RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 HNMTP50135 292 aa11.41□□□□□ -0.58
USHBP1-201ENST00000252597 CSTF1Q05048 431 aaKnown RBP11.41□□□□□ -0.58
USHBP1-201ENST00000252597 ZNF91Q05481 1191 aa11.41□□□□□ -0.58
USHBP1-201ENST00000252597 ZNF763Q0D2J5 394 aa11.41□□□□□ -0.58
USHBP1-201ENST00000252597 CDC20Q12834 499 aa11.41□□□□□ -0.58
USHBP1-201ENST00000252597 VEZF1Q14119 521 aa11.41□□□□□ -0.58
USHBP1-201ENST00000252597 ZNF791Q3KP31 576 aaPredicted RBP11.41□□□□□ -0.58
USHBP1-201ENST00000252597 LYPLAL1Q5VWZ2 237 aa11.41□□□□□ -0.58
USHBP1-201ENST00000252597 ZNF367Q7RTV3 350 aa11.41□□□□□ -0.58
USHBP1-201ENST00000252597 TSEN54Q7Z6J9 526 aaKnown RBP11.41□□□□□ -0.58
USHBP1-201ENST00000252597 TMEM25Q86YD3 366 aa11.41□□□□□ -0.58
USHBP1-201ENST00000252597 LACC1Q8IV20 430 aa11.41□□□□□ -0.58
USHBP1-201ENST00000252597 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.41□□□□□ -0.58
USHBP1-201ENST00000252597 SLC30A8Q8IWU4 369 aa11.41□□□□□ -0.58
USHBP1-201ENST00000252597 COL26A1Q96A83 441 aa11.41□□□□□ -0.58
USHBP1-201ENST00000252597 SCRN2Q96FV2 425 aa11.41□□□□□ -0.58
USHBP1-201ENST00000252597 TMEM80Q96HE8 168 aa11.41□□□□□ -0.58
USHBP1-201ENST00000252597 OPALINQ96PE5 141 aa11.41□□□□□ -0.58
USHBP1-201ENST00000252597 F2RL3Q96RI0 385 aa11.41□□□□□ -0.58
USHBP1-201ENST00000252597 BCL7BQ9BQE9 202 aa11.41□□□□□ -0.58
USHBP1-201ENST00000252597 SLC6A16Q9GZN6 736 aa11.41□□□□□ -0.58
USHBP1-201ENST00000252597 HHATLQ9HCP6 504 aa11.41□□□□□ -0.58
USHBP1-201ENST00000252597 MYO16Q9Y6X6 1858 aa11.41□□□□□ -0.58
USHBP1-201ENST00000252597 HYAL3O43820 417 aaPredicted RBP11.4□□□□□ -0.58
USHBP1-201ENST00000252597 UGT2B17O75795 530 aa11.4□□□□□ -0.58
USHBP1-201ENST00000252597 C1SP09871 688 aa11.4□□□□□ -0.58
USHBP1-201ENST00000252597 NR2F6P10588 404 aa11.4□□□□□ -0.58
USHBP1-201ENST00000252597 ARPC4P59998 168 aa11.4□□□□□ -0.58
USHBP1-201ENST00000252597 RPS7P62081 194 aaKnown RBP11.4□□□□□ -0.58
USHBP1-201ENST00000252597 SEC23BQ15437 767 aa11.4□□□□□ -0.58
USHBP1-201ENST00000252597 ZSWIM7Q19AV6 140 aa11.4□□□□□ -0.58
USHBP1-201ENST00000252597 WSCD2Q2TBF2 565 aa11.4□□□□□ -0.58
USHBP1-201ENST00000252597 ZNF697Q5TEC3 545 aa11.4□□□□□ -0.58
USHBP1-201ENST00000252597 PDZD3Q86UT5 571 aa11.4□□□□□ -0.58
USHBP1-201ENST00000252597 YIPF7Q8N8F6 280 aa11.4□□□□□ -0.58
USHBP1-201ENST00000252597 DENND6BQ8NEG7 585 aa11.4□□□□□ -0.58
USHBP1-201ENST00000252597 ASB15Q8WXK1 588 aa11.4□□□□□ -0.58
USHBP1-201ENST00000252597 TMEM19Q96HH6 336 aa11.4□□□□□ -0.58
USHBP1-201ENST00000252597 MCCC1Q96RQ3 725 aaPredicted RBP11.4□□□□□ -0.58
USHBP1-201ENST00000252597 NELL2Q99435 816 aa11.4□□□□□ -0.58
USHBP1-201ENST00000252597 WFDC6Q9BQY6 131 aa11.4□□□□□ -0.58
USHBP1-201ENST00000252597 KLF16Q9BXK1 252 aaPredicted RBP11.4□□□□□ -0.58
USHBP1-201ENST00000252597 MRPL17Q9NRX2 175 aaKnown RBP11.4□□□□□ -0.58
USHBP1-201ENST00000252597 MAT2BQ9NZL9 334 aa11.4□□□□□ -0.58
USHBP1-201ENST00000252597 SLC25A13Q9UJS0 675 aa11.4□□□□□ -0.58
USHBP1-201ENST00000252597 CLCA2Q9UQC9 943 aa11.4□□□□□ -0.58
USHBP1-201ENST00000252597 HPGDSO60760 199 aa11.4□□□□□ -0.58
USHBP1-201ENST00000252597 SCO1O75880 301 aa11.4□□□□□ -0.58
USHBP1-201ENST00000252597 SEMA3DO95025 777 aa11.4□□□□□ -0.58
USHBP1-201ENST00000252597 MRPL19P49406 292 aaKnown RBP11.4□□□□□ -0.58
USHBP1-201ENST00000252597 RPS25P62851 125 aaKnown RBP11.4□□□□□ -0.58
USHBP1-201ENST00000252597 ELAVL2Q12926 359 aaKnown RBP11.4□□□□□ -0.58
USHBP1-201ENST00000252597 GPAT3Q53EU6 434 aa11.4□□□□□ -0.58
USHBP1-201ENST00000252597 PRR23CQ6ZRP0 262 aa11.4□□□□□ -0.58
USHBP1-201ENST00000252597 ELMOD2Q8IZ81 293 aa11.4□□□□□ -0.58
USHBP1-201ENST00000252597 Q8N402 240 aa11.4□□□□□ -0.58
USHBP1-201ENST00000252597 OR6C4Q8NGE1 309 aa11.4□□□□□ -0.58
USHBP1-201ENST00000252597 KLK6Q92876 244 aa11.4□□□□□ -0.58
USHBP1-201ENST00000252597 CRELD1Q96HD1 420 aa11.4□□□□□ -0.58
USHBP1-201ENST00000252597 SDHCQ99643 169 aaPredicted RBP11.4□□□□□ -0.58
USHBP1-201ENST00000252597 CLSTN3Q9BQT9 956 aa11.4□□□□□ -0.58
USHBP1-201ENST00000252597 GABARAPL1Q9H0R8 117 aa11.4□□□□□ -0.58
USHBP1-201ENST00000252597 CNIH4Q9P003 139 aa11.4□□□□□ -0.58
USHBP1-201ENST00000252597 ENPP4Q9Y6X5 453 aa11.4□□□□□ -0.58
USHBP1-201ENST00000252597 ASCC3Q8N3C0 2202 aaKnown RBP11.4□□□□□ -0.58
USHBP1-201ENST00000252597 DOCK4Q8N1I0 1966 aa11.4□□□□□ -0.58
USHBP1-201ENST00000252597 FAM172BPA6NC97 362 aa11.4□□□□□ -0.59
USHBP1-201ENST00000252597 ANHXE9PGG2 379 aa11.4□□□□□ -0.59
USHBP1-201ENST00000252597 LEFTY1O75610 366 aa11.4□□□□□ -0.59
USHBP1-201ENST00000252597 TOXO94900 526 aa11.4□□□□□ -0.59
USHBP1-201ENST00000252597 YES1P07947 543 aa11.4□□□□□ -0.59
USHBP1-201ENST00000252597 ZDHHC11BP0C7U3 371 aa11.4□□□□□ -0.59
USHBP1-201ENST00000252597 OR12D1P0DN82 309 aa11.4□□□□□ -0.59
USHBP1-201ENST00000252597 ZNF8P17098 575 aaPredicted RBP11.4□□□□□ -0.59
USHBP1-201ENST00000252597 HLA-FP30511 346 aa11.4□□□□□ -0.59
USHBP1-201ENST00000252597 PCGF2P35227 344 aa11.4□□□□□ -0.59
USHBP1-201ENST00000252597 UGT2B10P36537 528 aa11.4□□□□□ -0.59
USHBP1-201ENST00000252597 MAPK12P53778 367 aa11.4□□□□□ -0.59
USHBP1-201ENST00000252597 GRIN2CQ14957 1233 aa11.4□□□□□ -0.59
USHBP1-201ENST00000252597 RAET1GQ6H3X3 334 aa11.4□□□□□ -0.59
USHBP1-201ENST00000252597 C22orf39Q6P5X5 142 aa11.4□□□□□ -0.59
USHBP1-201ENST00000252597 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.4□□□□□ -0.59
USHBP1-201ENST00000252597 NOXA1Q86UR1 476 aa11.4□□□□□ -0.59
USHBP1-201ENST00000252597 OR8J2Q8NGG1 315 aa11.4□□□□□ -0.59
USHBP1-201ENST00000252597 OR52P1PQ8NH57 321 aa11.4□□□□□ -0.59
USHBP1-201ENST00000252597 ZNF461Q8TAF7 563 aa11.4□□□□□ -0.59
USHBP1-201ENST00000252597 SUN5Q8TC36 379 aa11.4□□□□□ -0.59
USHBP1-201ENST00000252597 POF1BQ8WVV4 589 aa11.4□□□□□ -0.59
USHBP1-201ENST00000252597 JPH3Q8WXH2 748 aaPredicted RBP11.4□□□□□ -0.59
USHBP1-201ENST00000252597 PITX2Q99697 317 aa11.4□□□□□ -0.59
USHBP1-201ENST00000252597 EGLN3Q9H6Z9 239 aa11.4□□□□□ -0.59
USHBP1-201ENST00000252597 RDH14Q9HBH5 336 aa11.4□□□□□ -0.59
USHBP1-201ENST00000252597 TET1Q8NFU7 2136 aa11.4□□□□□ -0.59
USHBP1-201ENST00000252597 SPTBP11277 2137 aa11.39□□□□□ -0.59
USHBP1-201ENST00000252597 KCNE1BA0A087WTH5 132 aa11.39□□□□□ -0.59
USHBP1-201ENST00000252597 LATO43561 262 aa11.39□□□□□ -0.59
USHBP1-201ENST00000252597 FCER2P06734 321 aa11.39□□□□□ -0.59
USHBP1-201ENST00000252597 H1F0P07305 194 aaKnown RBP11.39□□□□□ -0.59
USHBP1-201ENST00000252597 HBQ1P09105 142 aa11.39□□□□□ -0.59
USHBP1-201ENST00000252597 ELFN1P0C7U0 828 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms