RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 BIRC2Q13490 618 aa12.5□□□□□ -0.41
SLIRP-201ENST00000238688 NR1D2Q14995 579 aa12.5□□□□□ -0.41
SLIRP-201ENST00000238688 C14orf28Q4W4Y0 310 aa12.5□□□□□ -0.41
SLIRP-201ENST00000238688 FAM98BQ52LJ0 330 aaKnown RBP12.5□□□□□ -0.41
SLIRP-201ENST00000238688 INTS11Q5TA45 600 aaKnown RBP12.5□□□□□ -0.41
SLIRP-201ENST00000238688 GLYATQ6IB77 296 aa12.5□□□□□ -0.41
SLIRP-201ENST00000238688 TMEM64Q6YI46 380 aa12.5□□□□□ -0.41
SLIRP-201ENST00000238688 ZNF621Q6ZSS3 439 aa12.5□□□□□ -0.41
SLIRP-201ENST00000238688 ARL14Q8N4G2 192 aa12.5□□□□□ -0.41
SLIRP-201ENST00000238688 METTL25Q8N6Q8 603 aa12.5□□□□□ -0.41
SLIRP-201ENST00000238688 OR4A15Q8NGL6 344 aa12.5□□□□□ -0.41
SLIRP-201ENST00000238688 OR10A6Q8NH74 314 aa12.5□□□□□ -0.41
SLIRP-201ENST00000238688 CDC26Q8NHZ8 85 aa12.5□□□□□ -0.41
SLIRP-201ENST00000238688 SNIP1Q8TAD8 396 aaKnown RBP12.5□□□□□ -0.41
SLIRP-201ENST00000238688 ADAMTS18Q8TE60 1221 aa12.5□□□□□ -0.41
SLIRP-201ENST00000238688 ZFP90Q8TF47 636 aa12.5□□□□□ -0.41
SLIRP-201ENST00000238688 DNAJC9Q8WXX5 260 aa12.5□□□□□ -0.41
SLIRP-201ENST00000238688 NCLNQ969V3 563 aa12.5□□□□□ -0.41
SLIRP-201ENST00000238688 BBC3Q96PG8 261 aaPredicted RBP12.5□□□□□ -0.41
SLIRP-201ENST00000238688 DPH2Q9BQC3 489 aaPredicted RBP12.5□□□□□ -0.41
SLIRP-201ENST00000238688 OSBPL10Q9BXB5 764 aa12.5□□□□□ -0.41
SLIRP-201ENST00000238688 NPLQ9BXD5 320 aaPredicted RBP12.5□□□□□ -0.41
SLIRP-201ENST00000238688 KLHL4Q9C0H6 718 aa12.5□□□□□ -0.41
SLIRP-201ENST00000238688 TMEM38AQ9H6F2 299 aa12.5□□□□□ -0.41
SLIRP-201ENST00000238688 LYRM4Q9HD34 91 aa12.5□□□□□ -0.41
SLIRP-201ENST00000238688 LHX9Q9NQ69 397 aa12.5□□□□□ -0.41
SLIRP-201ENST00000238688 PRDM7Q9NQW5 492 aa12.5□□□□□ -0.41
SLIRP-201ENST00000238688 GIMAP4Q9NUV9 329 aa12.5□□□□□ -0.41
SLIRP-201ENST00000238688 RIMS3Q9UJD0 308 aa12.5□□□□□ -0.41
SLIRP-201ENST00000238688 RPS6KA6Q9UK32 745 aa12.5□□□□□ -0.41
SLIRP-201ENST00000238688 SAMD4AQ9UPU9 718 aaKnown RBP12.5□□□□□ -0.41
SLIRP-201ENST00000238688 EXO1Q9UQ84 846 aaKnown RBP12.5□□□□□ -0.41
SLIRP-201ENST00000238688 SLC22A7Q9Y694 548 aa12.5□□□□□ -0.41
SLIRP-201ENST00000238688 AK5Q9Y6K8 562 aa12.5□□□□□ -0.41
SLIRP-201ENST00000238688 SPACA6W5XKT8 324 aa12.5□□□□□ -0.41
SLIRP-201ENST00000238688 BAHCC1Q9P281 2608 aa12.49□□□□□ -0.41
SLIRP-201ENST00000238688 TCRBV5S2A0A599 114 aa12.49□□□□□ -0.41
SLIRP-201ENST00000238688 CPED1A4D0V7 1026 aa12.49□□□□□ -0.41
SLIRP-201ENST00000238688 B4DGG1 531 aa12.49□□□□□ -0.41
SLIRP-201ENST00000238688 NOBOXO60393 691 aa12.49□□□□□ -0.41
SLIRP-201ENST00000238688 CSO75390 466 aaKnown RBP12.49□□□□□ -0.41
SLIRP-201ENST00000238688 UBXN7O94888 489 aa12.49□□□□□ -0.41
SLIRP-201ENST00000238688 SMIM10L1P0DMW3 83 aa12.49□□□□□ -0.41
SLIRP-201ENST00000238688 RAP2AP10114 183 aa12.49□□□□□ -0.41
SLIRP-201ENST00000238688 PNLIPP16233 465 aa12.49□□□□□ -0.41
SLIRP-201ENST00000238688 POLR2CP19387 275 aaPredicted RBP12.49□□□□□ -0.41
SLIRP-201ENST00000238688 MAGP20916 626 aa12.49□□□□□ -0.41
SLIRP-201ENST00000238688 FASP25445 335 aa12.49□□□□□ -0.41
SLIRP-201ENST00000238688 TLX1P31314 330 aaPredicted RBP12.49□□□□□ -0.41
SLIRP-201ENST00000238688 BUD31P41223 144 aaPredicted RBP12.49□□□□□ -0.41
SLIRP-201ENST00000238688 PDX1P52945 283 aa12.49□□□□□ -0.41
SLIRP-201ENST00000238688 PCBP4P57723 403 aaKnown RBP12.49□□□□□ -0.41
SLIRP-201ENST00000238688 SESN3P58005 492 aa12.49□□□□□ -0.41
SLIRP-201ENST00000238688 GPLD1P80108 840 aa12.49□□□□□ -0.41
SLIRP-201ENST00000238688 CYP51A1Q16850 503 aa12.49□□□□□ -0.41
SLIRP-201ENST00000238688 ISXQ2M1V0 245 aa12.49□□□□□ -0.41
SLIRP-201ENST00000238688 SOWAHCQ53LP3 525 aaPredicted RBP12.49□□□□□ -0.41
SLIRP-201ENST00000238688 TOR1AIP1Q5JTV8 583 aa12.49□□□□□ -0.41
SLIRP-201ENST00000238688 ZNF438Q7Z4V0 828 aa12.49□□□□□ -0.41
SLIRP-201ENST00000238688 VN1R4Q7Z5H5 301 aa12.49□□□□□ -0.41
SLIRP-201ENST00000238688 UBE3DQ7Z6J8 389 aa12.49□□□□□ -0.41
SLIRP-201ENST00000238688 IFNEQ86WN2 208 aa12.49□□□□□ -0.41
SLIRP-201ENST00000238688 TICAM1Q8IUC6 712 aa12.49□□□□□ -0.41
SLIRP-201ENST00000238688 SFTPA2Q8IWL1 248 aa12.49□□□□□ -0.41
SLIRP-201ENST00000238688 DTWD1Q8N5C7 304 aa12.49□□□□□ -0.41
SLIRP-201ENST00000238688 EFCAB3Q8N7B9 438 aa12.49□□□□□ -0.41
SLIRP-201ENST00000238688 ACOT4Q8N9L9 421 aa12.49□□□□□ -0.41
SLIRP-201ENST00000238688 C11orf65Q8NCR3 313 aa12.49□□□□□ -0.41
SLIRP-201ENST00000238688 FAM156AQ8NDB6 213 aa12.49□□□□□ -0.41
SLIRP-201ENST00000238688 HIPK4Q8NE63 616 aa12.49□□□□□ -0.41
SLIRP-201ENST00000238688 OR52N2Q8NGI0 321 aa12.49□□□□□ -0.41
SLIRP-201ENST00000238688 SFXN5Q8TD22 340 aa12.49□□□□□ -0.41
SLIRP-201ENST00000238688 GFM2Q969S9 779 aaKnown RBP12.49□□□□□ -0.41
SLIRP-201ENST00000238688 ZDHHC12Q96GR4 267 aa12.49□□□□□ -0.41
SLIRP-201ENST00000238688 TCTN2Q96GX1 697 aa12.49□□□□□ -0.41
SLIRP-201ENST00000238688 SMIM10Q96HG1 83 aa12.49□□□□□ -0.41
SLIRP-201ENST00000238688 DCBLD2Q96PD2 775 aa12.49□□□□□ -0.41
SLIRP-201ENST00000238688 C17orf62Q9BQA9 187 aa12.49□□□□□ -0.41
SLIRP-201ENST00000238688 LRCH1Q9Y2L9 728 aa12.49□□□□□ -0.41
SLIRP-201ENST00000238688 MGAQ8IWI9 3026 aa12.48□□□□□ -0.41
SLIRP-201ENST00000238688 PMS2P1A4D2B8 440 aa12.48□□□□□ -0.41
SLIRP-201ENST00000238688 TLCD2A6NGC4 264 aa12.48□□□□□ -0.41
SLIRP-201ENST00000238688 CXCR6O00574 342 aa12.48□□□□□ -0.41
SLIRP-201ENST00000238688 B3GALT2O43825 422 aa12.48□□□□□ -0.41
SLIRP-201ENST00000238688 DEAF1O75398 565 aaPredicted RBP12.48□□□□□ -0.41
SLIRP-201ENST00000238688 KLHL18O94889 574 aa12.48□□□□□ -0.41
SLIRP-201ENST00000238688 SOX30O94993 753 aa12.48□□□□□ -0.41
SLIRP-201ENST00000238688 IFNA14P01570 189 aa12.48□□□□□ -0.41
SLIRP-201ENST00000238688 ATP6V1C1P21283 382 aa12.48□□□□□ -0.41
SLIRP-201ENST00000238688 OR4D2P58180 307 aa12.48□□□□□ -0.41
SLIRP-201ENST00000238688 YBX1P67809 324 aaKnown RBP12.48□□□□□ -0.41
SLIRP-201ENST00000238688 CHRNB3Q05901 458 aa12.48□□□□□ -0.41
SLIRP-201ENST00000238688 NR0B2Q15466 257 aa12.48□□□□□ -0.41
SLIRP-201ENST00000238688 TCEA2Q15560 299 aa12.48□□□□□ -0.41
SLIRP-201ENST00000238688 TRIP10Q15642 601 aa12.48□□□□□ -0.41
SLIRP-201ENST00000238688 CEBPEQ15744 281 aa12.48□□□□□ -0.41
SLIRP-201ENST00000238688 ZNF630Q2M218 657 aaPredicted RBP12.48□□□□□ -0.41
SLIRP-201ENST00000238688 VMACQ2NL98 169 aa12.48□□□□□ -0.41
SLIRP-201ENST00000238688 TBC1D25Q3MII6 688 aa12.48□□□□□ -0.41
SLIRP-201ENST00000238688 NDUFAF5Q5TEU4 345 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms