RNA–Protein interactions for RNA: ENST00000249499.7

HOXD9-201, Transcript of homeobox D9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD9, Length 1,870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD9-201ENST00000249499 EBF1Q9UH73 591 aa21.68■■□□□ 1.06
HOXD9-201ENST00000249499 NDRG4Q9ULP0 352 aaKnown RBP21.68■■□□□ 1.06
HOXD9-201ENST00000249499 OR2A25A4D2G3 310 aa21.67■■□□□ 1.06
HOXD9-201ENST00000249499 TMEM247A6NEH6 219 aa21.67■■□□□ 1.06
HOXD9-201ENST00000249499 BTN3A3O00478 584 aa21.67■■□□□ 1.06
HOXD9-201ENST00000249499 PPM1DO15297 605 aa21.67■■□□□ 1.06
HOXD9-201ENST00000249499 TNFP01375 233 aa21.67■■□□□ 1.06
HOXD9-201ENST00000249499 ANXA8P13928 327 aa21.67■■□□□ 1.06
HOXD9-201ENST00000249499 EEF1B2P24534 225 aaKnown RBP21.67■■□□□ 1.06
HOXD9-201ENST00000249499 DGKEP52429 567 aa21.67■■□□□ 1.06
HOXD9-201ENST00000249499 SMAD4Q13485 552 aaKnown RBP21.67■■□□□ 1.06
HOXD9-201ENST00000249499 MEP1AQ16819 746 aa21.67■■□□□ 1.06
HOXD9-201ENST00000249499 TJAP1Q5JTD0 557 aa21.67■■□□□ 1.06
HOXD9-201ENST00000249499 TSPYL5Q86VY4 417 aaPredicted RBP21.67■■□□□ 1.06
HOXD9-201ENST00000249499 NRROSQ86YC3 692 aa21.67■■□□□ 1.06
HOXD9-201ENST00000249499 OR4C15Q8NGM1 316 aa21.67■■□□□ 1.06
HOXD9-201ENST00000249499 OR8K5Q8NH50 307 aa21.67■■□□□ 1.06
HOXD9-201ENST00000249499 CCL4L1Q8NHW4 92 aa21.67■■□□□ 1.06
HOXD9-201ENST00000249499 FLVCR1-AS1Q8TAF5 88 aa21.67■■□□□ 1.06
HOXD9-201ENST00000249499 GPBAR1Q8TDU6 330 aa21.67■■□□□ 1.06
HOXD9-201ENST00000249499 GIPC3Q8TF64 312 aa21.67■■□□□ 1.06
HOXD9-201ENST00000249499 RIBC2Q9H4K1 309 aa21.67■■□□□ 1.06
HOXD9-201ENST00000249499 POLR1BQ9H9Y6 1135 aa21.67■■□□□ 1.06
HOXD9-201ENST00000249499 SLC24A3Q9HC58 644 aa21.67■■□□□ 1.06
HOXD9-201ENST00000249499 KLK4Q9Y5K2 254 aa21.67■■□□□ 1.06
HOXD9-201ENST00000249499 PLXND1Q9Y4D7 1925 aa21.67■■□□□ 1.06
HOXD9-201ENST00000249499 A0A0G2JN53 185 aa21.66■■□□□ 1.06
HOXD9-201ENST00000249499 H3BQ06 376 aaPredicted RBP21.66■■□□□ 1.06
HOXD9-201ENST00000249499 XCR1P46094 333 aa21.66■■□□□ 1.06
HOXD9-201ENST00000249499 YAP1P46937 504 aaKnown RBP21.66■■□□□ 1.06
HOXD9-201ENST00000249499 PXNP49023 591 aaPredicted RBP21.66■■□□□ 1.06
HOXD9-201ENST00000249499 HMGA2P52926 109 aa21.66■■□□□ 1.06
HOXD9-201ENST00000249499 CTU2Q2VPK5 515 aaKnown RBP21.66■■□□□ 1.06
HOXD9-201ENST00000249499 KIAA0895LQ68EN5 471 aa21.66■■□□□ 1.06
HOXD9-201ENST00000249499 GALNT5Q7Z7M9 940 aa21.66■■□□□ 1.06
HOXD9-201ENST00000249499 MAGED4Q96JG8 741 aa21.66■■□□□ 1.06
HOXD9-201ENST00000249499 BBS4Q96RK4 519 aa21.66■■□□□ 1.06
HOXD9-201ENST00000249499 SLC2A4RGQ9NR83 387 aa21.66■■□□□ 1.06
HOXD9-201ENST00000249499 POT1Q9NUX5 634 aa21.66■■□□□ 1.06
HOXD9-201ENST00000249499 EXD2Q9NVH0 621 aa21.66■■□□□ 1.06
HOXD9-201ENST00000249499 RAB23Q9ULC3 237 aa21.66■■□□□ 1.06
HOXD9-201ENST00000249499 PNMA8BQ9ULN7 279 aaPredicted RBP21.66■■□□□ 1.06
HOXD9-201ENST00000249499 NAALAD2Q9Y3Q0 740 aa21.66■■□□□ 1.06
HOXD9-201ENST00000249499 ENPP4Q9Y6X5 453 aa21.66■■□□□ 1.06
HOXD9-201ENST00000249499 A0A1W2PR48 441 aa21.66■■□□□ 1.06
HOXD9-201ENST00000249499 OR5K4A6NMS3 321 aa21.66■■□□□ 1.06
HOXD9-201ENST00000249499 C4orf51C9J302 202 aa21.66■■□□□ 1.06
HOXD9-201ENST00000249499 HMGN4O00479 90 aa21.66■■□□□ 1.06
HOXD9-201ENST00000249499 B4GALT2O60909 372 aa21.66■■□□□ 1.06
HOXD9-201ENST00000249499 HOXB3P14651 431 aaPredicted RBP21.66■■□□□ 1.06
HOXD9-201ENST00000249499 IL7RP16871 459 aa21.66■■□□□ 1.06
HOXD9-201ENST00000249499 RHCEP18577 417 aa21.66■■□□□ 1.06
HOXD9-201ENST00000249499 CLK3P49761 638 aaKnown RBP21.66■■□□□ 1.06
HOXD9-201ENST00000249499 CDK5R2Q13319 367 aa21.66■■□□□ 1.06
HOXD9-201ENST00000249499 RAPSNQ13702 412 aa21.66■■□□□ 1.06
HOXD9-201ENST00000249499 TUBA3CQ13748 450 aa21.66■■□□□ 1.06
HOXD9-201ENST00000249499 LAPTM4AQ15012 233 aa21.66■■□□□ 1.06
HOXD9-201ENST00000249499 CEBPEQ15744 281 aa21.66■■□□□ 1.06
HOXD9-201ENST00000249499 FAM180BQ6P0A1 224 aa21.66■■□□□ 1.06
HOXD9-201ENST00000249499 SLC48A1Q6P1K1 146 aa21.66■■□□□ 1.06
HOXD9-201ENST00000249499 ASPGQ86U10 573 aa21.66■■□□□ 1.06
HOXD9-201ENST00000249499 FAM174AQ8TBP5 190 aa21.66■■□□□ 1.06
HOXD9-201ENST00000249499 TMEM19Q96HH6 336 aa21.66■■□□□ 1.06
HOXD9-201ENST00000249499 PIP5K1AQ99755 562 aa21.66■■□□□ 1.06
HOXD9-201ENST00000249499 APOBEC3BQ9UH17 382 aaKnown RBP21.66■■□□□ 1.06
HOXD9-201ENST00000249499 ENTPD4Q9Y227 616 aa21.66■■□□□ 1.06
HOXD9-201ENST00000249499 FAM32AQ9Y421 112 aaKnown RBP21.66■■□□□ 1.06
HOXD9-201ENST00000249499 ENTPD2Q9Y5L3 495 aa21.66■■□□□ 1.06
HOXD9-201ENST00000249499 GMPPBQ9Y5P6 360 aa21.66■■□□□ 1.06
HOXD9-201ENST00000249499 MYO10Q9HD67 2058 aa21.65■■□□□ 1.06
HOXD9-201ENST00000249499 ARRDC5A6NEK1 342 aa21.65■■□□□ 1.06
HOXD9-201ENST00000249499 SLC1A7O00341 560 aa21.65■■□□□ 1.06
HOXD9-201ENST00000249499 SH3BP5O60239 455 aa21.65■■□□□ 1.06
HOXD9-201ENST00000249499 BCHEP06276 602 aa21.65■■□□□ 1.06
HOXD9-201ENST00000249499 IGHV4-34P06331 123 aa21.65■■□□□ 1.06
HOXD9-201ENST00000249499 ASGR2P07307 311 aa21.65■■□□□ 1.06
HOXD9-201ENST00000249499 GPC1P35052 558 aa21.65■■□□□ 1.06
HOXD9-201ENST00000249499 POLR2IP36954 125 aaKnown RBP21.65■■□□□ 1.06
HOXD9-201ENST00000249499 NUP107P57740 925 aa21.65■■□□□ 1.06
HOXD9-201ENST00000249499 DYNC1I2Q13409 638 aaKnown RBP21.65■■□□□ 1.06
HOXD9-201ENST00000249499 PRRT3Q5FWE3 981 aa21.65■■□□□ 1.06
HOXD9-201ENST00000249499 TNFAIP8L2Q6P589 184 aaPredicted RBP21.65■■□□□ 1.06
HOXD9-201ENST00000249499 VN1R4Q7Z5H5 301 aa21.65■■□□□ 1.06
HOXD9-201ENST00000249499 ZNF605Q86T29 641 aa21.65■■□□□ 1.06
HOXD9-201ENST00000249499 ERI1Q8IV48 349 aaKnown RBP21.65■■□□□ 1.06
HOXD9-201ENST00000249499 SLC35G5Q96KT7 338 aa21.65■■□□□ 1.06
HOXD9-201ENST00000249499 ZNF607Q96SK3 696 aa21.65■■□□□ 1.06
HOXD9-201ENST00000249499 GSDMCQ9BYG8 508 aa21.65■■□□□ 1.06
HOXD9-201ENST00000249499 CXorf21Q9HAI6 301 aa21.65■■□□□ 1.06
HOXD9-201ENST00000249499 LTB4R2Q9NPC1 389 aa21.65■■□□□ 1.06
HOXD9-201ENST00000249499 PRDM9Q9NQV7 894 aa21.65■■□□□ 1.06
HOXD9-201ENST00000249499 PRDM6Q9NQX0 595 aa21.65■■□□□ 1.06
HOXD9-201ENST00000249499 GIMAP4Q9NUV9 329 aa21.65■■□□□ 1.06
HOXD9-201ENST00000249499 P2RX2Q9UBL9 471 aa21.65■■□□□ 1.06
HOXD9-201ENST00000249499 CES1P1Q9UKY3 287 aa21.65■■□□□ 1.06
HOXD9-201ENST00000249499 ATG4BQ9Y4P1 393 aa21.65■■□□□ 1.06
HOXD9-201ENST00000249499 PRAMEF10O60809 474 aa21.64■■□□□ 1.06
HOXD9-201ENST00000249499 AIFM1O95831 613 aa21.64■■□□□ 1.06
HOXD9-201ENST00000249499 IFNW1P05000 195 aa21.64■■□□□ 1.06
HOXD9-201ENST00000249499 SLC5A2P31639 672 aa21.64■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms