RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 PTGR1Q14914 329 aa13.24□□□□□ -0.29
VPS25-201ENST00000253794 TERF2Q15554 542 aa13.24□□□□□ -0.29
VPS25-201ENST00000253794 PDCD4Q53EL6 469 aaKnown RBP13.24□□□□□ -0.29
VPS25-201ENST00000253794 METTL21CQ5VZV1 264 aa13.24□□□□□ -0.29
VPS25-201ENST00000253794 NXNQ6DKJ4 435 aa13.24□□□□□ -0.29
VPS25-201ENST00000253794 SHISA6Q6ZSJ9 500 aa13.24□□□□□ -0.29
VPS25-201ENST00000253794 PPP1R32Q7Z5V6 425 aa13.24□□□□□ -0.29
VPS25-201ENST00000253794 CAMKMTQ7Z624 323 aa13.24□□□□□ -0.29
VPS25-201ENST00000253794 MTERF4Q7Z6M4 381 aaKnown RBP13.24□□□□□ -0.29
VPS25-201ENST00000253794 SAMD14Q8IZD0 417 aaPredicted RBP13.24□□□□□ -0.29
VPS25-201ENST00000253794 SNRNP27Q8WVK2 155 aaKnown RBP13.24□□□□□ -0.29
VPS25-201ENST00000253794 C10orf82Q8WW14 230 aa13.24□□□□□ -0.29
VPS25-201ENST00000253794 PTCHD1Q96NR3 888 aa13.24□□□□□ -0.29
VPS25-201ENST00000253794 TSSK3Q96PN8 268 aa13.24□□□□□ -0.29
VPS25-201ENST00000253794 TMEM120AQ9BXJ8 343 aa13.24□□□□□ -0.29
VPS25-201ENST00000253794 NSRP1Q9H0G5 558 aaKnown RBP13.24□□□□□ -0.29
VPS25-201ENST00000253794 REEP4Q9H6H4 257 aa13.24□□□□□ -0.29
VPS25-201ENST00000253794 NECTIN3Q9NQS3 549 aa13.24□□□□□ -0.29
VPS25-201ENST00000253794 SDR39U1Q9NRG7 319 aaPredicted RBP13.24□□□□□ -0.29
VPS25-201ENST00000253794 TMEM45AQ9NWC5 275 aa13.24□□□□□ -0.29
VPS25-201ENST00000253794 C19orf25Q9UFG5 118 aaPredicted RBP13.24□□□□□ -0.29
VPS25-201ENST00000253794 BAIAP2L1Q9UHR4 511 aa13.24□□□□□ -0.29
VPS25-201ENST00000253794 ATP6V1HQ9UI12 483 aa13.24□□□□□ -0.29
VPS25-201ENST00000253794 PSME2Q9UL46 239 aa13.24□□□□□ -0.29
VPS25-201ENST00000253794 RAXQ9Y2V3 346 aa13.24□□□□□ -0.29
VPS25-201ENST00000253794 HS3ST3B1Q9Y662 390 aa13.24□□□□□ -0.29
VPS25-201ENST00000253794 MRPS18BQ9Y676 258 aaKnown RBP13.24□□□□□ -0.29
VPS25-201ENST00000253794 CFAP47Q6ZTR5 3102 aa13.24□□□□□ -0.29
VPS25-201ENST00000253794 A0A0G2JND7 137 aa13.23□□□□□ -0.29
VPS25-201ENST00000253794 ZNF891A8MT65 544 aaPredicted RBP13.23□□□□□ -0.29
VPS25-201ENST00000253794 SOCS6O14544 535 aa13.23□□□□□ -0.29
VPS25-201ENST00000253794 SCAMP2O15127 329 aaKnown RBP13.23□□□□□ -0.29
VPS25-201ENST00000253794 PRKRAO75569 313 aaKnown RBP13.23□□□□□ -0.29
VPS25-201ENST00000253794 CDC123O75794 336 aaPredicted RBP13.23□□□□□ -0.29
VPS25-201ENST00000253794 MAOAP21397 527 aa13.23□□□□□ -0.29
VPS25-201ENST00000253794 ARFIP2P53365 341 aa13.23□□□□□ -0.29
VPS25-201ENST00000253794 FOLH1Q04609 750 aa13.23□□□□□ -0.29
VPS25-201ENST00000253794 C2orf80Q0P641 193 aa13.23□□□□□ -0.29
VPS25-201ENST00000253794 SLC13A2Q13183 592 aa13.23□□□□□ -0.29
VPS25-201ENST00000253794 SRSF6Q13247 344 aaKnown RBP13.23□□□□□ -0.29
VPS25-201ENST00000253794 NSDHLQ15738 373 aa13.23□□□□□ -0.29
VPS25-201ENST00000253794 FAM69BQ5VUD6 431 aa13.23□□□□□ -0.29
VPS25-201ENST00000253794 R3HCC1LQ7Z5L2 792 aaKnown RBP13.23□□□□□ -0.29
VPS25-201ENST00000253794 ANKRD37Q7Z713 158 aa13.23□□□□□ -0.29
VPS25-201ENST00000253794 MRGPREQ86SM8 312 aa13.23□□□□□ -0.29
VPS25-201ENST00000253794 RAB43Q86YS6 212 aa13.23□□□□□ -0.29
VPS25-201ENST00000253794 PRSS58Q8IYP2 241 aa13.23□□□□□ -0.29
VPS25-201ENST00000253794 MMP21Q8N119 569 aa13.23□□□□□ -0.29
VPS25-201ENST00000253794 OR4K14Q8NGD5 310 aa13.23□□□□□ -0.29
VPS25-201ENST00000253794 METTL21AQ8WXB1 218 aa13.23□□□□□ -0.29
VPS25-201ENST00000253794 TSLPQ969D9 159 aa13.23□□□□□ -0.29
VPS25-201ENST00000253794 UCN3Q969E3 161 aa13.23□□□□□ -0.29
VPS25-201ENST00000253794 TESCQ96BS2 214 aa13.23□□□□□ -0.29
VPS25-201ENST00000253794 NAF1Q96HR8 494 aaKnown RBP13.23□□□□□ -0.29
VPS25-201ENST00000253794 ZNF681Q96N22 645 aa13.23□□□□□ -0.29
VPS25-201ENST00000253794 PELOQ9BRX2 385 aaKnown RBP13.23□□□□□ -0.29
VPS25-201ENST00000253794 ZNF700Q9H0M5 742 aa13.23□□□□□ -0.29
VPS25-201ENST00000253794 EPN3Q9H201 632 aa13.23□□□□□ -0.29
VPS25-201ENST00000253794 ZNF385DQ9H6B1 395 aa13.23□□□□□ -0.29
VPS25-201ENST00000253794 ZIM2Q9NZV7 527 aa13.23□□□□□ -0.29
VPS25-201ENST00000253794 OR2W5A6NFC9 320 aa13.22□□□□□ -0.29
VPS25-201ENST00000253794 GLOD5A6NK44 160 aa13.22□□□□□ -0.29
VPS25-201ENST00000253794 SNX3O60493 162 aa13.22□□□□□ -0.29
VPS25-201ENST00000253794 LDB3O75112 727 aa13.22□□□□□ -0.29
VPS25-201ENST00000253794 SLC35E2P0CK97 266 aa13.22□□□□□ -0.29
VPS25-201ENST00000253794 DDX5P17844 614 aaKnown RBP13.22□□□□□ -0.29
VPS25-201ENST00000253794 HPCAL1P37235 193 aa13.22□□□□□ -0.29
VPS25-201ENST00000253794 FRKP42685 505 aaPredicted RBP13.22□□□□□ -0.29
VPS25-201ENST00000253794 STT3AP46977 705 aa13.22□□□□□ -0.29
VPS25-201ENST00000253794 CLNS1AP54105 237 aaKnown RBP13.22□□□□□ -0.29
VPS25-201ENST00000253794 DPY19L1Q2PZI1 675 aa13.22□□□□□ -0.29
VPS25-201ENST00000253794 TMEM198Q66K66 360 aa13.22□□□□□ -0.29
VPS25-201ENST00000253794 KIRREL2Q6UWL6 708 aa13.22□□□□□ -0.29
VPS25-201ENST00000253794 LRRC69Q6ZNQ3 347 aa13.22□□□□□ -0.29
VPS25-201ENST00000253794 SPATA21Q7Z572 469 aa13.22□□□□□ -0.29
VPS25-201ENST00000253794 PIGWQ7Z7B1 504 aa13.22□□□□□ -0.29
VPS25-201ENST00000253794 TICAM1Q8IUC6 712 aa13.22□□□□□ -0.29
VPS25-201ENST00000253794 ST13P4Q8IZP2 240 aaPredicted RBP13.22□□□□□ -0.29
VPS25-201ENST00000253794 NATD1Q8N6N6 113 aa13.22□□□□□ -0.29
VPS25-201ENST00000253794 GLB1L3Q8NCI6 653 aaPredicted RBP13.22□□□□□ -0.29
VPS25-201ENST00000253794 CLHC1Q8NHS4 586 aa13.22□□□□□ -0.29
VPS25-201ENST00000253794 THAP4Q8WY91 577 aa13.22□□□□□ -0.29
VPS25-201ENST00000253794 COQ8BQ96D53 544 aa13.22□□□□□ -0.29
VPS25-201ENST00000253794 THOC1Q96FV9 657 aaKnown RBP13.22□□□□□ -0.29
VPS25-201ENST00000253794 VPS50Q96JG6 964 aa13.22□□□□□ -0.29
VPS25-201ENST00000253794 WDR77Q9BQA1 342 aaPredicted RBP13.22□□□□□ -0.29
VPS25-201ENST00000253794 MIEF1Q9NQG6 463 aa13.22□□□□□ -0.29
VPS25-201ENST00000253794 SLC35C2Q9NQQ7 365 aa13.22□□□□□ -0.29
VPS25-201ENST00000253794 MRGBPQ9NV56 204 aa13.22□□□□□ -0.29
VPS25-201ENST00000253794 UTS2RQ9UKP6 389 aa13.22□□□□□ -0.29
VPS25-201ENST00000253794 PPIEQ9UNP9 301 aaKnown RBP13.22□□□□□ -0.29
VPS25-201ENST00000253794 TRIM33Q9UPN9 1127 aa13.22□□□□□ -0.29
VPS25-201ENST00000253794 URB1O60287 2271 aaKnown RBP13.22□□□□□ -0.29
VPS25-201ENST00000253794 IGHV1-45A0A0A0MS14 117 aa13.21□□□□□ -0.29
VPS25-201ENST00000253794 WASHC1A8K0Z3 465 aa13.21□□□□□ -0.29
VPS25-201ENST00000253794 GABRR3A8MPY1 467 aa13.21□□□□□ -0.29
VPS25-201ENST00000253794 MYO1GB0I1T2 1018 aa13.21□□□□□ -0.29
VPS25-201ENST00000253794 E9PBE3 544 aa13.21□□□□□ -0.29
VPS25-201ENST00000253794 KLHL41O60662 606 aa13.21□□□□□ -0.29
VPS25-201ENST00000253794 ATP1B1P05026 303 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms