RNA–Protein interactions for RNA: ENST00000238112.7

CPSF3-201, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-201ENST00000238112 RTCAO00442 366 aaKnown RBP17.8■□□□□ 0.44
CPSF3-201ENST00000238112 FAAHO00519 579 aa17.8■□□□□ 0.44
CPSF3-201ENST00000238112 LZTS3O60299 673 aaPredicted RBP17.8■□□□□ 0.44
CPSF3-201ENST00000238112 PRNPP04156 253 aa17.8■□□□□ 0.44
CPSF3-201ENST00000238112 H1F0P07305 194 aaKnown RBP17.8■□□□□ 0.44
CPSF3-201ENST00000238112 CD72P21854 359 aa17.8■□□□□ 0.44
CPSF3-201ENST00000238112 XKP51811 444 aa17.8■□□□□ 0.44
CPSF3-201ENST00000238112 EPHA5P54756 1037 aa17.8■□□□□ 0.44
CPSF3-201ENST00000238112 PRMT2P55345 433 aa17.8■□□□□ 0.44
CPSF3-201ENST00000238112 HSPB3Q12988 150 aa17.8■□□□□ 0.44
CPSF3-201ENST00000238112 HEPACAMQ14CZ8 416 aa17.8■□□□□ 0.44
CPSF3-201ENST00000238112 SEC23BQ15437 767 aa17.8■□□□□ 0.44
CPSF3-201ENST00000238112 SLX4IPQ5VYV7 408 aa17.8■□□□□ 0.44
CPSF3-201ENST00000238112 GDPD3Q7L5L3 318 aa17.8■□□□□ 0.44
CPSF3-201ENST00000238112 FAM129CQ86XR2 697 aa17.8■□□□□ 0.44
CPSF3-201ENST00000238112 NATD1Q8N6N6 113 aa17.8■□□□□ 0.44
CPSF3-201ENST00000238112 FLCNQ8NFG4 579 aa17.8■□□□□ 0.44
CPSF3-201ENST00000238112 OR2L2Q8NH16 312 aa17.8■□□□□ 0.44
CPSF3-201ENST00000238112 RAB8BQ92930 207 aa17.8■□□□□ 0.44
CPSF3-201ENST00000238112 OTUB2Q96DC9 234 aa17.8■□□□□ 0.44
CPSF3-201ENST00000238112 TMEM80Q96HE8 168 aa17.8■□□□□ 0.44
CPSF3-201ENST00000238112 CCDC32Q9BV29 185 aa17.8■□□□□ 0.44
CPSF3-201ENST00000238112 FZD3Q9NPG1 666 aa17.8■□□□□ 0.44
CPSF3-201ENST00000238112 DYRK4Q9NR20 520 aa17.8■□□□□ 0.44
CPSF3-201ENST00000238112 POU2F3Q9UKI9 436 aa17.8■□□□□ 0.44
CPSF3-201ENST00000238112 ALPK3Q96L96 1907 aa17.79■□□□□ 0.44
CPSF3-201ENST00000238112 SPINT1O43278 529 aa17.79■□□□□ 0.44
CPSF3-201ENST00000238112 MMP20O60882 483 aa17.79■□□□□ 0.44
CPSF3-201ENST00000238112 CKMT1AP12532 417 aa17.79■□□□□ 0.44
CPSF3-201ENST00000238112 DDX5P17844 614 aaKnown RBP17.79■□□□□ 0.44
CPSF3-201ENST00000238112 KELP23276 732 aa17.79■□□□□ 0.44
CPSF3-201ENST00000238112 TIE1P35590 1138 aa17.79■□□□□ 0.44
CPSF3-201ENST00000238112 SOX3P41225 446 aa17.79■□□□□ 0.44
CPSF3-201ENST00000238112 DEFB115Q30KQ5 88 aa17.79■□□□□ 0.44
CPSF3-201ENST00000238112 KHDRBS2Q5VWX1 349 aaKnown RBP17.79■□□□□ 0.44
CPSF3-201ENST00000238112 TCTN3Q6NUS6 607 aa17.79■□□□□ 0.44
CPSF3-201ENST00000238112 C17orf64Q86WR6 236 aa17.79■□□□□ 0.44
CPSF3-201ENST00000238112 ADGRF3Q8IZF5 1079 aa17.79■□□□□ 0.44
CPSF3-201ENST00000238112 OR5AR1Q8NGP9 310 aa17.79■□□□□ 0.44
CPSF3-201ENST00000238112 TEFMQ96QE5 360 aaKnown RBP17.79■□□□□ 0.44
CPSF3-201ENST00000238112 ASPNQ9BXN1 380 aa17.79■□□□□ 0.44
CPSF3-201ENST00000238112 HHATLQ9HCP6 504 aa17.79■□□□□ 0.44
CPSF3-201ENST00000238112 SEMA3GQ9NS98 782 aa17.79■□□□□ 0.44
CPSF3-201ENST00000238112 KLHL3Q9UH77 587 aa17.79■□□□□ 0.44
CPSF3-201ENST00000238112 RPL36Q9Y3U8 105 aaKnown RBP17.79■□□□□ 0.44
CPSF3-201ENST00000238112 DYRK3O43781 588 aa17.78■□□□□ 0.44
CPSF3-201ENST00000238112 SEMA3DO95025 777 aa17.78■□□□□ 0.44
CPSF3-201ENST00000238112 RB1P06400 928 aa17.78■□□□□ 0.44
CPSF3-201ENST00000238112 IGFBP1P08833 259 aaPredicted RBP17.78■□□□□ 0.44
CPSF3-201ENST00000238112 GSTT2P0CG29 244 aa17.78■□□□□ 0.44
CPSF3-201ENST00000238112 GSTT2BP0CG30 244 aa17.78■□□□□ 0.44
CPSF3-201ENST00000238112 C6P13671 934 aa17.78■□□□□ 0.44
CPSF3-201ENST00000238112 DOC2BQ14184 412 aa17.78■□□□□ 0.44
CPSF3-201ENST00000238112 SPHARQ15513 63 aa17.78■□□□□ 0.44
CPSF3-201ENST00000238112 LRIT3Q3SXY7 679 aa17.78■□□□□ 0.44
CPSF3-201ENST00000238112 C6orf120Q7Z4R8 191 aa17.78■□□□□ 0.44
CPSF3-201ENST00000238112 ST13P5Q8NFI4 369 aaPredicted RBP17.78■□□□□ 0.44
CPSF3-201ENST00000238112 TM4SF18Q96CE8 201 aa17.78■□□□□ 0.44
CPSF3-201ENST00000238112 F2RL3Q96RI0 385 aa17.78■□□□□ 0.44
CPSF3-201ENST00000238112 ZNF607Q96SK3 696 aa17.78■□□□□ 0.44
CPSF3-201ENST00000238112 MND1Q9BWT6 205 aa17.78■□□□□ 0.44
CPSF3-201ENST00000238112 RACGAP1Q9H0H5 632 aa17.78■□□□□ 0.44
CPSF3-201ENST00000238112 ABCG4Q9H172 646 aa17.78■□□□□ 0.44
CPSF3-201ENST00000238112 POLR2J3Q9H1A7 115 aaKnown RBP17.78■□□□□ 0.44
CPSF3-201ENST00000238112 C3orf14Q9HBI5 128 aa17.78■□□□□ 0.44
CPSF3-201ENST00000238112 SMURF1Q9HCE7 757 aa17.78■□□□□ 0.44
CPSF3-201ENST00000238112 ERVK13-1Q9NX77 482 aa17.78■□□□□ 0.44
CPSF3-201ENST00000238112 RBMX2Q9Y388 322 aaKnown RBP17.78■□□□□ 0.44
CPSF3-201ENST00000238112 PDE4DIPQ5VU43 2346 aa17.78■□□□□ 0.44
CPSF3-201ENST00000238112 RGS5O15539 181 aa17.78■□□□□ 0.44
CPSF3-201ENST00000238112 FKTNO75072 461 aa17.78■□□□□ 0.44
CPSF3-201ENST00000238112 CSO75390 466 aaKnown RBP17.78■□□□□ 0.44
CPSF3-201ENST00000238112 PAPLNO95428 1278 aa17.78■□□□□ 0.44
CPSF3-201ENST00000238112 PSMA1P25786 263 aaKnown RBP17.78■□□□□ 0.44
CPSF3-201ENST00000238112 CASP3P42574 277 aa17.78■□□□□ 0.44
CPSF3-201ENST00000238112 TMEM201Q5SNT2 666 aa17.78■□□□□ 0.44
CPSF3-201ENST00000238112 ZNF765Q7L2R6 523 aa17.78■□□□□ 0.44
CPSF3-201ENST00000238112 RASSF5Q8WWW0 418 aa17.78■□□□□ 0.44
CPSF3-201ENST00000238112 ZNF354BQ96LW1 612 aa17.78■□□□□ 0.44
CPSF3-201ENST00000238112 RNF208Q9H0X6 261 aa17.78■□□□□ 0.44
CPSF3-201ENST00000238112 C14orf119Q9NWQ9 140 aa17.78■□□□□ 0.44
CPSF3-201ENST00000238112 SEC14L3Q9UDX4 400 aa17.78■□□□□ 0.44
CPSF3-201ENST00000238112 NDOR1Q9UHB4 597 aa17.78■□□□□ 0.44
CPSF3-201ENST00000238112 TAC3Q9UHF0 121 aa17.78■□□□□ 0.44
CPSF3-201ENST00000238112 CLEC2DQ9UHP7 191 aa17.78■□□□□ 0.44
CPSF3-201ENST00000238112 GPR34Q9UPC5 381 aa17.78■□□□□ 0.44
CPSF3-201ENST00000238112 WBP11Q9Y2W2 641 aaKnown RBP17.78■□□□□ 0.44
CPSF3-201ENST00000238112 LSM2Q9Y333 95 aaKnown RBP17.78■□□□□ 0.44
CPSF3-201ENST00000238112 HCFC2Q9Y5Z7 792 aa17.78■□□□□ 0.44
CPSF3-201ENST00000238112 CAPN5O15484 640 aaPredicted RBP17.77■□□□□ 0.44
CPSF3-201ENST00000238112 VASPP50552 380 aaPredicted RBP17.77■□□□□ 0.44
CPSF3-201ENST00000238112 SMIM11AP58511 58 aa17.77■□□□□ 0.44
CPSF3-201ENST00000238112 NCF4Q15080 339 aa17.77■□□□□ 0.44
CPSF3-201ENST00000238112 C12orf73Q69YU5 71 aa17.77■□□□□ 0.44
CPSF3-201ENST00000238112 GDPGP1Q6ZNW5 385 aa17.77■□□□□ 0.44
CPSF3-201ENST00000238112 FAM83HQ6ZRV2 1179 aaPredicted RBP17.77■□□□□ 0.44
CPSF3-201ENST00000238112 OR8H2Q8N162 312 aa17.77■□□□□ 0.44
CPSF3-201ENST00000238112 ZNF296Q8WUU4 475 aaPredicted RBP17.77■□□□□ 0.44
CPSF3-201ENST00000238112 AIF1LQ9BQI0 150 aa17.77■□□□□ 0.44
CPSF3-201ENST00000238112 C5AR2Q9P296 337 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms