7.4□□□□□ -1.22
GPNMB-201ENST00000258733 BEND2Q8NDZ0 799 aa7.4□□□□□ -1.22
GPNMB-201ENST00000258733 SEMA6DQ8NFY4 1073 aa7.4□□□□□ -1.22
GPNMB-201ENST00000258733 RXFP4Q8TDU9 374 aa7.4□□□□□ -1.22
GPNMB-201ENST00000258733 TM9SF4Q92544 642 aa7.4□□□□□ -1.22
GPNMB-201ENST00000258733 CDS1Q92903 461 aa7.4□□□□□ -1.22
GPNMB-201ENST00000258733 MRGPRX1Q96LB2 322 aa7.4□□□□□ -1.22
GPNMB-201ENST00000258733 CXorf58Q96LI9 332 aa7.4□□□□□ -1.22
GPNMB-201ENST00000258733 NDUFAF3Q9BU61 184 aa7.4□□□□□ -1.22
GPNMB-201ENST00000258733 DCSTAMPQ9H295 470 aa7.4□□□□□ -1.22
GPNMB-201ENST00000258733 DPEP2Q9H4A9 486 aa7.4□□□□□ -1.22
GPNMB-201ENST00000258733 PRMT7Q9NVM4 692 aaPredicted RBP7.4□□□□□ -1.22
GPNMB-201ENST00000258733 MS4A12Q9NXJ0 267 aa7.4□□□□□ -1.22
GPNMB-201ENST00000258733 CACNG4Q9UBN1 327 aa7.4□□□□□ -1.22
GPNMB-201ENST00000258733 NAGKQ9UJ70 344 aa7.4□□□□□ -1.22
GPNMB-201ENST00000258733 LEF1Q9UJU2 399 aaPredicted RBP7.4□□□□□ -1.22
GPNMB-201ENST00000258733 TANC1Q9C0D5 1861 aa7.4□□□□□ -1.22
GPNMB-201ENST00000258733 RREB1Q92766 1687 aa7.4□□□□□ -1.22
GPNMB-201ENST00000258733 YLPM1P49750 1951 aaKnown RBP7.4□□□□□ -1.23
GPNMB-201ENST00000258733 EXOC1LA0A1B0GW35 172 aa7.4□□□□□ -1.23
GPNMB-201ENST00000258733 SDR42E2A6NKP2 422 aa7.4□□□□□ -1.23
GPNMB-201ENST00000258733 B4DXG7 233 aa7.4□□□□□ -1.23
GPNMB-201ENST00000258733 GABRDO14764 452 aa7.4□□□□□ -1.23
GPNMB-201ENST00000258733 SLC16A4O15374 487 aa7.4□□□□□ -1.23
GPNMB-201ENST00000258733 CFLARO15519 480 aa7.4□□□□□ -1.23
GPNMB-201ENST00000258733 FABP7O15540 132 aa7.4□□□□□ -1.23
GPNMB-201ENST00000258733 FLRT2O43155 660 aa7.4□□□□□ -1.23
GPNMB-201ENST00000258733 GRID2O43424 1007 aa7.4□□□□□ -1.23
GPNMB-201ENST00000258733 LPLP06858 475 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms