RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 C1orf109Q9NX04 203 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 MRTO4Q9UKD2 239 aaKnown RBP6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 TBC1D30Q9Y2I9 924 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 HSPE1-MOB4S4R3N1 261 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 NID2Q14112 1375 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 CILPO75339 1184 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 OR5I1Q13606 314 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 ENPP2Q13822 863 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 SLC14A2Q15849 920 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 TMEM95Q3KNT9 176 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 SPANXN3Q5MJ09 141 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 LRFN4Q6PJG9 635 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 HIST2H3AQ71DI3 136 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 ZNF571Q7Z3V5 609 aaPredicted RBP6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 CERS5Q8N5B7 392 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 BANPQ8N9N5 519 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 CCDC54Q8NEL0 328 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 OR10A6Q8NH74 314 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 RAET1EQ8TD07 263 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 RSPRY1Q96DX4 576 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 SLC45A3Q96JT2 553 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 RHOVQ96L33 236 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 ARV1Q9H2C2 271 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 PLSCR2Q9NRY7 297 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 FBXO5Q9UKT4 447 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 SLC12A8A0AV02 714 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 MARCH11A6NNE9 402 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 RBAK-RBAKDNI3L0D1 243 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 WNT10BO00744 389 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 NSA2O95478 260 aaKnown RBP6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 SPOCK1Q08629 439 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 SLC17A1Q14916 467 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 RBBP7Q16576 425 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 PRAMEF14Q5SWL7 426 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 ASPGQ86U10 573 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 NPAS3Q8IXF0 933 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 KLHDC8BQ8IXV7 354 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 SAMD12Q8N8I0 201 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 NAT16Q8N8M0 369 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 OR6K3Q8NGY3 331 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 OR5K1Q8NHB7 308 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 DYRK2Q92630 601 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 PDXPQ96GD0 296 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 NECAB3Q96P71 396 aaPredicted RBP6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 EIF5A2Q9GZV4 153 aaKnown RBP6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 SLITRK2Q9H156 845 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 TOPORSQ9NS56 1045 aaPredicted RBP6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 NLE1Q9NVX2 485 aaPredicted RBP6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 PADI1Q9ULC6 663 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 LOC100130705A0A1B0GUX0 176 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 FAM234BA2RU67 622 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 METTL15P1P0C7V9 234 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 FGFR1P11362 822 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 JUNBP17275 347 aaPredicted RBP6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 CPT2P23786 658 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 SDC4P31431 198 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 EPHX2P34913 555 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 CD86P42081 329 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 SIM1P81133 766 aaPredicted RBP6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 OGDHQ02218 1023 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 ODF4Q2M2E3 257 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 IQCCQ4KMZ1 466 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 TFDP3Q5H9I0 405 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 BEX5Q5H9J7 111 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 ZNF667Q5HYK9 610 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 PRAMEF17Q5VTA0 474 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 PAMR1Q6UXH9 720 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 FAM83HQ6ZRV2 1179 aaPredicted RBP6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 ILDR1Q86SU0 546 aaPredicted RBP6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 GLRX5Q86SX6 157 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 LRRTM4Q86VH4 590 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 JAGN1Q8N5M9 183 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 CCNYQ8ND76 341 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 GTF3AQ92664 365 aaKnown RBP6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 SLC5A5Q92911 643 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 LRR1Q96L50 414 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 KREMEN1Q96MU8 473 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 TPPP3Q9BW30 176 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 OR52A5Q9H2C5 316 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 IL19Q9UHD0 177 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 SLC23A1Q9UHI7 598 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 ZDHHC2Q9UIJ5 367 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 WIF1Q9Y5W5 379 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 NEMP2A6NFY4 417 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 CREBL2O60519 120 aaPredicted RBP6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 CYB5R3P00387 301 aaPredicted RBP6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 ITGAVP06756 1048 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 ARSBP15848 533 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 CD247P20963 164 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 ICAM3P32942 547 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 CLCNKBP51801 687 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 GK3PQ14409 553 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 DMRTA1Q5VZB9 504 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 RNF180Q86T96 592 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 C12orf40Q86WS4 652 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 LIX1LQ8IVB5 337 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 OR2T11Q8NH01 316 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 FIBINQ8TAL6 211 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 TRAPPC12Q8WVT3 735 aa6.49□□□□□ -1.37
PDGFRA-201ENST00000257290 HAS1Q92839 578 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms