RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 HIPK2Q9H2X6 1198 aa12.71□□□□□ -0.37
NEK9-201ENST00000238616 ACTL8Q9H568 366 aa12.71□□□□□ -0.37
NEK9-201ENST00000238616 H0Y8G0 127 aa12.71□□□□□ -0.37
NEK9-201ENST00000238616 J3KR12 359 aa12.71□□□□□ -0.37
NEK9-201ENST00000238616 TMBIM6P55061 237 aa12.71□□□□□ -0.37
NEK9-201ENST00000238616 ZDHHC1Q8WTX9 485 aa12.71□□□□□ -0.37
NEK9-201ENST00000238616 GLYATL1Q969I3 302 aa12.71□□□□□ -0.37
NEK9-201ENST00000238616 KLRG1Q96E93 195 aa12.71□□□□□ -0.37
NEK9-201ENST00000238616 RRNAD1Q96FB5 475 aaKnown RBP12.71□□□□□ -0.37
NEK9-201ENST00000238616 ABRACLQ9P1F3 81 aa12.71□□□□□ -0.37
NEK9-201ENST00000238616 SULT1B1O43704 296 aa12.71□□□□□ -0.38
NEK9-201ENST00000238616 SLC2A1P11166 492 aa12.71□□□□□ -0.38
NEK9-201ENST00000238616 C1orf61Q13536 156 aa12.71□□□□□ -0.38
NEK9-201ENST00000238616 CNKSR3Q6P9H4 555 aa12.71□□□□□ -0.38
NEK9-201ENST00000238616 NCEH1Q6PIU2 408 aa12.71□□□□□ -0.38
NEK9-201ENST00000238616 ZNF619Q8N2I2 560 aa12.71□□□□□ -0.38
NEK9-201ENST00000238616 OR51G2Q8NGK0 314 aa12.71□□□□□ -0.38
NEK9-201ENST00000238616 RAB2BQ8WUD1 216 aa12.71□□□□□ -0.38
NEK9-201ENST00000238616 DNAJC19Q96DA6 116 aa12.71□□□□□ -0.38
NEK9-201ENST00000238616 TSSK6Q9BXA6 273 aa12.71□□□□□ -0.38
NEK9-201ENST00000238616 SERTAD4Q9NUC0 356 aa12.71□□□□□ -0.38
NEK9-201ENST00000238616 DNAJB11Q9UBS4 358 aa12.71□□□□□ -0.38
NEK9-201ENST00000238616 SLC6A6P31641 620 aa12.71□□□□□ -0.38
NEK9-201ENST00000238616 ACVR1BP36896 505 aa12.71□□□□□ -0.38
NEK9-201ENST00000238616 CD97P48960 835 aa12.71□□□□□ -0.38
NEK9-201ENST00000238616 MYLK3Q32MK0 819 aa12.71□□□□□ -0.38
NEK9-201ENST00000238616 RNF111Q6ZNA4 994 aa12.71□□□□□ -0.38
NEK9-201ENST00000238616 THAP4Q8WY91 577 aa12.71□□□□□ -0.38
NEK9-201ENST00000238616 MALSU1Q96EH3 234 aa12.71□□□□□ -0.38
NEK9-201ENST00000238616 GNB4Q9HAV0 340 aa12.71□□□□□ -0.38
NEK9-201ENST00000238616 SARDHQ9UL12 918 aa12.71□□□□□ -0.38
NEK9-201ENST00000238616 CNTN6Q9UQ52 1028 aa12.71□□□□□ -0.38
NEK9-201ENST00000238616 OR2B3O76000 313 aa12.71□□□□□ -0.38
NEK9-201ENST00000238616 PRKCIP41743 596 aa12.71□□□□□ -0.38
NEK9-201ENST00000238616 MAB21L1Q13394 359 aa12.71□□□□□ -0.38
NEK9-201ENST00000238616 GAS6Q14393 721 aa12.71□□□□□ -0.38
NEK9-201ENST00000238616 TPRG1Q6ZUI0 275 aa12.71□□□□□ -0.38
NEK9-201ENST00000238616 CLDN19Q8N6F1 224 aa12.71□□□□□ -0.38
NEK9-201ENST00000238616 ERVK-16P61578 105 aa12.7□□□□□ -0.38
NEK9-201ENST00000238616 BBS1Q8NFJ9 593 aa12.7□□□□□ -0.38
NEK9-201ENST00000238616 OR56A1Q8NGH5 318 aa12.7□□□□□ -0.38
NEK9-201ENST00000238616 FBXL18Q96ME1 805 aa12.7□□□□□ -0.38
NEK9-201ENST00000238616 ZNF541Q9H0D2 1346 aa12.7□□□□□ -0.38
NEK9-201ENST00000238616 FANCMQ8IYD8 2048 aa12.7□□□□□ -0.38
NEK9-201ENST00000238616 ANKRD66B4E2M5 251 aa12.7□□□□□ -0.38
NEK9-201ENST00000238616 EDF1O60869 148 aaKnown RBP12.7□□□□□ -0.38
NEK9-201ENST00000238616 POU6F2P78424 691 aaPredicted RBP12.7□□□□□ -0.38
NEK9-201ENST00000238616 PLCXD2Q0VAA5 305 aa12.7□□□□□ -0.38
NEK9-201ENST00000238616 HNRNPA0Q13151 305 aaKnown RBP12.7□□□□□ -0.38
NEK9-201ENST00000238616 LIPKQ5VXJ0 399 aa12.7□□□□□ -0.38
NEK9-201ENST00000238616 SLC36A4Q6YBV0 504 aa12.7□□□□□ -0.38
NEK9-201ENST00000238616 C16orf78Q8WTQ4 265 aa12.7□□□□□ -0.38
NEK9-201ENST00000238616 ZBTB20Q9HC78 741 aaPredicted RBP12.7□□□□□ -0.38
NEK9-201ENST00000238616 POLE4Q9NR33 117 aa12.7□□□□□ -0.38
NEK9-201ENST00000238616 RAB21Q9UL25 225 aa12.7□□□□□ -0.38
NEK9-201ENST00000238616 RNF11Q9Y3C5 154 aa12.7□□□□□ -0.38
NEK9-201ENST00000238616 ENSAO43768 121 aaKnown RBP12.7□□□□□ -0.38
NEK9-201ENST00000238616 SOX30O94993 753 aa12.7□□□□□ -0.38
NEK9-201ENST00000238616 ZNF81P51508 661 aa12.7□□□□□ -0.38
NEK9-201ENST00000238616 CCNHP51946 323 aaPredicted RBP12.7□□□□□ -0.38
NEK9-201ENST00000238616 OR2T5Q6IEZ7 315 aa12.7□□□□□ -0.38
NEK9-201ENST00000238616 SLC22A16Q86VW1 577 aa12.7□□□□□ -0.38
NEK9-201ENST00000238616 OR2T29Q8NH02 315 aa12.7□□□□□ -0.38
NEK9-201ENST00000238616 ALG3Q92685 438 aa12.7□□□□□ -0.38
NEK9-201ENST00000238616 DOPEY2Q9Y3R5 2298 aa12.7□□□□□ -0.38
NEK9-201ENST00000238616 USP31Q70CQ4 1352 aa12.7□□□□□ -0.38
NEK9-201ENST00000238616 TRBV2A0A0J9YWF9 115 aa12.7□□□□□ -0.38
NEK9-201ENST00000238616 RBM47A0AV96 593 aaKnown RBP12.7□□□□□ -0.38
NEK9-201ENST00000238616 CLEC3BP05452 202 aa12.7□□□□□ -0.38
NEK9-201ENST00000238616 LPLP06858 475 aa12.7□□□□□ -0.38
NEK9-201ENST00000238616 GSTM3P21266 225 aa12.7□□□□□ -0.38
NEK9-201ENST00000238616 CLEC1AQ8NC01 280 aa12.7□□□□□ -0.38
NEK9-201ENST00000238616 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.7□□□□□ -0.38
NEK9-201ENST00000238616 ACTR10Q9NZ32 417 aa12.7□□□□□ -0.38
NEK9-201ENST00000238616 DNAJB9Q9UBS3 223 aa12.7□□□□□ -0.38
NEK9-201ENST00000238616 CLEC4EQ9ULY5 219 aa12.7□□□□□ -0.38
NEK9-201ENST00000238616 EDARQ9UNE0 448 aa12.7□□□□□ -0.38
NEK9-201ENST00000238616 TP53TG5Q9Y2B4 290 aa12.7□□□□□ -0.38
NEK9-201ENST00000238616 TULP2O00295 520 aa12.7□□□□□ -0.38
NEK9-201ENST00000238616 NPHS1O60500 1241 aa12.7□□□□□ -0.38
NEK9-201ENST00000238616 H6PDO95479 791 aa12.7□□□□□ -0.38
NEK9-201ENST00000238616 DUSP3P51452 185 aaPredicted RBP12.7□□□□□ -0.38
NEK9-201ENST00000238616 ZBTB26Q9HCK0 441 aa12.7□□□□□ -0.38
NEK9-201ENST00000238616 CDH10Q9Y6N8 788 aa12.7□□□□□ -0.38
NEK9-201ENST00000238616 CLCA1A8K7I4 914 aa12.7□□□□□ -0.38
NEK9-201ENST00000238616 LOC730098B7Z3J9 87 aa12.7□□□□□ -0.38
NEK9-201ENST00000238616 SERPINA7P05543 415 aa12.7□□□□□ -0.38
NEK9-201ENST00000238616 CDK6Q00534 326 aa12.7□□□□□ -0.38
NEK9-201ENST00000238616 SPRYD7Q5W111 196 aa12.7□□□□□ -0.38
NEK9-201ENST00000238616 SHISA6Q6ZSJ9 500 aa12.7□□□□□ -0.38
NEK9-201ENST00000238616 RPS27LQ71UM5 84 aaKnown RBP12.7□□□□□ -0.38
NEK9-201ENST00000238616 PIP5K1AQ99755 562 aa12.7□□□□□ -0.38
NEK9-201ENST00000238616 RBM24Q9BX46 236 aaKnown RBP12.7□□□□□ -0.38
NEK9-201ENST00000238616 NXF5Q9H1B4 397 aaKnown RBP12.7□□□□□ -0.38
NEK9-201ENST00000238616 A0A087WUU8 490 aa12.69□□□□□ -0.38
NEK9-201ENST00000238616 APLNRP35414 380 aa12.69□□□□□ -0.38
NEK9-201ENST00000238616 ACVRL1P37023 503 aa12.69□□□□□ -0.38
NEK9-201ENST00000238616 GRIA2P42262 883 aa12.69□□□□□ -0.38
NEK9-201ENST00000238616 CHRNEQ04844 493 aa12.69□□□□□ -0.38
NEK9-201ENST00000238616 TMEM198Q66K66 360 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms