RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 CYP4Z1Q86W10 505 aa22.03■■□□□ 1.12
MSX2-201ENST00000239243 SETD9Q8NE22 299 aa22.03■■□□□ 1.12
MSX2-201ENST00000239243 SFXN5Q8TD22 340 aa22.03■■□□□ 1.12
MSX2-201ENST00000239243 MOAP1Q96BY2 351 aa22.03■■□□□ 1.12
MSX2-201ENST00000239243 RAB23Q9ULC3 237 aa22.03■■□□□ 1.12
MSX2-201ENST00000239243 MRPS17Q9Y2R5 130 aaKnown RBP22.03■■□□□ 1.12
MSX2-201ENST00000239243 RRM2P31350 389 aa22.02■■□□□ 1.12
MSX2-201ENST00000239243 HLCSP50747 726 aa22.02■■□□□ 1.12
MSX2-201ENST00000239243 DAPP51397 102 aa22.02■■□□□ 1.12
MSX2-201ENST00000239243 SH3BGRP55822 239 aaPredicted RBP22.02■■□□□ 1.12
MSX2-201ENST00000239243 UBE2IP63279 158 aaKnown RBP22.02■■□□□ 1.12
MSX2-201ENST00000239243 COL13A1Q5TAT6 717 aaPredicted RBP22.02■■□□□ 1.12
MSX2-201ENST00000239243 ANKRD34AQ69YU3 496 aa22.02■■□□□ 1.12
MSX2-201ENST00000239243 SLC38A5Q8WUX1 472 aa22.02■■□□□ 1.12
MSX2-201ENST00000239243 HDAC2Q92769 488 aaKnown RBP22.02■■□□□ 1.12
MSX2-201ENST00000239243 SLC35G5Q96KT7 338 aa22.02■■□□□ 1.12
MSX2-201ENST00000239243 ZNF300Q96RE9 604 aaPredicted RBP22.02■■□□□ 1.12
MSX2-201ENST00000239243 RBM38Q9H0Z9 239 aaKnown RBP22.02■■□□□ 1.12
MSX2-201ENST00000239243 PSME2Q9UL46 239 aa22.02■■□□□ 1.12
MSX2-201ENST00000239243 DUSP12Q9UNI6 340 aa22.02■■□□□ 1.12
MSX2-201ENST00000239243 KLK4Q9Y5K2 254 aa22.02■■□□□ 1.12
MSX2-201ENST00000239243 ERAL1O75616 437 aaKnown RBP22.02■■□□□ 1.11
MSX2-201ENST00000239243 BCHEP06276 602 aa22.02■■□□□ 1.11
MSX2-201ENST00000239243 FZD2Q14332 565 aa22.02■■□□□ 1.11
MSX2-201ENST00000239243 ZNF691Q5VV52 312 aa22.02■■□□□ 1.11
MSX2-201ENST00000239243 TAF8Q7Z7C8 310 aa22.02■■□□□ 1.11
MSX2-201ENST00000239243 ATG16L2Q8NAA4 619 aa22.02■■□□□ 1.11
MSX2-201ENST00000239243 UCN3Q969E3 161 aa22.02■■□□□ 1.11
MSX2-201ENST00000239243 TM4SF19Q96DZ7 209 aa22.02■■□□□ 1.11
MSX2-201ENST00000239243 KLHDC7BQ96G42 594 aa22.02■■□□□ 1.11
MSX2-201ENST00000239243 SYNPO2LQ9H987 977 aa22.02■■□□□ 1.11
MSX2-201ENST00000239243 BLOC1S6Q9UL45 172 aa22.02■■□□□ 1.11
MSX2-201ENST00000239243 PCDHGA8Q9Y5G5 932 aa22.02■■□□□ 1.11
MSX2-201ENST00000239243 SNX11Q9Y5W9 270 aa22.02■■□□□ 1.11
MSX2-201ENST00000239243 COMMD3-BMI1R4GMX3 469 aa22.02■■□□□ 1.11
MSX2-201ENST00000239243 BCKDKO14874 412 aa22.01■■□□□ 1.11
MSX2-201ENST00000239243 PROM1O43490 865 aa22.01■■□□□ 1.11
MSX2-201ENST00000239243 TFPTP0C1Z6 253 aa22.01■■□□□ 1.11
MSX2-201ENST00000239243 RYKP34925 604 aa22.01■■□□□ 1.11
MSX2-201ENST00000239243 RPS26P62854 115 aaKnown RBP22.01■■□□□ 1.11
MSX2-201ENST00000239243 BTN3A2P78410 334 aa22.01■■□□□ 1.11
MSX2-201ENST00000239243 KEAP1Q14145 624 aa22.01■■□□□ 1.11
MSX2-201ENST00000239243 SUZ12Q15022 739 aaKnown RBP22.01■■□□□ 1.11
MSX2-201ENST00000239243 FBXO42Q6P3S6 717 aa22.01■■□□□ 1.11
MSX2-201ENST00000239243 FAHD1Q6P587 224 aa22.01■■□□□ 1.11
MSX2-201ENST00000239243 FIGLAQ6QHK4 219 aa22.01■■□□□ 1.11
MSX2-201ENST00000239243 TRIM73Q86UV7 250 aa22.01■■□□□ 1.11
MSX2-201ENST00000239243 PARGQ86W56 976 aa22.01■■□□□ 1.11
MSX2-201ENST00000239243 RBM12BQ8IXT5 1001 aaKnown RBP22.01■■□□□ 1.11
MSX2-201ENST00000239243 ZNF687Q8N1G0 1237 aa22.01■■□□□ 1.11
MSX2-201ENST00000239243 RASSF5Q8WWW0 418 aa22.01■■□□□ 1.11
MSX2-201ENST00000239243 NCSTNQ92542 709 aa22.01■■□□□ 1.11
MSX2-201ENST00000239243 OR2A5Q96R48 311 aa22.01■■□□□ 1.11
MSX2-201ENST00000239243 BARD1Q99728 777 aaKnown RBP22.01■■□□□ 1.11
MSX2-201ENST00000239243 TCEAL2Q9H3H9 227 aaPredicted RBP22.01■■□□□ 1.11
MSX2-201ENST00000239243 KRT84Q9NSB2 600 aa22.01■■□□□ 1.11
MSX2-201ENST00000239243 ZCCHC3Q9NUD5 404 aaKnown RBP22.01■■□□□ 1.11
MSX2-201ENST00000239243 P2RX2Q9UBL9 471 aa22.01■■□□□ 1.11
MSX2-201ENST00000239243 CCDC160A6NGH7 325 aa22■■□□□ 1.11
MSX2-201ENST00000239243 HMGN4O00479 90 aa22■■□□□ 1.11
MSX2-201ENST00000239243 CSNK2A2P19784 350 aaPredicted RBP22■■□□□ 1.11
MSX2-201ENST00000239243 ZNF10P21506 573 aaPredicted RBP22■■□□□ 1.11
MSX2-201ENST00000239243 GSTT1P30711 240 aa22■■□□□ 1.11
MSX2-201ENST00000239243 TOP3AQ13472 1001 aaPredicted RBP22■■□□□ 1.11
MSX2-201ENST00000239243 KCT2Q8NC54 265 aa22■■□□□ 1.11
MSX2-201ENST00000239243 CAMKVQ8NCB2 501 aa22■■□□□ 1.11
MSX2-201ENST00000239243 TMEM19Q96HH6 336 aa22■■□□□ 1.11
MSX2-201ENST00000239243 CES1P1Q9UKY3 287 aa22■■□□□ 1.11
MSX2-201ENST00000239243 CA14Q9ULX7 337 aa22■■□□□ 1.11
MSX2-201ENST00000239243 HSPE1-MOB4S4R3N1 261 aa22■■□□□ 1.11
MSX2-201ENST00000239243 GLOD5A6NK44 160 aa22■■□□□ 1.11
MSX2-201ENST00000239243 TNFRSF11BO00300 401 aa22■■□□□ 1.11
MSX2-201ENST00000239243 PGRMC2O15173 223 aa22■■□□□ 1.11
MSX2-201ENST00000239243 B4GALT2O60909 372 aa22■■□□□ 1.11
MSX2-201ENST00000239243 DNAJB5O75953 348 aa22■■□□□ 1.11
MSX2-201ENST00000239243 ELK4P28324 431 aa22■■□□□ 1.11
MSX2-201ENST00000239243 MPIP34949 423 aa22■■□□□ 1.11
MSX2-201ENST00000239243 LAPTM4AQ15012 233 aa22■■□□□ 1.11
MSX2-201ENST00000239243 CCDC85BQ15834 202 aaPredicted RBP22■■□□□ 1.11
MSX2-201ENST00000239243 SZRD1Q7Z422 152 aa22■■□□□ 1.11
MSX2-201ENST00000239243 UTP15Q8TED0 518 aaKnown RBP22■■□□□ 1.11
MSX2-201ENST00000239243 SLC37A2Q8TED4 501 aa22■■□□□ 1.11
MSX2-201ENST00000239243 ZNF607Q96SK3 696 aa22■■□□□ 1.11
MSX2-201ENST00000239243 PHF11Q9UIL8 331 aa22■■□□□ 1.11
MSX2-201ENST00000239243 FAM32AQ9Y421 112 aaKnown RBP22■■□□□ 1.11
MSX2-201ENST00000239243 LYVE1Q9Y5Y7 322 aa22■■□□□ 1.11
MSX2-201ENST00000239243 VILLO15195 856 aa21.99■■□□□ 1.11
MSX2-201ENST00000239243 ZNF888P0CJ79 500 aaPredicted RBP21.99■■□□□ 1.11
MSX2-201ENST00000239243 PPP2R1BP30154 601 aa21.99■■□□□ 1.11
MSX2-201ENST00000239243 BUD31P41223 144 aaPredicted RBP21.99■■□□□ 1.11
MSX2-201ENST00000239243 KHKP50053 298 aa21.99■■□□□ 1.11
MSX2-201ENST00000239243 KCNC4Q03721 635 aa21.99■■□□□ 1.11
MSX2-201ENST00000239243 FCRL6Q6DN72 434 aa21.99■■□□□ 1.11
MSX2-201ENST00000239243 TSEN54Q7Z6J9 526 aaKnown RBP21.99■■□□□ 1.11
MSX2-201ENST00000239243 GALNT5Q7Z7M9 940 aa21.99■■□□□ 1.11
MSX2-201ENST00000239243 OR56A1Q8NGH5 318 aa21.99■■□□□ 1.11
MSX2-201ENST00000239243 PATE1Q8WXA2 126 aa21.99■■□□□ 1.11
MSX2-201ENST00000239243 CNRIP1Q96F85 164 aaPredicted RBP21.99■■□□□ 1.11
MSX2-201ENST00000239243 FCRL4Q96PJ5 515 aa21.99■■□□□ 1.11
MSX2-201ENST00000239243 SERINC2Q96SA4 455 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms